Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C02p33150 Brassica napus HOM05D000689 ORTHO05D000015 2.6e-80 302.0 153 100.0
BraA02t07087Z Brassica rapa HOM05D000689 ORTHO05D000015 3.7e-74 281.6 162 91.4
A02p20610 Brassica napus HOM05D000689 ORTHO05D000015 9.1e-73 276.9 162 89.5
C02p33100 Brassica napus HOM05D000689 ORTHO05D000015 1.5e-72 276.2 162 89.5
BraA02t07091Z Brassica rapa HOM05D000689 ORTHO05D000015 7.9e-69 263.8 199 74.4
BraA02t07095Z Brassica rapa HOM05D000689 ORTHO05D000015 3.0e-68 261.9 199 73.9
BraA09t38386Z Brassica rapa HOM05D000689 ORTHO05D000015 1.1e-67 260.0 199 73.4
BolC2t09386H Brassica oleracea HOM05D000689 ORTHO05D000015 2.6e-67 258.8 199 72.9
BcaB05g24984 Brassica carinata HOM05D000689 ORTHO05D000015 6.8e-44 181.0 185 60.0
BcaC03g15665 Brassica carinata HOM05D000689 ORTHO05D000015 5.2e-36 154.8 126 65.9
AL1G55020 Arabidopsis lyrata HOM05D000689 ORTHO05D000015 3.0e-23 112.5 177 46.9
A08p05370 Brassica napus HOM05D000689 ORTHO05D000015 2.5e-22 109.4 195 42.6
AL1G25030 Arabidopsis lyrata HOM05D000689 ORTHO05D000015 3.3e-22 109.0 206 40.3
BraA08t32542Z Brassica rapa HOM05D000689 ORTHO05D000015 3.3e-22 109.0 195 42.6
AL1G25040 Arabidopsis lyrata HOM05D000689 ORTHO05D000015 2.8e-21 105.9 209 38.8
C08p05790 Brassica napus HOM05D000689 ORTHO05D000015 1.4e-20 103.6 186 43.0
C08p05810 Brassica napus HOM05D000689 ORTHO05D000015 1.4e-20 103.6 186 43.0
Carub.0001s3702 Capsella rubella HOM05D000689 ORTHO05D000015 1.2e-19 100.5 197 41.6
C07p05870 Brassica napus HOM05D000689 ORTHO05D000015 1.5e-19 100.1 174 39.7
BolC7t40991H Brassica oleracea HOM05D000689 ORTHO05D000015 1.5e-19 100.1 174 39.7
AT1G48400 Arabidopsis thaliana HOM05D000689 ORTHO05D000015 2.0e-19 99.8 195 41.5
AL1G54370 Arabidopsis lyrata HOM05D000689 ORTHO05D000015 2.9e-18 95.9 200 38.5
Thhalv10012238m.g Eutrema salsugineum HOM05D000689 ORTHO05D000015 2.9e-18 95.9 205 37.1
AL6G23340 Arabidopsis lyrata HOM05D000689 ORTHO05D000015 6.4e-18 94.7 207 39.6
Thhalv10013291m.g Eutrema salsugineum HOM05D000689 ORTHO05D000015 1.4e-17 93.6 211 39.8
BolC8t47424H Brassica oleracea HOM05D000689 ORTHO05D000015 1.9e-17 93.2 186 40.9
BcaC07g37186 Brassica carinata HOM05D000689 ORTHO05D000015 7.1e-17 91.3 173 41.0
BcaC09g51340 Brassica carinata HOM05D000689 ORTHO05D000015 1.2e-16 90.5 183 42.1
A03p19160 Brassica napus HOM05D000689 ORTHO05D000015 3.5e-16 89.0 197 38.1
BcaB01g06363 Brassica carinata HOM05D000689 ORTHO05D000015 4.6e-16 88.6 195 37.4
BolC4t21701H Brassica oleracea HOM05D000689 ORTHO05D000015 4.6e-16 88.6 196 37.2
BcaC06g31360 Brassica carinata HOM05D000689 ORTHO05D000015 1.0e-15 87.4 215 37.2
BolC4t22009H Brassica oleracea HOM05D000689 ORTHO05D000015 3.9e-15 85.5 169 44.4
A10p21080 Brassica napus HOM05D000689 ORTHO05D000015 6.6e-15 84.7 206 36.4
BraA10t44173Z Brassica rapa HOM05D000689 ORTHO05D000015 6.6e-15 84.7 206 36.4
