Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC03g15365 Brassica carinata HOM05D007344 ORTHO05D009010 8.0e-120 433.7 210 100.0
C02p29730 Brassica napus HOM05D007344 ORTHO05D009010 8.0e-120 433.7 210 100.0
BcaC03g15366 Brassica carinata HOM05D007344 ORTHO05D009010 2.6e-118 428.7 210 99.0
C02p29750 Brassica napus HOM05D007344 ORTHO05D009010 2.6e-118 428.7 210 99.0
BolC2t09022H Brassica oleracea HOM05D007344 ORTHO05D009010 2.6e-118 428.7 210 99.0
A02p17860 Brassica napus HOM05D007344 ORTHO05D009010 4.4e-110 401.4 213 92.5
BraA02t06836Z Brassica rapa HOM05D007344 ORTHO05D009010 4.4e-110 401.4 213 92.5
BcaB05g24739 Brassica carinata HOM05D007344 ORTHO05D009010 2.6e-102 375.6 215 87.0
BolC2t09020H Brassica oleracea HOM05D007344 ORTHO05D009010 1.5e-97 359.8 187 93.6
BcaC03g15361 Brassica carinata HOM05D007344 ORTHO05D009010 9.5e-97 357.1 211 83.4
A02p17890 Brassica napus HOM05D007344 ORTHO05D009010 9.8e-94 347.1 211 81.5
BraA02t06838Z Brassica rapa HOM05D007344 ORTHO05D009010 9.8e-94 347.1 211 81.5
BcaB05g24737 Brassica carinata HOM05D007344 ORTHO05D009010 2.0e-91 339.3 210 81.0
BcaB05g24736 Brassica carinata HOM05D007344 ORTHO05D009010 7.8e-91 337.4 210 81.4
Carub.0002s1910 Capsella rubella HOM05D007344 ORTHO05D009010 1.1e-65 253.8 216 61.1
Thhalv10019095m.g Eutrema salsugineum HOM05D007344 ORTHO05D009010 1.3e-58 230.3 215 56.7
Sp5g27360 Schrenkiella parvula HOM05D007344 ORTHO05D009010 1.3e-58 230.3 215 54.9
BolC6t39693H Brassica oleracea HOM05D007344 ORTHO05D009010 1.1e-57 227.3 215 55.8
BcaC08g46676 Brassica carinata HOM05D007344 ORTHO05D009010 1.3e-56 223.8 215 54.9
C06p46520 Brassica napus HOM05D007344 ORTHO05D009010 1.3e-56 223.8 215 54.9
BolC6t39697H Brassica oleracea HOM05D007344 ORTHO05D009010 1.3e-56 223.8 215 54.9
A07p38410 Brassica napus HOM05D007344 ORTHO05D009010 8.1e-56 221.1 216 53.7
BraA07t31402Z Brassica rapa HOM05D007344 ORTHO05D009010 8.1e-56 221.1 216 53.7
C06p46460 Brassica napus HOM05D007344 ORTHO05D009010 2.6e-54 216.1 215 53.5
BcaB02g07012 Brassica carinata HOM05D007344 ORTHO05D009010 9.9e-54 214.2 215 54.4
BcaB03g14972 Brassica carinata HOM05D007344 ORTHO05D009010 6.4e-53 211.5 217 53.0
BcaB03g14974 Brassica carinata HOM05D007344 ORTHO05D009010 6.4e-53 211.5 217 53.0
BcaB03g14973 Brassica carinata HOM05D007344 ORTHO05D009010 1.1e-52 210.7 215 52.6
Carub.0002s1914 Capsella rubella HOM05D007344 ORTHO05D009010 2.1e-51 206.5 214 52.8
AT1G72290 Arabidopsis thaliana HOM05D007344 ORTHO05D009010 3.5e-51 205.7 199 53.3
AL2G31960 Arabidopsis lyrata HOM05D007344 ORTHO05D009010 7.8e-51 204.5 213 52.6
BolC6t39698H Brassica oleracea HOM05D007344 ORTHO05D009010 1.7e-50 203.4 217 53.0
CARHR065170 Cardamine hirsuta HOM05D007344 ORTHO05D009010 1.6e-48 196.8 210 50.0
BolC6t39696H Brassica oleracea HOM05D007344 ORTHO05D009010 4.8e-48 195.3 200 51.5
