Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C02p30710 Brassica napus HOM05D005198 ORTHO05D042013 1.9e-122 442.6 227 100.0
BolC2t09126H Brassica oleracea HOM05D005198 ORTHO05D042013 2.0e-121 439.1 227 99.1
A07p29920 Brassica napus HOM05D005198 ORTHO05D006839 1.5e-18 97.4 114 54.4
Sp5g28150 Schrenkiella parvula HOM05D005198 ORTHO05D006839 3.6e-17 92.8 128 53.1
AL2G32950 Arabidopsis lyrata HOM05D005198 ORTHO05D006839 4.7e-17 92.4 113 50.4
BcaC08g45664 Brassica carinata HOM05D005198 ORTHO05D006839 4.7e-17 92.4 107 53.3
C06p34190 Brassica napus HOM05D005198 ORTHO05D006839 4.7e-17 92.4 107 53.3
Thhalv10018413m.g Eutrema salsugineum HOM05D005198 ORTHO05D006839 6.1e-17 92.0 53 83.0
Carub.0002s1997 Capsella rubella HOM05D005198 ORTHO05D006839 8.0e-17 91.7 128 53.1
AT1G73180 Arabidopsis thaliana HOM05D005198 ORTHO05D006839 8.9e-16 88.2 107 50.5
Aa31LG4G3470 Aethionema arabicum HOM05D005198 ORTHO05D006839 1.2e-15 87.8 127 47.2
CARHR066180 Cardamine hirsuta HOM05D005198 ORTHO05D006839 3.4e-15 86.3 130 47.7
CSS0015120 Camellia sinensis var. sinensis HOM05D005198 ORTHO05D006839 3.7e-14 82.8 130 45.4
CSS0046337 Camellia sinensis var. sinensis HOM05D005198 ORTHO05D006839 1.4e-13 80.9 129 45.0
Lj3g0007177 Lotus japonicus HOM05D005198 ORTHO05D006839 2.4e-13 80.1 127 40.9
Lj6g0012253 Lotus japonicus HOM05D005198 ORTHO05D006839 2.4e-13 80.1 127 40.9
Rhsim04G0106800 Rhododendron simsii HOM05D005198 ORTHO05D006839 2.4e-13 80.1 128 46.9
TAR365G0102 Trochodendron aralioides HOM05D005198 ORTHO05D006839 3.2e-13 79.7 136 44.9
FAN28G0627 Fragaria x ananassa HOM05D005198 ORTHO05D006839 4.1e-13 79.3 112 43.8
Lj1g0021010 Lotus japonicus HOM05D005198 ORTHO05D006839 7.0e-13 78.6 127 40.2
Dinv33201 Davidia involucrata HOM05D005198 ORTHO05D006839 1.2e-12 77.8 133 43.6
QL10p055731 Quercus lobata HOM05D005198 ORTHO05D006839 1.2e-12 77.8 69 52.2
RcHm_v2.0_Chr2g0123631 Rosa chinensis HOM05D005198 ORTHO05D006839 1.2e-12 77.8 130 42.3
Medtr4g087280 Medicago truncatula HOM05D005198 ORTHO05D006839 1.6e-12 77.4 63 55.6
Psat7g121400 Pisum sativum HOM05D005198 ORTHO05D006839 1.6e-12 77.4 63 55.6
COL.COLO4_23329 Corchorus olitorius HOM05D005198 ORTHO05D006839 2.0e-12 77.0 84 48.8
Ca_18641_v3 Cicer arietinum L. HOM05D005198 ORTHO05D006839 2.7e-12 76.6 64 53.1
TPR.G23517 Trifolium pratense HOM05D005198 ORTHO05D006839 2.7e-12 76.6 63 55.6
Hma1.2p1_0150F.1_g066860 Hydrangea macrophylla HOM05D005198 ORTHO05D006839 3.5e-12 76.3 114 46.5
Haze_01365 Corylus avellana HOM05D005198 ORTHO05D006839 4.6e-12 75.9 63 57.1
FAN23G1744 Fragaria x ananassa HOM05D005198 ORTHO05D006839 4.6e-12 75.9 130 40.8
Cc03_g14040 Coffea canephora HOM05D005198 ORTHO05D006839 5.9e-12 75.5 68 54.4
Eucgr.L01724 Eucalyptus grandis HOM05D005198 ORTHO05D006839 5.9e-12 75.5 95 45.3
Sabra13G0105600 Salix brachista HOM05D005198 ORTHO05D006839 5.9e-12 75.5 104 46.2
