Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C02p33110 Brassica napus HOM05D002666 ORTHO05D011316 1.2e-111 406.4 192 100.0
C02p33170 Brassica napus HOM05D002666 ORTHO05D011316 3.1e-86 322.0 189 84.1
BraA02t07090Z Brassica rapa HOM05D002666 ORTHO05D011316 1.5e-80 303.1 170 85.9
BolC2t09385H Brassica oleracea HOM05D002666 ORTHO05D011316 4.3e-80 301.6 169 85.8
C02p33140 Brassica napus HOM05D002666 ORTHO05D011316 8.5e-44 181.0 187 53.5
BcaC03g15657 Brassica carinata HOM05D002666 ORTHO05D011316 3.6e-42 175.6 200 51.5
BolC2t09373H Brassica oleracea HOM05D002666 ORTHO05D011316 3.6e-42 175.6 192 52.6
BcaC03g15664 Brassica carinata HOM05D002666 ORTHO05D011316 6.1e-42 174.9 113 77.9
BcaC03g15663 Brassica carinata HOM05D002666 ORTHO05D011316 1.8e-41 173.3 192 51.6
A02p20540 Brassica napus HOM05D002666 ORTHO05D011316 2.6e-40 169.5 193 50.8
A02p20590 Brassica napus HOM05D002666 ORTHO05D011316 2.6e-40 169.5 193 50.8
BraA02t07093Z Brassica rapa HOM05D002666 ORTHO05D011316 2.6e-40 169.5 193 50.8
BcaC07g40314 Brassica carinata HOM05D002666 ORTHO05D011316 4.4e-40 168.7 185 52.4
BolC2t09384H Brassica oleracea HOM05D002666 ORTHO05D011316 2.2e-39 166.4 207 48.3
BraA02t07089Z Brassica rapa HOM05D002666 ORTHO05D011316 3.7e-39 165.6 205 48.3
BolC8t51029H Brassica oleracea HOM05D002666 ORTHO05D011316 8.2e-39 164.5 207 47.3
C02p33270 Brassica napus HOM05D002666 ORTHO05D011316 1.1e-38 164.1 194 49.5
BcaB05g24980 Brassica carinata HOM05D002666 ORTHO05D011316 1.8e-38 163.3 189 50.8
BraA02t07086Z Brassica rapa HOM05D002666 ORTHO05D011316 4.1e-38 162.2 205 47.3
BcaB05g24978 Brassica carinata HOM05D002666 ORTHO05D011316 2.0e-37 159.8 171 53.2
BraA02t07094Z Brassica rapa HOM05D002666 ORTHO05D011316 2.0e-37 159.8 78 97.4
C08p34310 Brassica napus HOM05D002666 ORTHO05D011316 5.9e-37 158.3 207 46.4
C02p33180 Brassica napus HOM05D002666 ORTHO05D011316 6.5e-36 154.8 184 49.5
BraA09t38385Z Brassica rapa HOM05D002666 ORTHO05D011316 8.5e-36 154.5 78 94.9
BcaB05g24977 Brassica carinata HOM05D002666 ORTHO05D011316 1.9e-35 153.3 185 49.2
A02p20600 Brassica napus HOM05D002666 ORTHO05D011316 7.2e-35 151.4 78 94.9
BcaC03g15649 Brassica carinata HOM05D002666 ORTHO05D011316 1.4e-33 147.1 167 49.7
C02p33130 Brassica napus HOM05D002666 ORTHO05D011316 4.5e-29 132.1 187 44.4
BcaB05g24979 Brassica carinata HOM05D002666 ORTHO05D011316 1.7e-28 130.2 185 44.9
A02p20580 Brassica napus HOM05D002666 ORTHO05D011316 4.4e-24 115.5 147 47.6
Carub.0002s0722 Capsella rubella HOM05D002666 ORTHO05D004769 7.5e-24 114.8 169 37.3
BcaB05g24983 Brassica carinata HOM05D002666 ORTHO05D011316 4.8e-23 112.1 115 53.0
Carub.0004s2120 Capsella rubella HOM05D002666 ORTHO05D011316 2.0e-21 106.7 185 35.1
BraA02t07088Z Brassica rapa HOM05D002666 ORTHO05D011316 1.7e-20 103.6 90 61.1
AL8G27040 Arabidopsis lyrata HOM05D002666 ORTHO05D011316 5.0e-20 102.1 185 34.1
Aa31LG4G17100 Aethionema arabicum HOM05D002666 ORTHO05D004769 7.2e-19 98.2 164 37.8
Aa31LG4G17090 Aethionema arabicum HOM05D002666 ORTHO05D004769 1.6e-18 97.1 172 36.6