C04p00680 Brassica napus HOM05D000689 ORTHO05D000015 1.1e-14 84.0 200 35.5
BcaC09g51335 Brassica carinata HOM05D000689 ORTHO05D000015 1.5e-14 83.6 204 38.7
BcaC09g51338 Brassica carinata HOM05D000689 ORTHO05D000015 1.5e-14 83.6 204 38.7
C09p58050 Brassica napus HOM05D000689 ORTHO05D000015 1.5e-14 83.6 207 36.2
BolC9t58670H Brassica oleracea HOM05D000689 ORTHO05D000015 1.5e-14 83.6 207 36.2
BcaC04g18682 Brassica carinata HOM05D000689 ORTHO05D000015 1.9e-14 83.2 207 36.2
BolC8t47432H Brassica oleracea HOM05D000689 ORTHO05D000015 1.9e-14 83.2 112 54.5
BolC9t58682H Brassica oleracea HOM05D000689 ORTHO05D000015 1.9e-14 83.2 207 36.2
CARHR270010 Cardamine hirsuta HOM05D000689 ORTHO05D000015 2.5e-14 82.8 192 37.0
A05p00630 Brassica napus HOM05D000689 ORTHO05D000015 3.3e-14 82.4 196 35.7
Thhalv10025404m.g Eutrema salsugineum HOM05D000689 ORTHO05D000015 5.6e-14 81.6 204 35.3
BraA05t19060Z Brassica rapa HOM05D000689 ORTHO05D000015 7.3e-14 81.3 199 35.2
AT2G29930 Arabidopsis thaliana HOM05D000689 ORTHO05D000015 1.2e-13 80.5 196 39.3
BolC1t01378H Brassica oleracea HOM05D000689 ORTHO05D000015 1.2e-13 80.5 213 37.6
BcaNung01794 Brassica carinata HOM05D000689 ORTHO05D000015 1.6e-13 80.1 209 37.3
BraA10t44873Z Brassica rapa HOM05D000689 ORTHO05D000015 2.8e-13 79.3 203 36.5
BcaC04g18680 Brassica carinata HOM05D000689 ORTHO05D000015 3.6e-13 79.0 182 36.8
BcaC07g40441 Brassica carinata HOM05D000689 ORTHO05D000015 3.6e-13 79.0 151 39.1
A01p12240 Brassica napus HOM05D000689 ORTHO05D000015 3.6e-13 79.0 213 36.2
BraA01t01165Z Brassica rapa HOM05D000689 ORTHO05D000015 4.7e-13 78.6 213 36.2
AL7G25770 Arabidopsis lyrata HOM05D000689 ORTHO05D000015 8.1e-13 77.8 207 35.3
BcaNung02239 Brassica carinata HOM05D000689 ORTHO05D000015 1.4e-12 77.0 199 37.2
Thhalv10025182m.g Eutrema salsugineum HOM05D000689 ORTHO05D000015 1.4e-12 77.0 207 35.7
A10p28240 Brassica napus HOM05D000689 ORTHO05D000015 2.3e-12 76.3 212 34.9
Carub.0006s1098 Capsella rubella HOM05D000689 ORTHO05D000015 3.1e-12 75.9 209 35.9
BcaNung04095 Brassica carinata HOM05D000689 ORTHO05D000015 1.2e-11 73.9 198 35.9
Carub.0005s1509 Capsella rubella HOM05D000689 ORTHO05D000015 1.2e-11 73.9 112 42.0
BcaC07g40394 Brassica carinata HOM05D000689 ORTHO05D000015 2.6e-11 72.8 160 37.5
Carub.0001s3703 Capsella rubella HOM05D000689 ORTHO05D000015 2.6e-11 72.8 203 35.5
BraA01t01243Z Brassica rapa HOM05D000689 ORTHO05D000015 3.4e-11 72.4 211 35.1
AT4G27050 Arabidopsis thaliana HOM05D000689 ORTHO05D000015 7.6e-11 71.2 207 32.9
Thhalv10016490m.g Eutrema salsugineum HOM05D000689 ORTHO05D000015 1.3e-10 70.5 198 35.4
AT5G35995 Arabidopsis thaliana HOM05D000689 ORTHO05D000015 1.7e-10 70.1 193 37.3
BcaB06g28159 Brassica carinata HOM05D000689 ORTHO05D000015 1.7e-10 70.1 198 36.4
Carub.0007s3428 Capsella rubella HOM05D000689 ORTHO05D000015 1.7e-10 70.1 199 36.2
CARHR123070 Cardamine hirsuta HOM05D000689 ORTHO05D000015 1.7e-10 70.1 192 33.9