CiPaw.02G100600 Carya illinoinensis HOM05D005198 ORTHO05D006839 7.8e-12 75.1 111 44.1
MD15G1424000 Malus domestica HOM05D005198 ORTHO05D006839 7.8e-12 75.1 127 39.4
DCAR_027526 Daucus carota HOM05D005198 ORTHO05D006839 1.0e-11 74.7 129 41.1
FvH4_1g25500 Fragaria vesca HOM05D005198 ORTHO05D006839 1.0e-11 74.7 130 41.5
Prupe.1G207000 Prunus persica HOM05D005198 ORTHO05D006839 1.0e-11 74.7 64 56.2
vmacro09048 Vaccinium macrocarpon HOM05D005198 ORTHO05D006839 1.0e-11 74.7 154 39.0
THA.LOC104813938 Tarenaya hassleriana HOM05D005198 ORTHO05D006839 1.3e-11 74.3 124 42.7
AUR62002390 Chenopodium quinoa HOM05D005198 ORTHO05D006839 1.7e-11 73.9 139 38.1
Gohir.A02G009975 Gossypium hirsutum HOM05D005198 ORTHO05D006839 1.7e-11 73.9 138 39.9
Ciclev10019752m.g Citrus clementina HOM05D005198 ORTHO05D006839 2.3e-11 73.6 125 44.8
FAN19G2119 Fragaria x ananassa HOM05D005198 ORTHO05D006839 2.3e-11 73.6 130 41.5
Manes.04G036150 Manihot esculenta HOM05D005198 ORTHO05D006839 2.3e-11 73.6 107 46.7
Gohir.D02G010200 Gossypium hirsutum HOM05D005198 ORTHO05D006839 3.0e-11 73.2 138 39.9
Nn1g09646 Nelumbo nucifera HOM05D005198 ORTHO05D006839 3.0e-11 73.2 71 47.9
Potri.013G126300 Populus trichocarpa HOM05D005198 ORTHO05D006839 3.0e-11 73.2 103 46.6
Duzib151G0783 Durio zibethinus HOM05D005198 ORTHO05D006839 3.9e-11 72.8 155 38.1
Eucgr.H00311 Eucalyptus grandis HOM05D005198 ORTHO05D006839 3.9e-11 72.8 100 42.0
Lj4A14T50 Lonicera japonica HOM05D005198 ORTHO05D006839 3.9e-11 72.8 53 62.3
Hma1.2p1_0554F.1_g177930 Hydrangea macrophylla HOM05D005198 ORTHO05D006839 5.0e-11 72.4 63 55.6
Zm00001eb246620 Zea mays HOM05D005198 ORTHO05D006839 8.6e-11 71.6 165 37.0
Actinidia28982 Actinidia chinensis HOM05D005198 ORTHO05D006839 1.1e-10 71.2 110 43.6
CANSAT11G2028 Cannabis sativa HOM05D005198 ORTHO05D006839 1.1e-10 71.2 160 34.4
Migut.G01222 Erythranthe guttata HOM05D005198 ORTHO05D006839 1.1e-10 71.2 53 58.5
Oeu020813.1 Olea europaea HOM05D005198 ORTHO05D006839 1.1e-10 71.2 63 50.8
Thecc.01G302200 Theobroma cacao HOM05D005198 ORTHO05D006839 1.1e-10 71.2 139 38.8
Dinv07059 Davidia involucrata HOM05D005198 ORTHO05D006839 1.5e-10 70.9 64 54.7
Gorai.005G012500 Gossypium raimondii HOM05D005198 ORTHO05D006839 1.9e-10 70.5 138 39.1
TWI63G1273 Tripterygium wilfordii HOM05D005198 ORTHO05D006839 1.9e-10 70.5 110 44.5
SGA_v2.0_scaffold12G06184 Striga asiatica HOM05D005198 ORTHO05D006839 3.3e-10 69.7 115 40.9
Glyma.07G208200 Glycine max HOM05D005198 ORTHO05D006839 9.5e-10 68.2 130 40.0
GSVIVG01038139001 Vitis vinifera HOM05D005198 ORTHO05D006839 9.5e-10 68.2 60 55.0
Aqoxy2G02750 Aquilegia oxysepala HOM05D005198 ORTHO05D006839 1.2e-09 67.8 109 38.5
Phvul.003G296400 Phaseolus vulgaris HOM05D005198 ORTHO05D006839 1.2e-09 67.8 51 56.9
Sed0009334 Sechium edule HOM05D005198 ORTHO05D006839 1.2e-09 67.8 114 39.5
Ah.13g073540 Amaranthus hybridus HOM05D005198 ORTHO05D006839 2.1e-09 67.0 115 37.4
