Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C02p29790 Brassica napus HOM05D007344 ORTHO05D009010 4.1e-63 244.6 125 100.0
BolC2t09025H Brassica oleracea HOM05D007344 ORTHO05D009010 9.1e-63 243.4 125 99.2
BcaC03g15367 Brassica carinata HOM05D007344 ORTHO05D009010 5.9e-62 240.7 125 98.4
C02p29770 Brassica napus HOM05D007344 ORTHO05D009010 5.9e-62 240.7 125 98.4
A02p17920 Brassica napus HOM05D007344 ORTHO05D009010 8.0e-59 230.3 124 94.4
BraA02t06839Z Brassica rapa HOM05D007344 ORTHO05D009010 8.0e-59 230.3 124 94.4
BcaB05g24743 Brassica carinata HOM05D007344 ORTHO05D009010 1.5e-52 209.5 125 88.8
BcaB05g24740 Brassica carinata HOM05D007344 ORTHO05D009010 1.2e-51 206.5 125 86.4
Sp5g27360 Schrenkiella parvula HOM05D007344 ORTHO05D009010 1.4e-34 149.8 129 66.7
Carub.0002s1910 Capsella rubella HOM05D007344 ORTHO05D009010 7.3e-28 127.5 128 58.6
BcaB03g14972 Brassica carinata HOM05D007344 ORTHO05D009010 1.8e-26 122.9 129 55.8
BcaB03g14974 Brassica carinata HOM05D007344 ORTHO05D009010 1.8e-26 122.9 129 55.8
Thhalv10019095m.g Eutrema salsugineum HOM05D007344 ORTHO05D009010 4.4e-25 118.2 128 57.0
CARHR065170 Cardamine hirsuta HOM05D007344 ORTHO05D009010 7.5e-25 117.5 125 53.6
BolC6t39693H Brassica oleracea HOM05D007344 ORTHO05D009010 1.3e-24 116.7 129 55.8
AT1G72290 Arabidopsis thaliana HOM05D007344 ORTHO05D009010 1.7e-24 116.3 116 56.0
BcaC08g46676 Brassica carinata HOM05D007344 ORTHO05D009010 1.7e-24 116.3 129 55.0
C06p46520 Brassica napus HOM05D007344 ORTHO05D009010 1.7e-24 116.3 129 55.0
BcaB02g07012 Brassica carinata HOM05D007344 ORTHO05D009010 2.2e-24 115.9 128 55.5
AL2G31960 Arabidopsis lyrata HOM05D007344 ORTHO05D009010 3.7e-24 115.2 129 55.8
BcaB03g14973 Brassica carinata HOM05D007344 ORTHO05D009010 3.7e-24 115.2 129 53.5
A07p38410 Brassica napus HOM05D007344 ORTHO05D009010 3.7e-24 115.2 131 53.4
BolC6t39697H Brassica oleracea HOM05D007344 ORTHO05D009010 3.7e-24 115.2 129 55.0
BraA07t31402Z Brassica rapa HOM05D007344 ORTHO05D009010 3.7e-24 115.2 131 53.4
C06p46460 Brassica napus HOM05D007344 ORTHO05D009010 4.9e-24 114.8 129 55.0
BolC6t39698H Brassica oleracea HOM05D007344 ORTHO05D009010 1.1e-23 113.6 129 53.5
CARHR065180 Cardamine hirsuta HOM05D007344 ORTHO05D009010 1.1e-23 113.6 128 53.1
Carub.0002s1914 Capsella rubella HOM05D007344 ORTHO05D009010 2.0e-22 109.4 129 52.7
BcaC08g46681 Brassica carinata HOM05D007344 ORTHO05D032082 2.7e-22 109.0 121 52.1
C06p46580 Brassica napus HOM05D007344 ORTHO05D032082 2.7e-22 109.0 121 52.1
BolC6t39703H Brassica oleracea HOM05D007344 ORTHO05D032082 2.7e-22 109.0 121 52.1
BcaC08g46679 Brassica carinata HOM05D007344 ORTHO05D009010 4.6e-22 108.2 124 53.2
C06p46550 Brassica napus HOM05D007344 ORTHO05D009010 4.6e-22 108.2 124 53.2
BolC6t39700H Brassica oleracea HOM05D007344 ORTHO05D009010 4.6e-22 108.2 124 53.2
BcaC03g15365 Brassica carinata HOM05D007344 ORTHO05D009010 6.0e-22 107.8 121 54.5
BcaC03g15366 Brassica carinata HOM05D007344 ORTHO05D009010 6.0e-22 107.8 121 54.5
C02p29730 Brassica napus HOM05D007344 ORTHO05D009010 6.0e-22 107.8 121 54.5
C02p29750 Brassica napus HOM05D007344 ORTHO05D009010 6.0e-22 107.8 121 54.5
BolC2t09020H Brassica oleracea HOM05D007344 ORTHO05D009010 6.0e-22 107.8 121 54.5
BolC2t09022H Brassica oleracea HOM05D007344 ORTHO05D009010 6.0e-22 107.8 121 54.5
BraA07t31405Z Brassica rapa HOM05D007344 ORTHO05D009010 7.8e-22 107.5 124 53.2
A02p17860 Brassica napus HOM05D007344 ORTHO05D009010 2.3e-21 105.9 124 54.0
BraA02t06836Z Brassica rapa HOM05D007344 ORTHO05D009010 2.3e-21 105.9 124 54.0
