Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C02p31710 Brassica napus HOM05D014889 ORTHO05D027864 1.1e-55 219.5 101 100.0
BraA07t28777Z Brassica rapa HOM05D014889 ORTHO05D027864 1.3e-19 99.8 101 40.6
BolC2t11346H Brassica oleracea HOM05D014889 ORTHO05D027864 3.2e-18 95.1 72 58.3
C04p42370 Brassica napus HOM05D015892 ORTHO05D009842 1.8e-16 89.4 76 50.0
BolC9t59378H Brassica oleracea HOM05D006289 ORTHO05D017568 1.8e-16 89.4 88 42.0
C04p20510 Brassica napus HOM05D014889 ORTHO05D000013 9.7e-15 83.6 59 59.3
BolC4t26055H Brassica oleracea HOM05D025516 ORTHO05D012204 1.2e-12 76.6 101 29.7
BraA01t02124Z Brassica rapa HOM05D000017 ORTHO05D000013 1.9e-10 69.3 66 40.9
A04p08420 Brassica napus HOM05D014889 ORTHO05D027864 1.2e-09 66.6 59 50.8
A04p22200 Brassica napus HOM05D000017 ORTHO05D000013 1.2e-09 66.6 69 40.6
MBI10_g19609_MAGBIO Magnolia biondii HOM05D000017 ORTHO05D000013 3.6e-09 65.1 101 35.6
BolC9t55045H Brassica oleracea HOM05D008384 ORTHO05D009842 4.7e-09 64.7 41 63.4
MBI17_g01102_MAGBIO Magnolia biondii HOM05D000017 ORTHO05D000013 1.0e-08 63.5 101 32.7
TAR423G0001 Trochodendron aralioides HOM05D000017 ORTHO05D000013 1.0e-08 63.5 99 34.3
MBI14_g41771_MAGBIO Magnolia biondii HOM05D000017 ORTHO05D000013 3.0e-08 62.0 101 32.7
CANSAT25G1251 Cannabis sativa HOM05D000017 ORTHO05D000013 4.0e-08 61.6 103 33.0
MBI16_g37198_MAGBIO Magnolia biondii HOM05D000017 ORTHO05D000013 4.0e-08 61.6 100 32.0
Solyc10g052716.1 Solanum lycopersicum HOM05D000017 ORTHO05D002765 6.7e-08 60.8 90 32.2
CANSAT21G0541 Cannabis sativa HOM05D000017 ORTHO05D000013 8.8e-08 60.5 103 33.0
CANSAT21G1471 Cannabis sativa HOM05D000017 ORTHO05D000013 8.8e-08 60.5 103 33.0
TWI14G0076 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 8.8e-08 60.5 90 33.3
PSO170G5644 Papaver somniferum HOM05D000017 ORTHO05D000013 1.1e-07 60.1 104 30.8
PSO478G0641 Papaver somniferum HOM05D000017 ORTHO05D000013 1.1e-07 60.1 104 29.8
TWI32G1027 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 1.1e-07 60.1 90 31.1
TAR257G0001 Trochodendron aralioides HOM05D000017 ORTHO05D000013 1.1e-07 60.1 100 32.0
TWI74G0037 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 1.5e-07 59.7 90 33.3
TWI74G0899 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 1.5e-07 59.7 90 33.3
CANSAT78G2408 Cannabis sativa HOM05D000017 ORTHO05D000013 2.0e-07 59.3 95 31.6
Oeu041330.1 Olea europaea HOM05D000017 ORTHO05D000013 2.0e-07 59.3 99 32.3
PSO210G1360 Papaver somniferum HOM05D000017 ORTHO05D000013 2.0e-07 59.3 102 32.4
TWI38G2350 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 2.0e-07 59.3 90 33.3
TWI53G1455 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 2.0e-07 59.3 90 33.3
CANSAT01G1186 Cannabis sativa HOM05D000017 ORTHO05D000013 2.6e-07 58.9 90 31.1
CANSAT56G1010 Cannabis sativa HOM05D000017 ORTHO05D000013 2.6e-07 58.9 103 30.1
Sopen10g023510 Solanum pennellii HOM05D000017 ORTHO05D000013 2.6e-07 58.9 90 31.1
MBI16_g06792_MAGBIO Magnolia biondii HOM05D000017 ORTHO05D000013 3.3e-07 58.5 101 30.7
Oeu059246.1 Olea europaea HOM05D012404 ORTHO05D002765 3.3e-07 58.5 99 31.3
TWI53G0460 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 3.3e-07 58.5 90 33.3
TAR511G0005 Trochodendron aralioides HOM05D000017 ORTHO05D000013 4.4e-07 58.2 96 32.3
ATR0598G278 Amborella trichopoda HOM05D000017 ORTHO05D000013 7.5e-07 57.4 103 27.2
