Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C02p30110 Brassica napus HOM05D005576 ORTHO05D007010 2.0e-83 312.4 154 100.0
BolC2t09060H Brassica oleracea HOM05D005576 ORTHO05D007010 5.5e-78 294.3 154 96.1
Thhalv10018070m.g Eutrema salsugineum HOM05D005576 ORTHO05D007010 7.5e-43 177.6 145 64.1
Sp5g27640 Schrenkiella parvula HOM05D005576 ORTHO05D007010 7.5e-43 177.6 145 63.4
CARHR065500 Cardamine hirsuta HOM05D005576 ORTHO05D007010 2.2e-42 176.0 145 64.8
Carub.0002s1942 Capsella rubella HOM05D005576 ORTHO05D007010 6.0e-40 167.9 145 62.8
AL2G32250 Arabidopsis lyrata HOM05D005576 ORTHO05D007010 7.8e-40 167.5 145 61.4
Aa31LG4G2910 Aethionema arabicum HOM05D005576 ORTHO05D007010 1.1e-38 163.7 145 59.3
Aa31LG4G2950 Aethionema arabicum HOM05D005576 ORTHO05D007010 1.1e-38 163.7 145 59.3
AT1G72560 Arabidopsis thaliana HOM05D005576 ORTHO05D007010 3.3e-38 162.2 145 59.3
THA.LOC104808055 Tarenaya hassleriana HOM05D005576 ORTHO05D007010 9.5e-38 160.6 145 58.6
Lalb_Chr04g0261101 Lupinus albus HOM05D005576 ORTHO05D007010 3.4e-35 152.1 143 57.3
C06p46920 Brassica napus HOM05D005576 ORTHO05D007010 4.4e-35 151.8 146 59.6
BolC6t39733H Brassica oleracea HOM05D005576 ORTHO05D007010 4.4e-35 151.8 146 59.6
HanXRQChr09g0276901 Helianthus annuus HOM05D005576 ORTHO05D007010 1.7e-34 149.8 142 55.6
THA.LOC104812251 Tarenaya hassleriana HOM05D005576 ORTHO05D007010 2.9e-34 149.1 142 56.3
Cpa.g.sc1732.1 Carica papaya HOM05D005576 ORTHO05D007010 3.7e-34 148.7 145 54.5
vmacro22036 Vaccinium macrocarpon HOM05D005576 ORTHO05D007010 6.4e-34 147.9 141 55.3
DCAR_026415 Daucus carota HOM05D005576 ORTHO05D007010 8.4e-34 147.5 142 54.2
Lalb_Chr15g0076791 Lupinus albus HOM05D005576 ORTHO05D007010 8.4e-34 147.5 143 55.2
GSVIVG01016742001 Vitis vinifera HOM05D005576 ORTHO05D007010 8.4e-34 147.5 145 53.8
Atru.chr1.3999 Acer truncatum HOM05D005576 ORTHO05D007010 1.1e-33 147.1 143 54.5
Dinv20428 Davidia involucrata HOM05D005576 ORTHO05D007010 5.4e-33 144.8 145 52.4
Ciclev10024809m.g Citrus clementina HOM05D005576 ORTHO05D007010 7.1e-33 144.4 147 53.1
Nn8g38631 Nelumbo nucifera HOM05D005576 ORTHO05D007010 7.1e-33 144.4 145 51.0
Actinidia25327 Actinidia chinensis HOM05D005576 ORTHO05D007010 9.2e-33 144.1 145 52.4
Actinidia26822 Actinidia chinensis HOM05D005576 ORTHO05D007010 9.2e-33 144.1 145 52.4
Actinidia27733 Actinidia chinensis HOM05D005576 ORTHO05D007010 9.2e-33 144.1 145 52.4
Dinv20426 Davidia involucrata HOM05D005576 ORTHO05D007010 9.2e-33 144.1 145 52.4
Sed0003060 Sechium edule HOM05D005576 ORTHO05D007010 9.2e-33 144.1 145 53.8
MELO3C024350.2 Cucumis melo HOM05D005576 ORTHO05D007010 1.2e-32 143.7 146 54.8