Aa31LG8G17520 Aethionema arabicum HOM05D002666 ORTHO05D004769 3.6e-18 95.9 182 35.2
AL4G25770 Arabidopsis lyrata HOM05D002666 ORTHO05D004769 3.0e-17 92.8 195 32.8
Aa31LG8G14950 Aethionema arabicum HOM05D002666 ORTHO05D004769 3.4e-16 89.4 153 36.6
A01p06820 Brassica napus HOM05D002666 ORTHO05D004769 5.7e-16 88.6 172 33.7
BraA01t00634Z Brassica rapa HOM05D002666 ORTHO05D004769 5.7e-16 88.6 173 34.1
Carub.0004s2646 Capsella rubella HOM05D002666 ORTHO05D004769 5.7e-16 88.6 169 32.5
BcaB05g24982 Brassica carinata HOM05D002666 ORTHO05D011316 7.5e-16 88.2 67 61.2
BcaNung03123 Brassica carinata HOM05D002666 ORTHO05D004769 7.5e-16 88.2 171 33.3
Aa31LG11G11580 Aethionema arabicum HOM05D002666 ORTHO05D004769 6.3e-15 85.1 169 33.7
Thhalv10000285m.g Eutrema salsugineum HOM05D002666 ORTHO05D004769 1.4e-14 84.0 199 32.7
Carub.0004s2249 Capsella rubella HOM05D002666 ORTHO05D004769 2.4e-14 83.2 149 32.9
Carub.0006s2550 Capsella rubella HOM05D002666 ORTHO05D004769 2.4e-14 83.2 146 37.7
CARHR135320 Cardamine hirsuta HOM05D002666 ORTHO05D004769 1.2e-13 80.9 151 33.1
Aa31LG8G17540 Aethionema arabicum HOM05D002666 ORTHO05D004769 1.6e-13 80.5 165 32.7
BcaNung03124 Brassica carinata HOM05D002666 ORTHO05D004769 2.7e-13 79.7 168 32.7
C01p07590 Brassica napus HOM05D002666 ORTHO05D004769 3.5e-13 79.3 195 29.2
AL4G37990 Arabidopsis lyrata HOM05D002666 ORTHO05D004769 4.5e-13 79.0 165 33.3
AL4G38020 Arabidopsis lyrata HOM05D002666 ORTHO05D004769 5.9e-13 78.6 165 32.1
BcaB01g00108 Brassica carinata HOM05D002666 ORTHO05D004769 7.8e-13 78.2 149 33.6
BolC1t00739H Brassica oleracea HOM05D002666 ORTHO05D004769 1.0e-12 77.8 199 28.6
CARHR111270 Cardamine hirsuta HOM05D002666 ORTHO05D004769 1.0e-12 77.8 122 35.2
BcaC09g52215 Brassica carinata HOM05D002666 ORTHO05D004769 1.3e-12 77.4 207 28.5
BolC1t00942H Brassica oleracea HOM05D002666 ORTHO05D004769 1.3e-12 77.4 207 28.5
BraA01t00600Z Brassica rapa HOM05D002666 ORTHO05D004769 1.3e-12 77.4 209 29.7
CARHR111260 Cardamine hirsuta HOM05D002666 ORTHO05D004769 1.7e-12 77.0 122 36.1
A01p06350 Brassica napus HOM05D002666 ORTHO05D004769 2.3e-12 76.6 206 28.6
Aa31sc38G80 Aethionema arabicum HOM05D002666 ORTHO05D004769 2.9e-12 76.3 97 43.3
Aa31LG10G8180 Aethionema arabicum HOM05D002666 ORTHO05D004769 6.6e-12 75.1 96 41.7
BolC4t28134H Brassica oleracea HOM05D002666 ORTHO05D004769 1.5e-11 73.9 162 33.3
AL7G22800 Arabidopsis lyrata HOM05D002666 ORTHO05D004769 1.9e-11 73.6 167 31.1
Aa31LG11G11570 Aethionema arabicum HOM05D000011 ORTHO05D000018 2.5e-11 73.2 188 29.8
BcaC07g39854 Brassica carinata HOM05D002666 ORTHO05D004769 2.5e-11 73.2 149 32.9
A04p29060 Brassica napus HOM05D002666 ORTHO05D004769 2.5e-11 73.2 159 33.3
A09p48260 Brassica napus HOM05D002666 ORTHO05D004769 2.5e-11 73.2 149 33.6
C08p30530 Brassica napus HOM05D002666 ORTHO05D004769 2.5e-11 73.2 149 33.6
BolC8t50673H Brassica oleracea HOM05D002666 ORTHO05D004769 2.5e-11 73.2 149 32.9
BraA09t40279Z Brassica rapa HOM05D002666 ORTHO05D004769 2.5e-11 73.2 149 33.6
BraA01t00797Z Brassica rapa HOM05D002666 ORTHO05D004769 5.6e-11 72.0 176 31.2
