Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C02p31060 Brassica napus HOM05D003653 ORTHO05D004249 0.0e+00 1501.1 780 100.0
Sp5g28630 Schrenkiella parvula HOM05D003653 ORTHO05D004249 0.0e+00 1276.2 793 86.5
Thhalv10018146m.g Eutrema salsugineum HOM05D003653 ORTHO05D004249 0.0e+00 1275.4 793 87.0
C06p47610 Brassica napus HOM05D003653 ORTHO05D004249 0.0e+00 1269.2 789 86.9
AL2G33210 Arabidopsis lyrata HOM05D003653 ORTHO05D004249 0.0e+00 1264.6 793 86.1
AT1G73430 Arabidopsis thaliana HOM05D003653 ORTHO05D004249 0.0e+00 1261.5 793 86.0
Carub.0001s3831 Capsella rubella HOM05D003653 ORTHO05D004249 0.0e+00 1259.2 793 86.1
Carub.0002s2017 Capsella rubella HOM05D003653 ORTHO05D004249 0.0e+00 1231.1 855 79.5
BolC6t39799H Brassica oleracea HOM05D003653 ORTHO05D004249 0.0e+00 1219.9 798 84.1
A07p39380 Brassica napus HOM05D003653 ORTHO05D004249 0.0e+00 1219.1 789 84.2
Aa31LG4G3690 Aethionema arabicum HOM05D003653 ORTHO05D004249 0.0e+00 1215.3 785 83.6
THA.LOC104812181 Tarenaya hassleriana HOM05D003653 ORTHO05D004249 0.0e+00 1192.2 793 81.0
CARHR066480 Cardamine hirsuta HOM05D003653 ORTHO05D004249 0.0e+00 1186.0 793 81.8
BraA07t31487Z Brassica rapa HOM05D003653 ORTHO05D004249 0.0e+00 1172.1 798 81.5
BcaC08g46765 Brassica carinata HOM05D003653 ORTHO05D004249 0.0e+00 1133.6 788 80.6
GSVIVG01015003001 Vitis vinifera HOM05D003653 ORTHO05D004249 0.0e+00 1118.6 797 75.7
Thecc.09G069200 Theobroma cacao HOM05D003653 ORTHO05D004249 0.0e+00 1114.4 797 74.8
TAR626G0857 Trochodendron aralioides HOM05D003653 ORTHO05D004249 0.0e+00 1110.1 788 75.3
Dinv11396 Davidia involucrata HOM05D003653 ORTHO05D004249 0.0e+00 1103.6 797 74.7
Gorai.010G095200 Gossypium raimondii HOM05D003653 ORTHO05D004249 0.0e+00 1099.3 798 73.7
COL.COLO4_21195 Corchorus olitorius HOM05D003653 ORTHO05D004249 0.0e+00 1098.6 797 74.7
Gohir.D06G081700 Gossypium hirsutum HOM05D003653 ORTHO05D004249 0.0e+00 1096.6 798 73.6
Ciclev10007512m.g Citrus clementina HOM05D003653 ORTHO05D004249 0.0e+00 1093.6 796 73.9
TWI32G0371 Tripterygium wilfordii HOM05D003653 ORTHO05D004249 0.0e+00 1089.7 796 74.0
Gohir.A06G084400 Gossypium hirsutum HOM05D003653 ORTHO05D004249 0.0e+00 1088.9 798 73.4
Manes.16G089600 Manihot esculenta HOM05D003653 ORTHO05D004249 0.0e+00 1086.2 797 73.4
Atru.chr7.1784 Acer truncatum HOM05D003653 ORTHO05D004249 0.0e+00 1083.9 791 73.7
BolC2t09153H Brassica oleracea HOM05D003653 ORTHO05D004249 0.0e+00 1081.2 735 82.3
CiPaw.07G188300 Carya illinoinensis HOM05D003653 ORTHO05D004249 0.0e+00 1079.3 804 73.5
Hma1.2p1_0179F.1_g079140 Hydrangea macrophylla HOM05D003653 ORTHO05D004249 0.0e+00 1078.9 799 72.7
