Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC03g15366 Brassica carinata HOM05D007344 ORTHO05D009010 4.2e-127 458.0 224 100.0
C02p29750 Brassica napus HOM05D007344 ORTHO05D009010 4.2e-127 458.0 224 100.0
BolC2t09022H Brassica oleracea HOM05D007344 ORTHO05D009010 3.8e-120 434.9 210 100.0
A02p17860 Brassica napus HOM05D007344 ORTHO05D009010 7.2e-119 430.6 227 93.8
BraA02t06836Z Brassica rapa HOM05D007344 ORTHO05D009010 7.2e-119 430.6 227 93.8
BcaC03g15365 Brassica carinata HOM05D007344 ORTHO05D009010 2.7e-118 428.7 210 99.0
C02p29730 Brassica napus HOM05D007344 ORTHO05D009010 2.7e-118 428.7 210 99.0
BcaB05g24739 Brassica carinata HOM05D007344 ORTHO05D009010 6.1e-110 401.0 228 87.7
BcaC03g15361 Brassica carinata HOM05D007344 ORTHO05D009010 1.2e-105 386.7 225 85.3
BcaB05g24737 Brassica carinata HOM05D007344 ORTHO05D009010 7.5e-100 367.5 223 83.0
BcaB05g24736 Brassica carinata HOM05D007344 ORTHO05D009010 4.8e-99 364.8 223 83.4
BolC2t09020H Brassica oleracea HOM05D007344 ORTHO05D009010 1.6e-97 359.8 187 93.6
A02p17890 Brassica napus HOM05D007344 ORTHO05D009010 1.5e-95 353.2 211 82.5
BraA02t06838Z Brassica rapa HOM05D007344 ORTHO05D009010 1.5e-95 353.2 211 82.5
Carub.0002s1910 Capsella rubella HOM05D007344 ORTHO05D009010 1.2e-68 263.8 224 61.6
Sp5g27360 Schrenkiella parvula HOM05D007344 ORTHO05D009010 1.5e-63 246.9 223 56.5
Thhalv10019095m.g Eutrema salsugineum HOM05D007344 ORTHO05D009010 1.6e-62 243.4 223 57.8
BolC6t39693H Brassica oleracea HOM05D007344 ORTHO05D009010 2.3e-61 239.6 220 56.8
BcaC08g46676 Brassica carinata HOM05D007344 ORTHO05D009010 2.0e-60 236.5 220 56.4
C06p46520 Brassica napus HOM05D007344 ORTHO05D009010 2.0e-60 236.5 220 56.4
BolC6t39697H Brassica oleracea HOM05D007344 ORTHO05D009010 2.0e-60 236.5 220 56.4
A07p38410 Brassica napus HOM05D007344 ORTHO05D009010 1.3e-59 233.8 221 55.2
BraA07t31402Z Brassica rapa HOM05D007344 ORTHO05D009010 1.3e-59 233.8 221 55.2
BcaB02g07012 Brassica carinata HOM05D007344 ORTHO05D009010 7.1e-58 228.0 221 55.7
C06p46460 Brassica napus HOM05D007344 ORTHO05D009010 7.1e-58 228.0 220 54.5
BcaB03g14972 Brassica carinata HOM05D007344 ORTHO05D009010 4.6e-57 225.3 223 54.3
BcaB03g14974 Brassica carinata HOM05D007344 ORTHO05D009010 4.6e-57 225.3 223 54.3
BcaB03g14973 Brassica carinata HOM05D007344 ORTHO05D009010 1.3e-56 223.8 221 53.4
Carub.0002s1914 Capsella rubella HOM05D007344 ORTHO05D009010 1.7e-56 223.4 222 55.0
AT1G72290 Arabidopsis thaliana HOM05D007344 ORTHO05D009010 1.1e-55 220.7 212 53.8
AL2G31960 Arabidopsis lyrata HOM05D007344 ORTHO05D009010 4.3e-55 218.8 221 53.8
BolC6t39698H Brassica oleracea HOM05D007344 ORTHO05D009010 2.4e-53 213.0 224 54.5
CARHR065170 Cardamine hirsuta HOM05D007344 ORTHO05D009010 5.2e-53 211.8 218 51.8
A02p17920 Brassica napus HOM05D007344 ORTHO05D009010 5.4e-50 201.8 217 52.5