A02p17920 Brassica napus HOM05D007344 ORTHO05D009010 4.5e-46 188.7 210 51.0
BraA02t06839Z Brassica rapa HOM05D007344 ORTHO05D009010 4.5e-46 188.7 210 51.0
BcaB05g24743 Brassica carinata HOM05D007344 ORTHO05D009010 7.6e-46 188.0 211 51.2
BolC2t09025H Brassica oleracea HOM05D007344 ORTHO05D009010 3.8e-45 185.7 210 50.5
BcaB05g24740 Brassica carinata HOM05D007344 ORTHO05D009010 1.1e-44 184.1 211 50.2
C02p29770 Brassica napus HOM05D007344 ORTHO05D009010 2.4e-44 183.0 210 50.0
CARHR065180 Cardamine hirsuta HOM05D007344 ORTHO05D009010 4.2e-44 182.2 213 49.3
Carub.0002s1909 Capsella rubella HOM05D007344 ORTHO05D009010 1.5e-41 173.7 218 48.2
A07p38440 Brassica napus HOM05D007344 ORTHO05D009010 1.6e-40 170.2 212 48.6
BraA07t31405Z Brassica rapa HOM05D007344 ORTHO05D009010 3.7e-40 169.1 212 48.6
BcaC08g46673 Brassica carinata HOM05D007344 ORTHO05D009010 4.8e-40 168.7 212 46.2
C06p46430 Brassica napus HOM05D007344 ORTHO05D009010 4.8e-40 168.7 212 46.2
CARHR065160 Cardamine hirsuta HOM05D007344 ORTHO05D009010 4.8e-40 168.7 209 45.9
BcaB03g14976 Brassica carinata HOM05D007344 ORTHO05D009010 8.1e-40 167.9 217 46.1
BcaB03g14970 Brassica carinata HOM05D007344 ORTHO05D009010 1.4e-39 167.2 205 43.9
BcaC08g46679 Brassica carinata HOM05D007344 ORTHO05D009010 1.8e-39 166.8 213 48.8
C06p46550 Brassica napus HOM05D007344 ORTHO05D009010 1.8e-39 166.8 213 48.8
BolC6t39700H Brassica oleracea HOM05D007344 ORTHO05D009010 1.8e-39 166.8 213 48.8
BraA07t31400Z Brassica rapa HOM05D007344 ORTHO05D009010 3.1e-39 166.0 216 44.4
BcaC08g46677 Brassica carinata HOM05D007344 ORTHO05D009010 1.2e-38 164.1 215 47.0
BcaB03g14975 Brassica carinata HOM05D007344 ORTHO05D009010 4.9e-37 158.7 212 46.2
Carub.0002s1912 Capsella rubella HOM05D007344 ORTHO05D009010 1.6e-35 153.7 221 45.7
C06p46590 Brassica napus HOM05D007344 ORTHO05D009010 6.0e-35 151.8 214 47.2
BolC6t39705H Brassica oleracea HOM05D007344 ORTHO05D009010 6.0e-35 151.8 214 47.2
BcaC08g46678 Brassica carinata HOM05D007344 ORTHO05D009010 8.7e-34 147.9 209 45.0
C06p46540 Brassica napus HOM05D007344 ORTHO05D009010 8.7e-34 147.9 209 45.0
BolC6t39699H Brassica oleracea HOM05D007344 ORTHO05D009010 8.7e-34 147.9 209 45.0
AL2G31970 Arabidopsis lyrata HOM05D007344 ORTHO05D009010 9.6e-33 144.4 153 50.3
A07p38420 Brassica napus HOM05D007344 ORTHO05D009010 1.6e-32 143.7 209 44.5
BraA07t31403Z Brassica rapa HOM05D007344 ORTHO05D009010 1.6e-32 143.7 209 44.5
BcaC08g46681 Brassica carinata HOM05D007344 ORTHO05D032082 4.1e-23 112.5 141 46.8
C02p29790 Brassica napus HOM05D007344 ORTHO05D009010 4.1e-23 112.5 121 54.5
C06p46580 Brassica napus HOM05D007344 ORTHO05D032082 4.1e-23 112.5 141 46.8
BolC6t39703H Brassica oleracea HOM05D007344 ORTHO05D032082 4.1e-23 112.5 141 46.8
BcaC03g15367 Brassica carinata HOM05D007344 ORTHO05D009010 9.0e-23 111.3 121 54.5