Prupe.7G190900 Prunus persica HOM05D003653 ORTHO05D004249 0.0e+00 1078.9 795 74.5
Eucgr.C00763 Eucalyptus grandis HOM05D003653 ORTHO05D004249 0.0e+00 1077.8 797 73.3
Gohir.A13G188800 Gossypium hirsutum HOM05D003653 ORTHO05D004249 0.0e+00 1076.6 797 72.8
Potri.010G138900 Populus trichocarpa HOM05D003653 ORTHO05D004249 0.0e+00 1075.8 792 72.7
Cfa000655 Carpinus fangiana HOM05D003653 ORTHO05D004249 2.7e-311 1071.6 788 74.5
Gorai.013G221900 Gossypium raimondii HOM05D003653 ORTHO05D004249 2.7e-311 1071.6 797 72.5
CANSAT56G3945 Cannabis sativa HOM05D003653 ORTHO05D004249 6.4e-311 1070.5 801 73.4
Gohir.D13G195800 Gossypium hirsutum HOM05D003653 ORTHO05D004249 1.1e-310 1069.7 797 72.4
Manes.03G045400 Manihot esculenta HOM05D003653 ORTHO05D004249 1.1e-310 1069.7 797 72.9
Sc18g0002910 Simmondsia chinensis HOM05D003653 ORTHO05D004249 3.1e-310 1068.1 793 72.4
MSTRG.26501 Avicennia marina HOM05D003653 ORTHO05D004249 5.8e-309 1063.9 791 72.4
RcHm_v2.0_Chr2g0096121 Rosa chinensis HOM05D003653 ORTHO05D004249 2.2e-308 1062.0 795 73.6
Glyma.13G114900 Glycine max HOM05D003653 ORTHO05D004249 1.1e-307 1059.7 787 72.3
Glyma.17G045100 Glycine max HOM05D003653 ORTHO05D004249 1.2e-306 1056.2 787 72.2
FAN19G0402 Fragaria x ananassa HOM05D003653 ORTHO05D004249 2.7e-306 1055.0 795 73.0
FvH4_1g09540 Fragaria vesca HOM05D003653 ORTHO05D004249 7.9e-306 1053.5 795 72.8
SalBow5G5324 Salvia bowleyana HOM05D003653 ORTHO05D004249 1.5e-304 1049.3 793 70.5
FAN26G2747 Fragaria x ananassa HOM05D003653 ORTHO05D004249 1.9e-304 1048.9 793 72.6
MD15G1224400 Malus domestica HOM05D003653 ORTHO05D004249 1.9e-304 1048.9 796 72.6
Lalb_Chr13g0299181 Lupinus albus HOM05D003653 ORTHO05D004249 4.3e-304 1047.7 787 71.3
FAN28G1145 Fragaria x ananassa HOM05D003653 ORTHO05D004249 7.4e-304 1047.0 793 72.5
Aqoxy4G00013 Aquilegia oxysepala HOM05D003653 ORTHO05D004249 9.6e-304 1046.6 793 71.6
Aqoxy7G04180 Aquilegia oxysepala HOM05D003653 ORTHO05D004249 9.6e-304 1046.6 793 71.9
Cc06_g12780 Coffea canephora HOM05D003653 ORTHO05D004249 9.6e-304 1046.6 802 70.4
arahy.Tifrunner.gnm1.ann1.H5KB4L Arachis hypogaea HOM05D003653 ORTHO05D004249 1.3e-303 1046.2 787 70.5
FAN23G3130 Fragaria x ananassa HOM05D003653 ORTHO05D004249 1.3e-303 1046.2 793 72.4
QL02p096361 Quercus lobata HOM05D003653 ORTHO05D004249 1.3e-303 1046.2 797 72.0
EL10Ac8g18959 Beta vulgaris HOM05D003653 ORTHO05D004249 2.1e-303 1045.4 782 71.1
Psat4g019560 Pisum sativum HOM05D003653 ORTHO05D004249 2.1e-303 1045.4 787 72.0
Phvul.003G126900 Phaseolus vulgaris HOM05D003653 ORTHO05D004249 1.1e-302 1043.1 787 71.5