AL4G24660 Arabidopsis lyrata HOM05D000689 ORTHO05D013451 6.4e-10 68.2 191 36.6
C04p56880 Brassica napus HOM05D000689 ORTHO05D000015 6.4e-10 68.2 200 36.0
BolC4t27222H Brassica oleracea HOM05D000689 ORTHO05D000015 6.4e-10 68.2 200 36.0
BraA05t20468Z Brassica rapa HOM05D000689 ORTHO05D000015 8.4e-10 67.8 182 35.2
AT2G29910 Arabidopsis thaliana HOM05D000689 ORTHO05D000015 1.4e-09 67.0 191 34.0
A04p21060 Brassica napus HOM05D000689 ORTHO05D000015 1.9e-09 66.6 200 35.0
C01p14120 Brassica napus HOM05D000689 ORTHO05D000015 1.9e-09 66.6 91 54.9
BolC4t27399H Brassica oleracea HOM05D000689 ORTHO05D000015 1.9e-09 66.6 193 35.2
BraA04t17675Z Brassica rapa HOM05D000689 ORTHO05D000015 1.9e-09 66.6 200 35.0
Carub.0005s2659 Capsella rubella HOM05D000689 ORTHO05D000015 1.9e-09 66.6 135 38.5
Thhalv10026785m.g Eutrema salsugineum HOM05D000689 ORTHO05D000015 1.9e-09 66.6 200 36.0
AL5G41650 Arabidopsis lyrata HOM05D000689 ORTHO05D000015 3.2e-09 65.9 111 40.5
BcaC02g08067 Brassica carinata HOM05D000689 ORTHO05D000015 4.1e-09 65.5 106 46.2
BcaC07g40395 Brassica carinata HOM05D000689 ORTHO05D000015 4.1e-09 65.5 111 40.5
BolC4t21704H Brassica oleracea HOM05D000689 ORTHO05D000015 4.1e-09 65.5 168 35.7
CARHR123150 Cardamine hirsuta HOM05D000689 ORTHO05D000015 4.1e-09 65.5 199 35.2
BcaC06g36282 Brassica carinata HOM05D000689 ORTHO05D000015 5.4e-09 65.1 121 35.5
AT3G58860 Arabidopsis thaliana HOM05D000689 ORTHO05D000015 7.1e-09 64.7 190 31.6
BcaC09g51333 Brassica carinata HOM05D000689 ORTHO05D000015 7.1e-09 64.7 201 33.8
AL4G20440 Arabidopsis lyrata HOM05D000689 ORTHO05D000015 9.2e-09 64.3 110 41.8
Carub.0005s2634 Capsella rubella HOM05D000689 ORTHO05D000015 9.2e-09 64.3 130 38.5
A09p52220 Brassica napus HOM05D000689 ORTHO05D000015 1.2e-08 63.9 193 31.6
Carub.0004s2516 Capsella rubella HOM05D000689 ORTHO05D000015 1.6e-08 63.5 194 31.4
AL7G46170 Arabidopsis lyrata HOM05D000689 ORTHO05D000015 2.1e-08 63.2 88 47.7
AL1G53180 Arabidopsis lyrata HOM05D000689 ORTHO05D000015 2.7e-08 62.8 193 34.7
AL6G16510 Arabidopsis lyrata HOM05D000689 ORTHO05D000015 2.7e-08 62.8 191 35.6
AT1G64540 Arabidopsis thaliana HOM05D000689 ORTHO05D000015 2.7e-08 62.8 182 34.6
BraA04t17808Z Brassica rapa HOM05D000689 ORTHO05D000015 2.7e-08 62.8 103 46.6
BolC1t03135H Brassica oleracea HOM05D000689 ORTHO05D000015 4.6e-08 62.0 196 35.2
Sp4g12490 Schrenkiella parvula HOM05D000689 ORTHO05D000015 4.6e-08 62.0 187 34.2
AL5G41630 Arabidopsis lyrata HOM05D000689 ORTHO05D000015 6.0e-08 61.6 111 40.5
Carub.0005s2565 Capsella rubella HOM05D000689 ORTHO05D000015 6.0e-08 61.6 199 31.2
AT1G21990 Arabidopsis thaliana HOM05D000689 ORTHO05D000015 1.0e-07 60.8 192 38.0
Thhalv10006459m.g Eutrema salsugineum HOM05D000689 ORTHO05D000015 1.0e-07 60.8 205 32.2
Thhalv10028052m.g Eutrema salsugineum HOM05D000689 ORTHO05D000015 1.7e-07 60.1 194 34.5
AT1G48390 Arabidopsis thaliana HOM05D000689 ORTHO05D000015 3.0e-07 59.3 138 33.3