ECA232G2029 Erigeron canadensis HOM05D005576 ORTHO05D007010 1.2e-32 143.7 145 51.7
Lj5C36G17 Lonicera japonica HOM05D005576 ORTHO05D007010 1.2e-32 143.7 145 51.7
TAR626G1694 Trochodendron aralioides HOM05D005576 ORTHO05D007010 1.2e-32 143.7 145 51.7
Lj9A532T67 Lonicera japonica HOM05D005576 ORTHO05D007010 2.7e-32 142.5 145 52.4
Nitab4.5_0002898g0010 Nicotiana tabacum HOM05D005576 ORTHO05D007010 3.5e-32 142.1 141 53.2
TWI31G0259 Tripterygium wilfordii HOM05D005576 ORTHO05D007010 4.6e-32 141.7 145 52.4
CiPaw.02G135100 Carya illinoinensis HOM05D005576 ORTHO05D007010 6.0e-32 141.4 145 51.7
Lsat_1_v5_gn_4_93500 Lactuca sativa HOM05D005576 ORTHO05D007010 6.0e-32 141.4 145 52.4
Potri.003G066200 Populus trichocarpa HOM05D005576 ORTHO05D007010 6.0e-32 141.4 150 51.3
Hund18687 Selenicereus undatus HOM05D005576 ORTHO05D007010 1.0e-31 140.6 145 50.3
Haze_16039 Corylus avellana HOM05D005576 ORTHO05D007010 1.3e-31 140.2 145 52.4
Nitab4.5_0004422g0040 Nicotiana tabacum HOM05D005576 ORTHO05D007010 1.3e-31 140.2 141 52.5
Actinidia26024 Actinidia chinensis HOM05D005576 ORTHO05D007010 1.7e-31 139.8 145 50.3
Aqoxy7G04073 Aquilegia oxysepala HOM05D005576 ORTHO05D007010 1.7e-31 139.8 145 49.7
Peaxi162Scf00038g02138 Petunia axillaris HOM05D005576 ORTHO05D007010 1.7e-31 139.8 141 53.2
Thecc.06G121300 Theobroma cacao HOM05D005576 ORTHO05D007010 1.7e-31 139.8 145 52.4
CsaV3_7G034420 Cucumis sativus L. HOM05D005576 ORTHO05D007010 2.3e-31 139.4 145 52.4
TPR.G28874 Trifolium pratense HOM05D005576 ORTHO05D007010 2.3e-31 139.4 141 52.5
A07p38760 Brassica napus HOM05D005576 ORTHO05D007010 3.0e-31 139.0 146 56.2
BraA07t31429Z Brassica rapa HOM05D005576 ORTHO05D007010 3.0e-31 139.0 146 56.2
CANSAT56G3183 Cannabis sativa HOM05D005576 ORTHO05D007010 3.0e-31 139.0 145 53.1
Glyma.19G263400 Glycine max HOM05D005576 ORTHO05D007010 3.0e-31 139.0 144 51.4
MBI13_g12059_MAGBIO Magnolia biondii HOM05D005576 ORTHO05D007010 3.0e-31 139.0 142 50.7
Sc15g0000400 Simmondsia chinensis HOM05D005576 ORTHO05D007010 3.0e-31 139.0 145 49.7
CiPaw.01G218000 Carya illinoinensis HOM05D005576 ORTHO05D007010 3.9e-31 138.7 143 53.8
Rhsim12G0210100 Rhododendron simsii HOM05D005576 ORTHO05D007010 3.9e-31 138.7 141 51.8
Solyc03g122370.4 Solanum lycopersicum HOM05D005576 ORTHO05D007010 3.9e-31 138.7 142 50.0
Nn6g35707 Nelumbo nucifera HOM05D005576 ORTHO05D007010 5.1e-31 138.3 145 50.3
CAN.G668.41 Capsicum annuum HOM05D005576 ORTHO05D007010 6.6e-31 137.9 142 50.0
Manes.11G019400 Manihot esculenta HOM05D005576 ORTHO05D007010 6.6e-31 137.9 145 49.7
Cc04_g01260 Coffea canephora HOM05D005576 ORTHO05D007010 8.6e-31 137.5 145 49.7