CiPaw.08G039100 Carya illinoinensis HOM05D003653 ORTHO05D004249 3.1e-302 1041.6 800 71.8
TPR.G12688 Trifolium pratense HOM05D003653 ORTHO05D004249 1.2e-301 1039.6 787 71.0
SGA_v2.0_scaffold55G19872 Striga asiatica HOM05D003653 ORTHO05D004249 1.3e-300 1036.2 838 68.3
DCAR_028533 Daucus carota HOM05D003653 ORTHO05D004249 6.5e-300 1033.9 800 71.0
Lj4g0027638 Lotus japonicus HOM05D003653 ORTHO05D004249 8.4e-300 1033.5 796 69.8
Medtr4g124570 Medicago truncatula HOM05D003653 ORTHO05D004249 5.5e-299 1030.8 786 70.6
RcHm_v2.0_Chr2g0096281 Rosa chinensis HOM05D003653 ORTHO05D004249 5.5e-299 1030.8 780 73.2
MD02G1104000 Malus domestica HOM05D003653 ORTHO05D004249 7.1e-299 1030.4 794 71.3
Migut.L01598 Erythranthe guttata HOM05D003653 ORTHO05D004249 2.7e-298 1028.5 788 70.9
Ah.09g228870 Amaranthus hybridus HOM05D003653 ORTHO05D004249 4.6e-298 1027.7 793 69.5
vmacro03339 Vaccinium macrocarpon HOM05D003653 ORTHO05D004249 7.9e-298 1026.9 865 66.8
VMungo1215G1873 Vigna mungo HOM05D003653 ORTHO05D004249 7.9e-298 1026.9 769 72.2
MBI13_g01694_MAGBIO Magnolia biondii HOM05D003653 ORTHO05D004249 1.1e-296 1023.1 796 70.0
Sabra10G0107200 Salix brachista HOM05D003653 ORTHO05D004249 3.3e-296 1021.5 783 70.2
PGSC0003DMG400026759 Solanum tuberosum HOM05D003653 ORTHO05D004249 5.7e-296 1020.8 789 69.5
Solyc04g008640.3 Solanum lycopersicum HOM05D003653 ORTHO05D004249 7.4e-296 1020.4 797 69.5
Sopen04g003800 Solanum pennellii HOM05D003653 ORTHO05D004249 9.7e-296 1020.0 789 69.7
Duzib150G1359 Durio zibethinus HOM05D003653 ORTHO05D004249 3.7e-295 1018.1 791 70.5
ECA247G3145 Erigeron canadensis HOM05D003653 ORTHO05D004249 1.8e-294 1015.8 791 68.9
Nitab4.5_0001114g0100 Nicotiana tabacum HOM05D003653 ORTHO05D004249 3.1e-294 1015.0 792 69.6
PSO724G1082 Papaver somniferum HOM05D003653 ORTHO05D004249 2.0e-293 1012.3 800 68.1
Aqoxy1G02116 Aquilegia oxysepala HOM05D003653 ORTHO05D004249 7.6e-293 1010.4 787 70.3
CAN.G137.40 Capsicum annuum HOM05D003653 ORTHO05D004249 1.0e-292 1010.0 797 69.1
Nn8g38522 Nelumbo nucifera HOM05D003653 ORTHO05D004249 1.0e-292 1010.0 796 69.7
ATR0099G047 Amborella trichopoda HOM05D003653 ORTHO05D004249 6.5e-292 1007.3 786 69.2
HanXRQChr11g0323951 Helianthus annuus HOM05D003653 ORTHO05D004249 8.5e-292 1006.9 769 69.3
Hund08907 Selenicereus undatus HOM05D003653 ORTHO05D004249 3.2e-291 1005.0 785 69.9
CsaV3_5G037140 Cucumis sativus L. HOM05D003653 ORTHO05D004249 4.2e-291 1004.6 801 68.7
PSO541G4412 Papaver somniferum HOM05D003653 ORTHO05D004249 2.1e-290 1002.3 783 69.0
Peaxi162Scf00320g00019 Petunia axillaris HOM05D003653 ORTHO05D004249 3.0e-289 998.4 769 70.5