BraA02t06839Z Brassica rapa HOM05D007344 ORTHO05D009010 5.4e-50 201.8 217 52.5
BcaB05g24743 Brassica carinata HOM05D007344 ORTHO05D009010 9.3e-50 201.1 218 52.8
BcaB05g24740 Brassica carinata HOM05D007344 ORTHO05D009010 1.3e-48 197.2 218 51.8
BolC2t09025H Brassica oleracea HOM05D007344 ORTHO05D009010 1.7e-48 196.8 217 52.1
BolC6t39696H Brassica oleracea HOM05D007344 ORTHO05D009010 3.9e-48 195.7 200 51.5
A07p38440 Brassica napus HOM05D007344 ORTHO05D009010 1.1e-47 194.1 225 52.0
C02p29770 Brassica napus HOM05D007344 ORTHO05D009010 1.1e-47 194.1 217 51.6
BcaC08g46679 Brassica carinata HOM05D007344 ORTHO05D009010 1.3e-46 190.7 226 52.2
C06p46550 Brassica napus HOM05D007344 ORTHO05D009010 1.3e-46 190.7 226 52.2
BolC6t39700H Brassica oleracea HOM05D007344 ORTHO05D009010 1.3e-46 190.7 226 52.2
BraA07t31405Z Brassica rapa HOM05D007344 ORTHO05D009010 1.3e-46 190.7 225 51.6
CARHR065180 Cardamine hirsuta HOM05D007344 ORTHO05D009010 2.1e-46 189.9 222 50.5
Carub.0002s1909 Capsella rubella HOM05D007344 ORTHO05D009010 1.4e-45 187.2 226 50.0
BcaC08g46673 Brassica carinata HOM05D007344 ORTHO05D009010 2.6e-44 183.0 220 47.7
C06p46430 Brassica napus HOM05D007344 ORTHO05D009010 2.6e-44 183.0 220 47.7
BraA07t31400Z Brassica rapa HOM05D007344 ORTHO05D009010 1.7e-43 180.3 224 46.0
BcaB03g14976 Brassica carinata HOM05D007344 ORTHO05D009010 2.9e-43 179.5 225 47.1
BcaB03g14975 Brassica carinata HOM05D007344 ORTHO05D009010 8.4e-43 177.9 225 48.9
CARHR065160 Cardamine hirsuta HOM05D007344 ORTHO05D009010 1.4e-42 177.2 214 47.2
BcaB03g14970 Brassica carinata HOM05D007344 ORTHO05D009010 4.2e-42 175.6 209 45.0
BcaC08g46678 Brassica carinata HOM05D007344 ORTHO05D009010 3.0e-40 169.5 222 47.7
C06p46540 Brassica napus HOM05D007344 ORTHO05D009010 3.0e-40 169.5 222 47.7
BolC6t39699H Brassica oleracea HOM05D007344 ORTHO05D009010 3.0e-40 169.5 222 47.7
BcaC08g46677 Brassica carinata HOM05D007344 ORTHO05D009010 5.1e-40 168.7 215 47.4
Carub.0002s1912 Capsella rubella HOM05D007344 ORTHO05D009010 6.6e-40 168.3 229 47.6
A07p38420 Brassica napus HOM05D007344 ORTHO05D009010 5.6e-39 165.2 222 47.3
BraA07t31403Z Brassica rapa HOM05D007344 ORTHO05D009010 5.6e-39 165.2 222 47.3
C06p46590 Brassica napus HOM05D007344 ORTHO05D009010 1.4e-37 160.6 222 47.7
BolC6t39705H Brassica oleracea HOM05D007344 ORTHO05D009010 1.4e-37 160.6 222 47.7
AL2G31970 Arabidopsis lyrata HOM05D007344 ORTHO05D009010 1.3e-35 154.1 161 52.2
BolC6t39691H Brassica oleracea HOM05D007344 ORTHO05D009010 3.0e-24 116.3 225 36.4
BcaC08g46681 Brassica carinata HOM05D007344 ORTHO05D032082 4.3e-23 112.5 141 46.8
C02p29790 Brassica napus HOM05D007344 ORTHO05D009010 4.3e-23 112.5 121 54.5
C06p46580 Brassica napus HOM05D007344 ORTHO05D032082 4.3e-23 112.5 141 46.8
BolC6t39703H Brassica oleracea HOM05D007344 ORTHO05D032082 4.3e-23 112.5 141 46.8
BraA09t39269Z Brassica rapa HOM05D007344 ORTHO05D009010 5.7e-23 112.1 225 38.7