Medtr7g117565 Medicago truncatula HOM05D005576 ORTHO05D007010 8.6e-31 137.5 141 51.1
Psat3g000040 Pisum sativum HOM05D005576 ORTHO05D007010 8.6e-31 137.5 141 51.1
Sabra03G0038700 Salix brachista HOM05D005576 ORTHO05D007010 8.6e-31 137.5 150 50.0
Sopen03g041140 Solanum pennellii HOM05D005576 ORTHO05D007010 8.6e-31 137.5 142 49.3
PGSC0003DMG400022883 Solanum tuberosum HOM05D005576 ORTHO05D007010 8.6e-31 137.5 142 49.3
FvH4_6g34890 Fragaria vesca HOM05D005576 ORTHO05D007010 1.1e-30 137.1 145 51.7
FAN14G0396 Fragaria x ananassa HOM05D005576 ORTHO05D007010 1.1e-30 137.1 145 51.7
MD17G1167700 Malus domestica HOM05D005576 ORTHO05D007010 1.1e-30 137.1 145 51.7
Phvul.009G263000 Phaseolus vulgaris HOM05D005576 ORTHO05D007010 1.1e-30 137.1 150 50.0
Prupe.3G039600 Prunus persica HOM05D005576 ORTHO05D007010 1.5e-30 136.7 145 51.7
Glyma.03G264400 Glycine max HOM05D005576 ORTHO05D007010 1.9e-30 136.3 145 51.0
Oeu000412.2 Olea europaea HOM05D005576 ORTHO05D007010 2.5e-30 136.0 138 52.9
CSS0000574 Camellia sinensis var. sinensis HOM05D005576 ORTHO05D007010 4.3e-30 135.2 142 52.1
VMungo1309G3067 Vigna mungo HOM05D005576 ORTHO05D007010 5.6e-30 134.8 145 51.0
RcHm_v2.0_Chr2g0145781 Rosa chinensis HOM05D005576 ORTHO05D007010 7.3e-30 134.4 145 51.0
ClCG09G001010 Citrullus lanatus HOM05D005576 ORTHO05D007010 1.2e-29 133.7 158 50.0
FAN09G4405 Fragaria x ananassa HOM05D005576 ORTHO05D007010 1.2e-29 133.7 145 51.7
SalBow6G0288 Salvia bowleyana HOM05D005576 ORTHO05D007010 1.2e-29 133.7 145 48.3
SalBow6G5091 Salvia bowleyana HOM05D005576 ORTHO05D007010 1.2e-29 133.7 145 48.3
ATR0598G079 Amborella trichopoda HOM05D005576 ORTHO05D007010 1.6e-29 133.3 145 49.0
CDE05G1788 Ceratophyllum demersum HOM05D005576 ORTHO05D007010 1.6e-29 133.3 142 50.0
PSO063G0826 Papaver somniferum HOM05D005576 ORTHO05D007010 1.6e-29 133.3 123 52.8
Ah.08g216850 Amaranthus hybridus HOM05D005576 ORTHO05D007010 2.1e-29 132.9 141 48.9
Gohir.A10G053800 Gossypium hirsutum HOM05D005576 ORTHO05D007010 2.1e-29 132.9 145 50.3
Gohir.D10G055800 Gossypium hirsutum HOM05D005576 ORTHO05D007010 2.1e-29 132.9 145 50.3
Gorai.011G059500 Gossypium raimondii HOM05D005576 ORTHO05D007010 2.1e-29 132.9 145 50.3
QL05p004145 Quercus lobata HOM05D005576 ORTHO05D007010 2.1e-29 132.9 145 50.3
COL.COLO4_30746 Corchorus olitorius HOM05D005576 ORTHO05D007010 2.8e-29 132.5 142 52.8
MD09G1181500 Malus domestica HOM05D005576 ORTHO05D007010 2.8e-29 132.5 145 49.7
Ca_09568_v3 Cicer arietinum L. HOM05D005576 ORTHO05D007010 4.7e-29 131.7 141 49.6
Duzib235G0347 Durio zibethinus HOM05D005576 ORTHO05D007010 6.2e-29 131.3 145 50.3