MELO3C022888.2 Cucumis melo HOM05D003653 ORTHO05D004249 1.1e-288 996.5 801 68.5
PSO135G0095 Papaver somniferum HOM05D003653 ORTHO05D004249 1.1e-288 996.5 800 67.4
Sed0017256 Sechium edule HOM05D003653 ORTHO05D004249 1.4e-286 989.6 797 68.6
Duzib187G0285 Durio zibethinus HOM05D003653 ORTHO05D004249 2.4e-286 988.8 718 73.7
Actinidia05573 Actinidia chinensis HOM05D003653 ORTHO05D004249 9.1e-286 986.9 793 68.9
CDE08G1372 Ceratophyllum demersum HOM05D003653 ORTHO05D004249 2.2e-284 982.2 796 67.7
AUR62028329 Chenopodium quinoa HOM05D003653 ORTHO05D004249 9.4e-283 976.9 795 66.8
Oeu028863.2 Olea europaea HOM05D003653 ORTHO05D004249 4.8e-279 964.5 903 60.7
Lj4C921G8 Lonicera japonica HOM05D003653 ORTHO05D004249 1.9e-275 952.6 764 68.6
arahy.Tifrunner.gnm1.ann1.LZJ3ZW Arachis hypogaea HOM05D003653 ORTHO05D004249 2.5e-275 952.2 779 66.6
Rhsim06G0154000 Rhododendron simsii HOM05D003653 ORTHO05D004249 2.7e-274 948.7 995 57.0
Os08g0451000 Oryza sativa ssp. japonica HOM05D003653 ORTHO05D004249 3.6e-274 948.3 793 64.9
Lj6C86G4 Lonicera japonica HOM05D003653 ORTHO05D004249 3.3e-272 941.8 773 67.3
unitig_8.g3535 Utricularia gibba HOM05D003653 ORTHO05D004249 9.4e-267 923.7 792 64.1
FAN26G0928 Fragaria x ananassa HOM05D003653 ORTHO05D004249 5.3e-262 907.9 793 65.2
Lsat_1_v5_gn_9_48260 Lactuca sativa HOM05D003653 ORTHO05D004249 6.1e-258 894.4 794 62.6
AUR62025332 Chenopodium quinoa HOM05D003653 ORTHO05D004249 1.5e-256 889.8 775 64.1
BcaNung06460 Brassica carinata HOM05D003653 ORTHO05D004249 7.5e-256 887.5 544 86.9
HPP92_012790 Vanilla planifolia HOM05D003653 ORTHO05D004249 3.8e-252 875.2 789 61.6
QL02p096254 Quercus lobata HOM05D003653 ORTHO05D004249 8.6e-252 874.0 627 75.4
Mapoly0109s0022 Marchantia polymorpha HOM05D003653 ORTHO05D004249 1.9e-243 846.3 800 58.0
Zm00001eb040740 Zea mays HOM05D003653 ORTHO05D004249 3.2e-238 828.9 679 65.7
Pp3c10_7010 Physcomitrium patens HOM05D003653 ORTHO05D004249 5.0e-236 821.6 792 57.7
Haze_18437 Corylus avellana HOM05D003653 ORTHO05D004249 2.6e-224 782.7 612 72.1
SMO196G0011 Selaginella moellendorffii HOM05D003653 ORTHO05D004249 1.2e-221 773.9 777 55.6
CAN.G2030.2 Capsicum annuum HOM05D003653 ORTHO05D004249 1.5e-216 756.9 601 68.4
CBR_g20391 Chara braunii HOM05D003653 ORTHO05D004249 1.0e-183 647.9 873 44.6
Pp3c14_9870 Physcomitrium patens HOM05D003653 ORTHO05D004249 1.8e-180 637.1 786 46.7
Haze_06172 Corylus avellana HOM05D003653 ORTHO05D004249 6.3e-178 628.6 742 52.4
ClCG08G005060 Citrullus lanatus HOM05D003653 ORTHO05D004249 3.6e-173 612.8 707 55.0
Sopen07g006320 Solanum pennellii HOM05D003653 ORTHO05D004249 1.1e-171 607.8 580 60.3