BcaC03g15367 Brassica carinata HOM05D007344 ORTHO05D009010 9.6e-23 111.3 121 54.5
BcaC08g46682 Brassica carinata HOM05D007344 ORTHO05D009010 1.3e-22 110.9 171 41.5
BolC5t31464H Brassica oleracea HOM05D007344 ORTHO05D009010 1.3e-22 110.9 225 38.2
BolC6t39707H Brassica oleracea HOM05D007344 ORTHO05D009010 1.3e-22 110.9 215 38.6
A09p37590 Brassica napus HOM05D007344 ORTHO05D009010 1.6e-22 110.5 231 38.1
BcaC05g26866 Brassica carinata HOM05D007344 ORTHO05D009010 4.8e-22 109.0 225 38.2
BolC6t39694H Brassica oleracea HOM05D007344 ORTHO05D009010 1.4e-21 107.5 230 34.8
Aa31LG6G10960 Aethionema arabicum HOM05D007344 ORTHO05D009010 1.8e-21 107.1 228 37.3
C05p27460 Brassica napus HOM05D007344 ORTHO05D009010 1.8e-21 107.1 235 37.0
BcaB07g32467 Brassica carinata HOM05D007344 ORTHO05D009010 1.5e-20 104.0 233 37.3
BcaC08g46684 Brassica carinata HOM05D007344 ORTHO05D032659 2.9e-19 99.8 206 34.5
C06p46640 Brassica napus HOM05D007344 ORTHO05D032659 2.9e-19 99.8 206 34.5
BolC6t39709H Brassica oleracea HOM05D007344 ORTHO05D032659 2.9e-19 99.8 206 34.5
A07p11180 Brassica napus HOM05D007344 ORTHO05D009010 6.5e-19 98.6 229 33.6
BraA07t28908Z Brassica rapa HOM05D007344 ORTHO05D009010 6.5e-19 98.6 229 33.6
BcaC06g35373 Brassica carinata HOM05D007344 ORTHO05D009010 1.9e-18 97.1 227 31.7
C07p16850 Brassica napus HOM05D007344 ORTHO05D009010 3.2e-18 96.3 227 31.7
BcaC08g46675 Brassica carinata HOM05D007344 ORTHO05D009010 4.2e-18 95.9 92 56.5
C06p46510 Brassica napus HOM05D007344 ORTHO05D009010 4.2e-18 95.9 92 56.5
BolC7t42191H Brassica oleracea HOM05D007344 ORTHO05D009010 9.3e-18 94.7 227 31.3
THA.LOC104814041 Tarenaya hassleriana HOM05D000535 ORTHO05D009010 2.1e-17 93.6 228 36.8
C06p46470 Brassica napus HOM05D007344 ORTHO05D009010 3.0e-16 89.7 221 33.5
A07p38390 Brassica napus HOM05D007344 ORTHO05D009010 4.3e-15 85.9 219 32.0
THA.LOC104813935 Tarenaya hassleriana HOM05D000535 ORTHO05D009010 7.4e-15 85.1 232 34.5
CARHR027960 Cardamine hirsuta HOM05D007344 ORTHO05D009010 1.6e-14 84.0 227 32.6
C06p46530 Brassica napus HOM05D007344 ORTHO05D009010 2.2e-14 83.6 87 49.4
Aa31LG4G3600 Aethionema arabicum HOM05D000535 ORTHO05D000427 4.1e-13 79.3 208 33.2
THA.LOC104814040 Tarenaya hassleriana HOM05D000535 ORTHO05D009010 1.5e-12 77.4 233 32.6
Aa31LG6G10970 Aethionema arabicum HOM05D007344 ORTHO05D009010 3.8e-11 72.8 224 33.5
BcaC08g46680 Brassica carinata HOM05D007344 ORTHO05D009010 6.5e-11 72.0 66 51.5
C06p46560 Brassica napus HOM05D007344 ORTHO05D041415 6.5e-11 72.0 66 51.5
BolC6t39701H Brassica oleracea HOM05D007344 ORTHO05D041415 6.5e-11 72.0 66 51.5
Aa31sc276G90 Aethionema arabicum HOM05D007344 ORTHO05D009010 2.5e-10 70.1 175 33.7
Sp1g24730 Schrenkiella parvula HOM05D007344 ORTHO05D009010 3.0e-08 63.2 224 28.1


User provided reference genes

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