BolC6t36480H Brassica oleracea HOM05D000017 ORTHO05D000013 7.5e-07 57.4 101 30.7
CANSAT35G1006 Cannabis sativa HOM05D000017 ORTHO05D000013 7.5e-07 57.4 99 33.3
Oeu030213.1 Olea europaea HOM05D000017 ORTHO05D000013 7.5e-07 57.4 88 33.0
TWI18G0050 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 7.5e-07 57.4 90 28.9
TWI39G0633 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 7.5e-07 57.4 90 28.9
TWI63G0423 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 7.5e-07 57.4 90 28.9
CANSAT01G1220 Cannabis sativa HOM05D000017 ORTHO05D000013 9.7e-07 57.0 99 33.3
CANSAT11G1223 Cannabis sativa HOM05D000017 ORTHO05D000013 9.7e-07 57.0 99 33.3
CANSAT35G0979 Cannabis sativa HOM05D000017 ORTHO05D000013 9.7e-07 57.0 99 33.3
CANSAT54G2057 Cannabis sativa HOM05D000017 ORTHO05D000013 9.7e-07 57.0 99 33.3
MBI18_g16979_MAGBIO Magnolia biondii HOM05D000017 ORTHO05D000013 9.7e-07 57.0 94 33.0
PSO782G1840 Papaver somniferum HOM05D000017 ORTHO05D000013 9.7e-07 57.0 105 31.4
TWI18G0395 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 9.7e-07 57.0 99 29.3
TWI53G1561 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 9.7e-07 57.0 90 32.2
CANSAT01G2166 Cannabis sativa HOM05D000017 ORTHO05D000013 1.3e-06 56.6 94 33.0
CANSAT35G2016 Cannabis sativa HOM05D000017 ORTHO05D000013 1.3e-06 56.6 94 33.0
CANSAT78G0725 Cannabis sativa HOM05D000017 ORTHO05D000013 1.3e-06 56.6 94 30.9
MBI05_g12020_MAGBIO Magnolia biondii HOM05D000017 ORTHO05D000013 1.3e-06 56.6 101 30.7
Oeu016698.1 Olea europaea HOM05D000017 ORTHO05D000013 1.3e-06 56.6 99 31.3
CANSAT01G0081 Cannabis sativa HOM05D000017 ORTHO05D000013 1.7e-06 56.2 99 33.3
CANSAT11G1061 Cannabis sativa HOM05D000017 ORTHO05D000013 1.7e-06 56.2 92 30.4
THA.LOC104809156 Tarenaya hassleriana HOM05D000017 ORTHO05D000013 1.7e-06 56.2 101 28.7
TWI77G0144 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 1.7e-06 56.2 90 26.7
CANSAT35G0454 Cannabis sativa HOM05D000017 ORTHO05D000013 2.2e-06 55.8 102 32.4
MBI14_g28310_MAGBIO Magnolia biondii HOM05D000017 ORTHO05D000013 2.8e-06 55.5 103 32.0
CANSAT21G1475 Cannabis sativa HOM05D000017 ORTHO05D000013 3.7e-06 55.1 103 28.2
CANSAT54G1694 Cannabis sativa HOM05D000017 ORTHO05D000013 3.7e-06 55.1 103 28.2
MBI18_g33668_MAGBIO Magnolia biondii HOM05D000017 ORTHO05D000013 4.8e-06 54.7 103 32.0
Nitab4.5_0007565g0070 Nicotiana tabacum HOM05D000017 ORTHO05D002765 4.8e-06 54.7 90 30.0
Oeu047411.1 Olea europaea HOM05D000017 ORTHO05D000013 4.8e-06 54.7 101 29.7
TWI18G0436 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 4.8e-06 54.7 99 29.3
TWI39G1138 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 4.8e-06 54.7 99 29.3
TWI63G1449 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 4.8e-06 54.7 99 29.3
TWI74G1513 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 4.8e-06 54.7 99 29.3
TWI77G0111 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 4.8e-06 54.7 99 29.3
CANSAT35G1021 Cannabis sativa HOM05D000017 ORTHO05D000013 6.3e-06 54.3 99 31.3
TWI63G0971 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 6.3e-06 54.3 99 29.3
CANSAT54G0083 Cannabis sativa HOM05D010396 ORTHO05D000013 8.2e-06 53.9 99 32.3
CANSAT78G0241 Cannabis sativa HOM05D000017 ORTHO05D000013 8.2e-06 53.9 90 30.0
CANSAT80G2780 Cannabis sativa HOM05D000017 ORTHO05D000013 8.2e-06 53.9 103 28.2


User provided reference genes

Program Settings