Cpa.g.sc82.47 Carica papaya HOM05D003653 ORTHO05D004249 2.3e-156 557.0 379 77.6
PSO675G3146 Papaver somniferum HOM05D003653 ORTHO05D004249 5.3e-145 519.2 448 65.2
CSS0022852 Camellia sinensis var. sinensis HOM05D003653 ORTHO05D004249 5.9e-144 515.8 372 72.8
Cre03.g203750 Chlamydomonas reinhardtii HOM05D003653 ORTHO05D004249 3.7e-130 469.9 971 34.4
ECA232G2537 Erigeron canadensis HOM05D003653 ORTHO05D004249 5.4e-129 466.1 517 53.6
CAN.G1364.1 Capsicum annuum HOM05D003653 ORTHO05D004249 2.1e-112 411.0 429 58.0
Lj6A103G48 Lonicera japonica HOM05D003653 ORTHO05D004249 3.5e-112 410.2 358 62.3
Haze_16164 Corylus avellana HOM05D003653 ORTHO05D004249 3.4e-107 393.7 397 57.7
SEGI_38760 Sequoiadendron giganteum HOM05D003653 ORTHO05D004249 2.7e-104 384.0 314 66.6
Lj6C103G5 Lonicera japonica HOM05D003653 ORTHO05D004249 7.3e-102 375.9 465 52.5
PRCOL_00003556 Prasinoderma coloniale HOM05D003653 ORTHO05D004249 1.2e-91 342.0 849 31.4
Solyc07g017520.4 Solanum lycopersicum HOM05D003653 ORTHO05D004249 5.8e-83 313.2 219 71.2
CSS0010075 Camellia sinensis var. sinensis HOM05D003653 ORTHO05D004249 4.9e-82 310.1 203 82.8
CDE09G1393 Ceratophyllum demersum HOM05D003653 ORTHO05D004249 1.9e-78 298.1 224 68.3
Solyc07g017530.4 Solanum lycopersicum HOM05D003653 ORTHO05D004249 1.6e-77 295.0 217 70.0
TAR383G1054 Trochodendron aralioides HOM05D003653 ORTHO05D004249 5.1e-71 273.5 234 69.2
BraA02t06914Z Brassica rapa HOM05D003653 ORTHO05D004249 1.1e-70 272.3 149 92.6
Nitab4.5_0022446g0010 Nicotiana tabacum HOM05D003653 ORTHO05D004249 7.4e-62 243.0 213 63.8
SEGI_20709 Sequoiadendron giganteum HOM05D003653 ORTHO05D004249 1.0e-58 232.6 196 63.8
TAR383G0849 Trochodendron aralioides HOM05D003653 ORTHO05D004249 5.0e-58 230.3 201 62.7
Haze_06171 Corylus avellana HOM05D003653 ORTHO05D004249 6.5e-58 229.9 151 83.4
Nitab4.5_0000055g0040 Nicotiana tabacum HOM05D003653 ORTHO05D004249 1.6e-56 225.3 196 64.8
ClCG08G005090 Citrullus lanatus HOM05D003653 ORTHO05D004249 2.3e-55 221.5 171 68.4
RcHm_v2.0_Chr2g0096141 Rosa chinensis HOM05D003653 ORTHO05D004249 2.8e-53 214.5 131 80.9
Lsat_1_v5_gn_7_58641 Lactuca sativa HOM05D003653 ORTHO05D004249 3.6e-48 197.6 126 84.9
Lsat_1_v5_gn_2_26321 Lactuca sativa HOM05D003653 ORTHO05D004249 2.3e-47 194.9 126 84.1
Lsat_1_v5_gn_2_82101 Lactuca sativa HOM05D003653 ORTHO05D004249 5.1e-47 193.7 126 83.3
Lsat_1_v5_gn_4_28660 Lactuca sativa HOM05D003653 ORTHO05D004249 9.7e-46 189.5 126 83.3
Lsat_1_v5_gn_5_93841 Lactuca sativa HOM05D003653 ORTHO05D004249 1.7e-45 188.7 126 81.7
QL02p096242 Quercus lobata HOM05D003653 ORTHO05D004249 2.2e-45 188.3 171 60.8
