Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C02p29830 Brassica napus HOM05D008786 ORTHO05D011065 9.3e-37 156.4 80 100.0
BcaC03g15370 Brassica carinata HOM05D008786 ORTHO05D011065 5.7e-34 147.1 75 100.0
BcaB05g24747 Brassica carinata HOM05D008786 ORTHO05D011065 6.5e-30 133.7 79 88.6
BolC2t09030H Brassica oleracea HOM05D008786 ORTHO05D011065 1.1e-29 132.9 75 93.3
BraA02t06842Z Brassica rapa HOM05D008786 ORTHO05D011065 3.2e-29 131.3 75 90.7
BcaB03g14979 Brassica carinata HOM05D008786 ORTHO05D011065 1.2e-20 102.8 84 70.2
CARHR065230 Cardamine hirsuta HOM05D008786 ORTHO05D011065 7.9e-20 100.1 79 69.6
Thhalv10019794m.g Eutrema salsugineum HOM05D008786 ORTHO05D011065 7.9e-20 100.1 80 72.5
Sp5g27390 Schrenkiella parvula HOM05D008786 ORTHO05D011065 3.0e-19 98.2 84 69.0
BcaB03g15660 Brassica carinata HOM05D008786 ORTHO05D011065 1.3e-17 92.8 84 65.5
A02p17950 Brassica napus HOM05D008786 ORTHO05D011065 2.2e-17 92.0 48 97.9
A07p30280 Brassica napus HOM05D008786 ORTHO05D042067 4.8e-17 90.9 84 61.9
C06p35030 Brassica napus HOM05D008786 ORTHO05D011065 1.8e-16 89.0 84 63.1
BolC6t38602H Brassica oleracea HOM05D008786 ORTHO05D011065 1.8e-16 89.0 84 63.1
BcaC08g45715 Brassica carinata HOM05D008786 ORTHO05D011065 3.1e-16 88.2 80 65.0
BraA07t31409Z Brassica rapa HOM05D008786 ORTHO05D011065 1.2e-15 86.3 84 64.3
A07p38490 Brassica napus HOM05D008786 ORTHO05D011065 2.6e-15 85.1 84 63.1
BcaC08g46687 Brassica carinata HOM05D008786 ORTHO05D011065 2.2e-14 82.0 79 65.8
C06p46670 Brassica napus HOM05D008786 ORTHO05D011065 2.2e-14 82.0 79 65.8
BolC6t39712H Brassica oleracea HOM05D008786 ORTHO05D011065 2.2e-14 82.0 79 65.8
Carub.0002s1917 Capsella rubella HOM05D008786 ORTHO05D011065 2.2e-14 82.0 73 64.4
AL1G29560 Arabidopsis lyrata HOM05D008786 ORTHO05D011065 4.2e-13 77.8 65 61.5
Carub.0001s1705 Capsella rubella HOM05D008786 ORTHO05D011065 6.1e-12 73.9 77 57.1
AL1G29540 Arabidopsis lyrata HOM05D008786 ORTHO05D011065 1.0e-11 73.2 69 59.4
AT1G17285 Arabidopsis thaliana HOM05D008786 ORTHO05D011065 1.0e-11 73.2 69 59.4
BcaC07g41429 Brassica carinata HOM05D008786 ORTHO05D011065 1.0e-11 73.2 81 56.8
C08p43960 Brassica napus HOM05D008786 ORTHO05D011065 1.0e-11 73.2 81 56.8
AL8G24690 Arabidopsis lyrata HOM05D011936 ORTHO05D014852 6.7e-11 70.5 79 54.4
BolC8t51945H Brassica oleracea HOM05D001342 ORTHO05D001286 6.7e-11 70.5 79 57.0
Thhalv10009909m.g Eutrema salsugineum HOM05D008786 ORTHO05D011065 8.8e-11 70.1 70 61.4
AT5G50443 Arabidopsis thaliana HOM05D011936 ORTHO05D014852 2.6e-10 68.6 79 51.9
Aa31LG4G2690 Aethionema arabicum HOM05D008786 ORTHO05D011065 3.3e-10 68.2 88 54.5
AT1G17300 Arabidopsis thaliana HOM05D008786 ORTHO05D011065 9.7e-10 66.6 63 58.7
CARHR017880 Cardamine hirsuta HOM05D008786 ORTHO05D011065 2.2e-09 65.5 68 54.4
THA.LOC104812274 Tarenaya hassleriana HOM05D008786 ORTHO05D011065 3.7e-09 64.7 87 47.1
A09p60480 Brassica napus HOM05D008786 ORTHO05D011065 6.3e-09 63.9 80 51.2
BcaC07g41411 Brassica carinata HOM05D008786 ORTHO05D011065 8.2e-09 63.5 81 51.9
BraA09t41419Z Brassica rapa HOM05D001342 ORTHO05D001286 1.1e-08 63.2 78 52.6
Sp1g15420 Schrenkiella parvula HOM05D008786 ORTHO05D011065 1.4e-08 62.8 82 50.0
BraA07t30665Z Brassica rapa HOM05D008786 ORTHO05D042067 4.1e-08 61.2 64 60.9
BolC5t30275H Brassica oleracea HOM05D001342 ORTHO05D001286 1.2e-07 59.7 82 47.6
CARHR257850 Cardamine hirsuta HOM05D011936 ORTHO05D014852 1.2e-07 59.7 79 46.8
Carub.0008s1056 Capsella rubella HOM05D011936 ORTHO05D014852 1.6e-07 59.3 79 50.6
Aa31LG7G2110 Aethionema arabicum HOM05D008786 ORTHO05D011065 2.7e-07 58.5 78 46.2
C05p15680 Brassica napus HOM05D008786 ORTHO05D011065 5.9e-07 57.4 82 46.3
BcaC05g25651 Brassica carinata HOM05D008786 ORTHO05D011065 1.3e-06 56.2 79 48.1
A06p13240 Brassica napus HOM05D008786 ORTHO05D011065 1.3e-06 56.2 79 48.1
BraA06t24477Z Brassica rapa HOM05D008786 ORTHO05D011065 3.8e-06 54.7 79 46.8


User provided reference genes

Program Settings