PGR142G0872 Punica granatum HOM05D005198 ORTHO05D006839 2.1e-09 67.0 138 41.3
SHI30329 Sapria himalayana HOM05D005198 ORTHO05D000023 2.1e-09 67.0 109 42.2
ClCG07G015220 Citrullus lanatus HOM05D005198 ORTHO05D006839 2.8e-09 66.6 133 39.8
VMungo0251G3269 Vigna mungo HOM05D005198 ORTHO05D006839 3.6e-09 66.2 51 54.9
Glyma.02G137200 Glycine max HOM05D005198 ORTHO05D006839 4.7e-09 65.9 51 54.9
Hund03196 Selenicereus undatus HOM05D005198 ORTHO05D006839 6.2e-09 65.5 132 38.6
MELO3C017760.2 Cucumis melo HOM05D005198 ORTHO05D006839 8.0e-09 65.1 133 39.1
CsaV3_4G002810 Cucumis sativus L. HOM05D005198 ORTHO05D006839 8.0e-09 65.1 133 39.1
Lalb_Chr09g0328121 Lupinus albus HOM05D005198 ORTHO05D006839 8.0e-09 65.1 69 44.9
FAN26G1320 Fragaria x ananassa HOM05D005198 ORTHO05D006839 1.0e-08 64.7 145 36.6
Peaxi162Scf00075g01544 Petunia axillaris HOM05D005198 ORTHO05D006839 1.4e-08 64.3 52 51.9
SalBow3G0226 Salvia bowleyana HOM05D005198 ORTHO05D006839 1.8e-08 63.9 53 50.9
Sopen08g004940 Solanum pennellii HOM05D005198 ORTHO05D006839 2.3e-08 63.5 51 51.0
A02p18520 Brassica napus HOM05D005198 ORTHO05D040308 4.0e-08 62.8 88 52.3
BolC6t38540H Brassica oleracea HOM05D005198 ORTHO05D006839 4.0e-08 62.8 120 39.2
Lalb_Chr16g0384471 Lupinus albus HOM05D005198 ORTHO05D006839 4.0e-08 62.8 51 52.9
Nitab4.5_0011921g0010 Nicotiana tabacum HOM05D005198 ORTHO05D006839 4.0e-08 62.8 52 50.0
CAN.G1411.3 Capsicum annuum HOM05D005198 ORTHO05D006839 5.2e-08 62.4 49 53.1
MBI11_g23941_MAGBIO Magnolia biondii HOM05D005198 ORTHO05D006839 5.2e-08 62.4 73 47.9
PSO675G4502 Papaver somniferum HOM05D005198 ORTHO05D006839 6.8e-08 62.0 126 36.5
Solyc08g014060.4 Solanum lycopersicum HOM05D005198 ORTHO05D006839 6.8e-08 62.0 119 35.3
ATR0733G245 Amborella trichopoda HOM05D005198 ORTHO05D006839 8.9e-08 61.6 50 62.0
arahy.Tifrunner.gnm1.ann1.A4X0ZB Arachis hypogaea HOM05D005198 ORTHO05D006839 8.9e-08 61.6 129 35.7
PSO732G0749 Papaver somniferum HOM05D005198 ORTHO05D006839 1.5e-07 60.8 126 35.7
CDE04G2667 Ceratophyllum demersum HOM05D005198 ORTHO05D006839 2.0e-07 60.5 127 38.6
unitig_92.g28214 Utricularia gibba HOM05D005198 ORTHO05D006839 2.0e-07 60.5 113 35.4
HanXRQChr15g0483441 Helianthus annuus HOM05D005198 ORTHO05D006839 3.4e-07 59.7 129 37.2
arahy.Tifrunner.gnm1.ann1.Q28JUU Arachis hypogaea HOM05D005198 ORTHO05D006839 4.4e-07 59.3 129 34.1
BraA07t30630Z Brassica rapa HOM05D005198 ORTHO05D006839 5.8e-07 58.9 108 42.6
Nitab4.5_0000122g0140 Nicotiana tabacum HOM05D005198 ORTHO05D006839 7.5e-07 58.5 52 48.1
Medtr2g088350 Medicago truncatula HOM05D000088 ORTHO05D000830 2.2e-06 57.0 40 57.5
Lsat_1_v5_gn_9_61481 Lactuca sativa HOM05D005198 ORTHO05D006839 4.9e-06 55.8 110 40.9
ECA232G1195 Erigeron canadensis HOM05D005198 ORTHO05D006839 8.3e-06 55.1 109 40.4


User provided reference genes

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