Oeu015487.1 Olea europaea HOM05D005576 ORTHO05D007010 6.2e-29 131.3 145 47.6
Potri.001G168100 Populus trichocarpa HOM05D005576 ORTHO05D007010 6.2e-29 131.3 150 47.3
Lj1g0011724 Lotus japonicus HOM05D005576 ORTHO05D007010 1.8e-28 129.8 142 47.9
EL10Ac7g16417 Beta vulgaris HOM05D005576 ORTHO05D007010 4.0e-28 128.6 146 50.0
Oeu015486.1 Olea europaea HOM05D005576 ORTHO05D007010 5.2e-28 128.3 110 57.3
Migut.I01082 Erythranthe guttata HOM05D005576 ORTHO05D007010 6.8e-28 127.9 145 47.6
HPP92_026306 Vanilla planifolia HOM05D005576 ORTHO05D007010 6.8e-28 127.9 147 44.2
PGR102G0536 Punica granatum HOM05D005576 ORTHO05D007010 8.9e-28 127.5 144 47.9
Duzib160G0875 Durio zibethinus HOM05D005576 ORTHO05D007010 4.4e-27 125.2 145 49.0
SGA_v2.0_scaffold71G23839 Striga asiatica HOM05D005576 ORTHO05D007010 4.4e-27 125.2 146 46.6
MSTRG.4792 Avicennia marina HOM05D005576 ORTHO05D007010 1.3e-26 123.6 146 45.9
BcaB05g24763 Brassica carinata HOM05D000046 ORTHO05D000457 1.7e-26 123.2 92 71.7
Zm00001eb109040 Zea mays HOM05D005576 ORTHO05D007010 1.4e-25 120.2 143 45.5
Zm00001eb327340 Zea mays HOM05D005576 ORTHO05D007010 1.9e-25 119.8 143 45.5
PSO421G0066 Papaver somniferum HOM05D005576 ORTHO05D007010 2.4e-25 119.4 145 44.1
arahy.Tifrunner.gnm1.ann1.W8MD5J Arachis hypogaea HOM05D005576 ORTHO05D007010 5.4e-25 118.2 147 46.3
AUR62009889 Chenopodium quinoa HOM05D005576 ORTHO05D007010 7.1e-25 117.9 141 43.3
arahy.Tifrunner.gnm1.ann1.E27NE4 Arachis hypogaea HOM05D005576 ORTHO05D007010 1.2e-24 117.1 147 45.6
AUR62001476 Chenopodium quinoa HOM05D005576 ORTHO05D007010 1.2e-24 117.1 145 41.4
CDE11G0151 Ceratophyllum demersum HOM05D005576 ORTHO05D007010 1.3e-21 107.1 142 43.7
Dinv37863 Davidia involucrata HOM05D005576 ORTHO05D007010 8.1e-21 104.4 145 42.1
Mapoly0019s0146 Marchantia polymorpha HOM05D005576 ORTHO05D007010 1.1e-20 104.0 144 37.5
Pp3c12_21910 Physcomitrium patens HOM05D005576 ORTHO05D007010 1.1e-20 104.0 145 35.2
MSTRG.10949 Avicennia marina HOM05D005576 ORTHO05D007010 1.4e-20 103.6 107 50.5
Os07g0613300 Oryza sativa ssp. japonica HOM05D005576 ORTHO05D007010 4.4e-19 98.6 142 37.3
AagrBONN_evm.TU.Sc2ySwM_344.1866 Anthoceros agrestis HOM05D005576 ORTHO05D007010 6.0e-16 88.2 145 33.8
SMO141G0108 Selaginella moellendorffii HOM05D005576 ORTHO05D007010 5.1e-15 85.1 145 33.8
Eucgr.F04406 Eucalyptus grandis HOM05D005576 ORTHO05D007010 6.2e-13 78.2 120 35.0
CBR_g44922 Chara braunii HOM05D005576 ORTHO05D007010 1.2e-11 73.9 138 32.6
FAN02G3375 Fragaria x ananassa HOM05D005576 ORTHO05D007010 1.5e-06 57.0 45 57.8


User provided reference genes

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