Carub.0002s1909 Capsella rubella HOM05D007344 ORTHO05D009010 2.3e-21 105.9 131 55.7
BcaC03g15361 Brassica carinata HOM05D007344 ORTHO05D009010 5.0e-21 104.8 125 55.2
A07p38440 Brassica napus HOM05D007344 ORTHO05D009010 5.0e-21 104.8 124 52.4
BcaB05g24739 Brassica carinata HOM05D007344 ORTHO05D009010 6.6e-21 104.4 124 52.4
C06p46590 Brassica napus HOM05D007344 ORTHO05D009010 1.9e-20 102.8 125 51.2
BolC6t39705H Brassica oleracea HOM05D007344 ORTHO05D009010 1.9e-20 102.8 125 51.2
A02p17890 Brassica napus HOM05D007344 ORTHO05D009010 4.3e-20 101.7 122 52.5
BraA02t06838Z Brassica rapa HOM05D007344 ORTHO05D009010 4.3e-20 101.7 122 52.5
BcaB03g14975 Brassica carinata HOM05D007344 ORTHO05D009010 9.5e-20 100.5 124 50.8
BcaB05g24736 Brassica carinata HOM05D007344 ORTHO05D009010 4.7e-19 98.2 121 50.4
BcaB05g24737 Brassica carinata HOM05D007344 ORTHO05D009010 4.7e-19 98.2 121 50.4
BcaC08g46678 Brassica carinata HOM05D007344 ORTHO05D009010 1.4e-18 96.7 117 49.6
C06p46540 Brassica napus HOM05D007344 ORTHO05D009010 1.4e-18 96.7 117 49.6
BolC6t39696H Brassica oleracea HOM05D007344 ORTHO05D009010 1.4e-18 96.7 120 51.7
BolC6t39699H Brassica oleracea HOM05D007344 ORTHO05D009010 1.4e-18 96.7 117 49.6
CARHR065160 Cardamine hirsuta HOM05D007344 ORTHO05D009010 1.4e-18 96.7 124 47.6
BcaC08g46677 Brassica carinata HOM05D007344 ORTHO05D009010 1.8e-18 96.3 106 53.8
Carub.0002s1912 Capsella rubella HOM05D007344 ORTHO05D009010 2.3e-18 95.9 111 58.6
A07p38420 Brassica napus HOM05D007344 ORTHO05D009010 1.5e-17 93.2 117 47.9
BraA07t31403Z Brassica rapa HOM05D007344 ORTHO05D009010 1.5e-17 93.2 117 47.9
BraA07t31400Z Brassica rapa HOM05D007344 ORTHO05D009010 2.6e-17 92.4 128 47.7
BcaC08g46673 Brassica carinata HOM05D007344 ORTHO05D009010 3.4e-17 92.0 124 49.2
C06p46430 Brassica napus HOM05D007344 ORTHO05D009010 3.4e-17 92.0 124 49.2
BcaB03g14976 Brassica carinata HOM05D007344 ORTHO05D009010 9.8e-17 90.5 113 48.7
BcaB03g14970 Brassica carinata HOM05D007344 ORTHO05D009010 4.9e-16 88.2 121 45.5
BcaC08g46675 Brassica carinata HOM05D007344 ORTHO05D009010 1.1e-12 77.0 90 52.2
C06p46510 Brassica napus HOM05D007344 ORTHO05D009010 1.1e-12 77.0 90 52.2
BcaC08g46680 Brassica carinata HOM05D007344 ORTHO05D009010 1.8e-10 69.7 71 57.7
C06p46560 Brassica napus HOM05D007344 ORTHO05D041415 3.1e-10 68.9 75 54.7
BolC6t39701H Brassica oleracea HOM05D007344 ORTHO05D041415 3.1e-10 68.9 75 54.7
AL2G31970 Arabidopsis lyrata HOM05D007344 ORTHO05D009010 8.9e-10 67.4 70 58.6
A09p37590 Brassica napus HOM05D007344 ORTHO05D009010 5.8e-09 64.7 127 37.8
BcaC08g46684 Brassica carinata HOM05D007344 ORTHO05D032659 7.5e-09 64.3 88 50.0
C06p46640 Brassica napus HOM05D007344 ORTHO05D032659 7.5e-09 64.3 88 50.0
BolC5t31464H Brassica oleracea HOM05D007344 ORTHO05D009010 7.5e-09 64.3 127 37.8
BolC6t39709H Brassica oleracea HOM05D007344 ORTHO05D032659 7.5e-09 64.3 88 50.0
BcaC05g26866 Brassica carinata HOM05D007344 ORTHO05D009010 9.9e-09 63.9 127 37.8
BraA09t39269Z Brassica rapa HOM05D007344 ORTHO05D009010 1.7e-08 63.2 126 37.3
BolC6t39707H Brassica oleracea HOM05D007344 ORTHO05D009010 2.9e-08 62.4 91 44.0
BcaB07g32467 Brassica carinata HOM05D007344 ORTHO05D009010 6.4e-08 61.2 127 35.4
C05p27460 Brassica napus HOM05D007344 ORTHO05D009010 1.4e-07 60.1 137 35.8
THA.LOC104813298 Tarenaya hassleriana HOM05D007344 ORTHO05D009010 2.4e-07 59.3 127 38.6
BcaC08g46682 Brassica carinata HOM05D007344 ORTHO05D009010 3.5e-06 55.5 65 52.3


User provided reference genes

Program Settings