Carub.0006s1652 Capsella rubella HOM05D000689 ORTHO05D000015 3.0e-07 59.3 112 42.0
BraA07t30086Z Brassica rapa HOM05D000689 ORTHO05D000015 3.9e-07 58.9 196 29.6
BcaB02g07494 Brassica carinata HOM05D000689 ORTHO05D000015 5.1e-07 58.5 195 28.7
AT3G58930 Arabidopsis thaliana HOM05D000689 ORTHO05D000015 6.6e-07 58.2 151 33.8
BcaB01g03146 Brassica carinata HOM05D000689 ORTHO05D000015 6.6e-07 58.2 189 31.2
Carub.0007s3763 Capsella rubella HOM05D000689 ORTHO05D000015 6.6e-07 58.2 111 39.6
Thhalv10006462m.g Eutrema salsugineum HOM05D000689 ORTHO05D000015 6.6e-07 58.2 111 39.6
Thhalv10022030m.g Eutrema salsugineum HOM05D000689 ORTHO05D000015 6.6e-07 58.2 196 32.1
AL5G23270 Arabidopsis lyrata HOM05D000689 ORTHO05D000015 1.1e-06 57.4 113 37.2
AL5G40790 Arabidopsis lyrata HOM05D000689 ORTHO05D000015 1.1e-06 57.4 111 39.6
Thhalv10006004m.g Eutrema salsugineum HOM05D000689 ORTHO05D000015 1.1e-06 57.4 88 44.3
CARHR169290 Cardamine hirsuta HOM05D000689 ORTHO05D000015 1.5e-06 57.0 197 29.4
C09p58180 Brassica napus HOM05D000689 ORTHO05D000015 1.9e-06 56.6 114 42.1
CARHR170010 Cardamine hirsuta HOM05D000689 ORTHO05D000015 1.9e-06 56.6 135 34.1
AL3G24690 Arabidopsis lyrata HOM05D000689 ORTHO05D000015 2.5e-06 56.2 196 32.1
BcaC02g12583 Brassica carinata HOM05D000689 ORTHO05D000015 2.5e-06 56.2 139 30.2
C08p34330 Brassica napus HOM05D000689 ORTHO05D000015 3.3e-06 55.8 182 31.3
AT4G13960 Arabidopsis thaliana HOM05D000689 ORTHO05D000015 5.6e-06 55.1 111 39.6
BolC8t49840H Brassica oleracea HOM05D000689 ORTHO05D041792 5.6e-06 55.1 170 31.2
BraA07t30087Z Brassica rapa HOM05D000689 ORTHO05D000015 5.6e-06 55.1 197 28.4
Carub.0006s0530 Capsella rubella HOM05D000689 ORTHO05D000015 5.6e-06 55.1 199 32.2
Carub.0007s3762 Capsella rubella HOM05D000689 ORTHO05D000015 5.6e-06 55.1 111 38.7
BcaB06g28328 Brassica carinata HOM05D000689 ORTHO05D000015 7.3e-06 54.7 187 33.7
BcaC02g12585 Brassica carinata HOM05D000689 ORTHO05D000015 7.3e-06 54.7 139 29.5
BcaC07g42596 Brassica carinata HOM05D000689 ORTHO05D000015 7.3e-06 54.7 189 28.0
A06p33650 Brassica napus HOM05D000689 ORTHO05D000015 7.3e-06 54.7 114 39.5
BraA06t26300Z Brassica rapa HOM05D000689 ORTHO05D000015 7.3e-06 54.7 114 39.5
CARHR215660 Cardamine hirsuta HOM05D000689 ORTHO05D000015 7.3e-06 54.7 119 39.5
Thhalv10005988m.g Eutrema salsugineum HOM05D000689 ORTHO05D000015 7.3e-06 54.7 108 35.2
PSO384G2878 Papaver somniferum HOM05D000051 ORTHO05D000015 7.3e-06 54.7 178 30.3
AL5G40730 Arabidopsis lyrata HOM05D000689 ORTHO05D000015 9.6e-06 54.3 151 33.8
AT3G44810 Arabidopsis thaliana HOM05D000689 ORTHO05D000015 9.6e-06 54.3 105 39.0
C03p31190 Brassica napus HOM05D000689 ORTHO05D000015 9.6e-06 54.3 102 42.2
Thhalv10006442m.g Eutrema salsugineum HOM05D000689 ORTHO05D000015 9.6e-06 54.3 184 31.0


User provided reference genes

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