Actinidia26999 Actinidia chinensis HOM05D003653 ORTHO05D004249 8.2e-45 186.4 137 75.9
Haze_16166 Corylus avellana HOM05D003653 ORTHO05D004249 6.3e-37 160.2 114 78.9
Lsat_1_v5_gn_7_30301 Lactuca sativa HOM05D003653 ORTHO05D004249 1.4e-36 159.1 97 88.7
QL02p096270 Quercus lobata HOM05D003653 ORTHO05D004249 5.3e-36 157.1 133 64.7
SEGI_20750 Sequoiadendron giganteum HOM05D003653 ORTHO05D004249 2.9e-34 151.4 105 70.5
Gorai.013G153500 Gossypium raimondii HOM05D003653 ORTHO05D004249 1.1e-33 149.4 106 75.5
Lsat_1_v5_gn_2_18300 Lactuca sativa HOM05D003653 ORTHO05D004249 2.1e-32 145.2 90 88.9
CiPaw.07G188100 Carya illinoinensis HOM05D003653 ORTHO05D004249 6.8e-31 140.2 118 64.4
Haze_19192 Corylus avellana HOM05D003653 ORTHO05D004249 6.8e-31 140.2 126 65.9
Cfa023740 Carpinus fangiana HOM05D003653 ORTHO05D004249 8.8e-31 139.8 618 23.3
Oeu030621.1 Olea europaea HOM05D003653 ORTHO05D004249 9.8e-30 136.3 136 59.6
CAN.G4608.1 Capsicum annuum HOM05D003653 ORTHO05D004249 8.3e-29 133.3 99 70.7
Gohir.D13G136950 Gossypium hirsutum HOM05D003653 ORTHO05D004249 1.2e-27 129.4 101 69.3
SEGI_01409 Sequoiadendron giganteum HOM05D003653 ORTHO05D004249 3.2e-25 121.3 117 59.0
Nitab4.5_0000055g0010 Nicotiana tabacum HOM05D003653 ORTHO05D004249 8.0e-24 116.7 82 78.0
TAR383G0271 Trochodendron aralioides HOM05D003653 ORTHO05D004249 4.0e-23 114.4 71 81.7
ECA232G0158 Erigeron canadensis HOM05D003653 ORTHO05D004249 8.8e-23 113.2 94 58.5
CSS0010583 Camellia sinensis var. sinensis HOM05D003653 ORTHO05D004249 1.2e-19 102.8 66 75.8
Sopen07g006330 Solanum pennellii HOM05D000004 ORTHO05D000002 1.6e-19 102.4 93 61.3
CSS0016569 Camellia sinensis var. sinensis HOM05D003653 ORTHO05D004249 1.0e-18 99.8 93 62.4
CAN.G12730.1 Capsicum annuum HOM05D003653 ORTHO05D004249 7.2e-17 93.6 79 64.6
Lsat_1_v5_gn_6_63001 Lactuca sativa HOM05D003653 ORTHO05D004249 1.0e-15 89.7 50 90.0
Gohir.D08G133700 Gossypium hirsutum HOM05D003653 ORTHO05D004249 1.3e-13 82.8 53 75.5
CSS0022673 Camellia sinensis var. sinensis HOM05D003653 ORTHO05D004249 3.7e-13 81.3 38 92.1
Gorai.004G136800 Gossypium raimondii HOM05D003653 ORTHO05D004249 1.1e-12 79.7 53 73.6
CSS0016294 Camellia sinensis var. sinensis HOM05D003653 ORTHO05D004249 2.0e-11 75.5 65 61.5
VMungo1215G0910 Vigna mungo HOM05D003653 ORTHO05D004249 2.7e-11 75.1 107 47.7
Medtr8g018610 Medicago truncatula HOM05D003653 ORTHO05D004249 1.7e-10 72.4 57 61.4
SEGI_27322 Sequoiadendron giganteum HOM05D003653 ORTHO05D004249 1.8e-07 62.4 49 63.3
CSS0016412 Camellia sinensis var. sinensis HOM05D003653 ORTHO05D004249 9.8e-06 56.6 34 67.6


User provided reference genes

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