BcaC07g39850 Brassica carinata HOM05D002666 ORTHO05D004769 9.5e-11 71.2 149 33.6
Thhalv10019458m.g Eutrema salsugineum HOM05D002666 ORTHO05D004769 1.6e-10 70.5 190 31.6
Aa31sc38G60 Aethionema arabicum HOM05D002666 ORTHO05D004769 2.1e-10 70.1 91 41.8
BcaC02g07340 Brassica carinata HOM05D002666 ORTHO05D004769 2.1e-10 70.1 154 32.5
AL7G22830 Arabidopsis lyrata HOM05D002666 ORTHO05D004769 2.8e-10 69.7 162 29.0
C08p30560 Brassica napus HOM05D002666 ORTHO05D004769 2.8e-10 69.7 149 32.9
BcaC09g52209 Brassica carinata HOM05D002666 ORTHO05D004769 3.6e-10 69.3 214 27.6
C01p09850 Brassica napus HOM05D002666 ORTHO05D004769 3.6e-10 69.3 214 27.6
BcaC09g52206 Brassica carinata HOM05D002666 ORTHO05D004769 6.1e-10 68.6 174 30.5
C01p09810 Brassica napus HOM05D002666 ORTHO05D004769 6.1e-10 68.6 235 25.5
C01p09860 Brassica napus HOM05D002666 ORTHO05D004769 6.1e-10 68.6 174 30.5
BolC1t00948H Brassica oleracea HOM05D002666 ORTHO05D004769 6.1e-10 68.6 174 30.5
BraA01t00796Z Brassica rapa HOM05D002666 ORTHO05D004769 6.1e-10 68.6 206 26.7
Carub.0007s2103 Capsella rubella HOM05D002666 ORTHO05D004769 8.0e-10 68.2 66 50.0
A01p08490 Brassica napus HOM05D002666 ORTHO05D004769 1.4e-09 67.4 206 26.7
BolC1t00947H Brassica oleracea HOM05D002666 ORTHO05D004769 1.8e-09 67.0 168 29.8
AL7G22850 Arabidopsis lyrata HOM05D002666 ORTHO05D004769 2.3e-09 66.6 175 30.9
AT4G29550 Arabidopsis thaliana HOM05D002666 ORTHO05D004769 2.3e-09 66.6 173 29.5
BcaC02g07369 Brassica carinata HOM05D002666 ORTHO05D004769 4.0e-09 65.9 165 32.1
C04p31880 Brassica napus HOM05D002666 ORTHO05D004769 4.0e-09 65.9 62 53.2
AT2G20620 Arabidopsis thaliana HOM05D002666 ORTHO05D004769 6.8e-09 65.1 149 32.2
BcaB01g02539 Brassica carinata HOM05D002666 ORTHO05D004769 6.8e-09 65.1 161 29.8
AT4G20095 Arabidopsis thaliana HOM05D002666 ORTHO05D004769 8.9e-09 64.7 75 42.7
CARHR135310 Cardamine hirsuta HOM05D002666 ORTHO05D004769 1.2e-08 64.3 118 34.7
AL3G53700 Arabidopsis lyrata HOM05D002666 ORTHO05D004769 2.0e-08 63.5 172 28.5
Thhalv10024136m.g Eutrema salsugineum HOM05D002666 ORTHO05D004769 2.0e-08 63.5 119 33.6
AL5G23090 Arabidopsis lyrata HOM05D002666 ORTHO05D014834 2.6e-08 63.2 158 30.4
Sp5g20790 Schrenkiella parvula HOM05D002666 ORTHO05D004769 2.6e-08 63.2 61 50.8
AL7G23540 Arabidopsis lyrata HOM05D002666 ORTHO05D004769 4.4e-08 62.4 192 27.1
BraA04t18378Z Brassica rapa HOM05D002666 ORTHO05D004769 4.4e-08 62.4 116 35.3
Aa31LG2G15570 Aethionema arabicum HOM05D002666 ORTHO05D004769 5.8e-08 62.0 175 29.7
Aa31LG2G16630 Aethionema arabicum HOM05D002666 ORTHO05D004769 5.8e-08 62.0 171 30.4
Carub.0007s1098 Capsella rubella HOM05D002666 ORTHO05D004769 5.8e-08 62.0 163 28.8
A03p58500 Brassica napus HOM05D002666 ORTHO05D004769 2.9e-07 59.7 195 26.7
BraA03t14911Z Brassica rapa HOM05D002666 ORTHO05D004769 2.9e-07 59.7 195 26.7
Aa31LG2G19600 Aethionema arabicum HOM05D002666 ORTHO05D004769 1.1e-06 57.8 90 42.2
AT2G20625 Arabidopsis thaliana HOM05D006735 ORTHO05D011963 1.4e-06 57.4 83 32.5


User provided reference genes

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