BraA09t39269Z Brassica rapa HOM05D007344 ORTHO05D009010 1.9e-20 103.6 204 39.2
A09p37590 Brassica napus HOM05D007344 ORTHO05D009010 3.2e-20 102.8 204 39.2
BolC5t31464H Brassica oleracea HOM05D007344 ORTHO05D009010 4.2e-20 102.4 218 37.6
BolC6t39691H Brassica oleracea HOM05D007344 ORTHO05D009010 9.4e-20 101.3 212 34.4
BcaC05g26866 Brassica carinata HOM05D007344 ORTHO05D009010 1.6e-19 100.5 218 37.6
BcaC08g46682 Brassica carinata HOM05D007344 ORTHO05D009010 2.7e-19 99.8 163 40.5
BolC6t39707H Brassica oleracea HOM05D007344 ORTHO05D009010 3.6e-19 99.4 207 37.7
C05p27460 Brassica napus HOM05D007344 ORTHO05D009010 6.1e-19 98.6 228 36.4
BcaB07g32467 Brassica carinata HOM05D007344 ORTHO05D009010 3.9e-18 95.9 206 38.3
BcaC08g46675 Brassica carinata HOM05D007344 ORTHO05D009010 3.9e-18 95.9 92 56.5
C06p46510 Brassica napus HOM05D007344 ORTHO05D009010 3.9e-18 95.9 92 56.5
Aa31LG6G10960 Aethionema arabicum HOM05D007344 ORTHO05D009010 6.7e-18 95.1 221 36.2
BolC6t39694H Brassica oleracea HOM05D007344 ORTHO05D009010 8.8e-18 94.7 222 32.9
A07p11180 Brassica napus HOM05D007344 ORTHO05D009010 7.4e-17 91.7 217 34.1
BraA07t28908Z Brassica rapa HOM05D007344 ORTHO05D009010 7.4e-17 91.7 217 34.1
BcaC08g46684 Brassica carinata HOM05D007344 ORTHO05D032659 3.7e-16 89.4 198 33.3
C06p46640 Brassica napus HOM05D007344 ORTHO05D032659 3.7e-16 89.4 198 33.3
BolC6t39709H Brassica oleracea HOM05D007344 ORTHO05D032659 3.7e-16 89.4 198 33.3
BcaC06g35373 Brassica carinata HOM05D007344 ORTHO05D009010 8.2e-16 88.2 215 31.6
C07p16850 Brassica napus HOM05D007344 ORTHO05D009010 1.4e-15 87.4 215 31.6
BolC7t42191H Brassica oleracea HOM05D007344 ORTHO05D009010 6.9e-15 85.1 215 31.2
THA.LOC104814041 Tarenaya hassleriana HOM05D000535 ORTHO05D009010 3.4e-14 82.8 217 35.0
C06p46470 Brassica napus HOM05D007344 ORTHO05D009010 7.7e-14 81.6 173 33.5
THA.LOC104813935 Tarenaya hassleriana HOM05D000535 ORTHO05D009010 5.5e-12 75.5 203 35.0
A07p38390 Brassica napus HOM05D007344 ORTHO05D009010 7.2e-12 75.1 163 33.1
C06p46530 Brassica napus HOM05D007344 ORTHO05D009010 1.2e-11 74.3 83 47.0
Aa31LG4G3600 Aethionema arabicum HOM05D000535 ORTHO05D000427 3.6e-11 72.8 200 33.5
CARHR027960 Cardamine hirsuta HOM05D007344 ORTHO05D009010 3.6e-11 72.8 205 32.7
BcaC08g46680 Brassica carinata HOM05D007344 ORTHO05D009010 6.1e-11 72.0 66 51.5
C06p46560 Brassica napus HOM05D007344 ORTHO05D041415 6.1e-11 72.0 66 51.5
BolC6t39701H Brassica oleracea HOM05D007344 ORTHO05D041415 6.1e-11 72.0 66 51.5
THA.LOC104814040 Tarenaya hassleriana HOM05D000535 ORTHO05D009010 1.0e-10 71.2 203 34.0
Aa31LG6G10970 Aethionema arabicum HOM05D007344 ORTHO05D009010 9.7e-09 64.7 182 35.2
Aa31sc276G90 Aethionema arabicum HOM05D007344 ORTHO05D009010 8.2e-08 61.6 131 38.2


User provided reference genes

Program Settings