Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C02p28970 Brassica napus HOM05D005625 ORTHO05D022022 2.7e-123 445.3 218 100.0
A02p17310 Brassica napus HOM05D005625 ORTHO05D022022 2.5e-44 183.0 95 97.9
BraA02t06779Z Brassica rapa HOM05D005625 ORTHO05D022022 2.5e-44 183.0 95 97.9
BolC2t08946H Brassica oleracea HOM05D005625 ORTHO05D022022 8.5e-32 141.4 73 97.3
C03p01540 Brassica napus HOM05D034479 ORTHO05D032130 1.1e-26 124.4 105 63.8
BraA07t31336Z Brassica rapa HOM05D005625 ORTHO05D007564 7.7e-25 118.2 100 67.0
A07p37730 Brassica napus HOM05D005625 ORTHO05D007564 1.3e-24 117.5 100 67.0
Sp5g26600 Schrenkiella parvula HOM05D005625 ORTHO05D007564 1.3e-24 117.5 100 66.0
C06p45600 Brassica napus HOM05D005625 ORTHO05D007564 2.9e-24 116.3 100 65.0
Thhalv10018392m.g Eutrema salsugineum HOM05D005625 ORTHO05D007564 5.0e-24 115.5 100 65.0
CARHR291240 Cardamine hirsuta HOM05D005625 ORTHO05D007564 6.5e-24 115.2 88 71.6
Carub.0002s1829 Capsella rubella HOM05D005625 ORTHO05D007564 1.1e-23 114.4 100 64.0
AT1G71440 Arabidopsis thaliana HOM05D005625 ORTHO05D007564 1.4e-23 114.0 88 70.5
AL2G31100 Arabidopsis lyrata HOM05D005625 ORTHO05D007564 3.2e-23 112.8 100 64.0
BcaC08g46580 Brassica carinata HOM05D005625 ORTHO05D007564 3.2e-23 112.8 88 69.3
BolC6t39611H Brassica oleracea HOM05D005625 ORTHO05D007564 3.2e-23 112.8 88 69.3
BcaC04g19964 Brassica carinata HOM05D034479 ORTHO05D032130 4.7e-22 109.0 57 93.0
Aa31LG4G9140 Aethionema arabicum HOM05D005625 ORTHO05D007564 3.0e-21 106.3 100 60.0
THA.LOC104810982 Tarenaya hassleriana HOM05D005625 ORTHO05D007564 6.7e-21 105.1 112 53.6
CANSAT56G1751 Cannabis sativa HOM05D005625 ORTHO05D007564 6.3e-19 98.6 114 51.8
Cpa.g.sc21.80 Carica papaya HOM05D005625 ORTHO05D007564 1.8e-18 97.1 88 61.4
Manes.18G118300 Manihot esculenta HOM05D005625 ORTHO05D007564 1.2e-17 94.4 72 66.7
Thecc.08G177300 Theobroma cacao HOM05D005625 ORTHO05D007564 2.6e-17 93.2 81 61.7
QL09p002063 Quercus lobata HOM05D005625 ORTHO05D007564 3.5e-17 92.8 84 59.5
RcHm_v2.0_Chr7g0232101 Rosa chinensis HOM05D005625 ORTHO05D007564 4.5e-17 92.4 72 68.1
TWI18G0532 Tripterygium wilfordii HOM05D005625 ORTHO05D007564 4.5e-17 92.4 88 58.0
TAR381G1540 Trochodendron aralioides HOM05D005625 ORTHO05D007564 5.9e-17 92.0 72 62.5
DCAR_017431 Daucus carota HOM05D005625 ORTHO05D007564 7.7e-17 91.7 72 66.7
Sc14g0005960 Simmondsia chinensis HOM05D005625 ORTHO05D007564 1.0e-16 91.3 72 65.3
unitig_578.g16118 Utricularia gibba HOM05D005625 ORTHO05D007564 1.0e-16 91.3 88 56.8
Haze_13951 Corylus avellana HOM05D005625 ORTHO05D007564 1.3e-16 90.9 115 47.0
Prupe.1G544200 Prunus persica HOM05D005625 ORTHO05D007564 1.3e-16 90.9 83 59.0
arahy.Tifrunner.gnm1.ann1.0NEN23 Arachis hypogaea HOM05D005625 ORTHO05D007564 2.2e-16 90.1 98 50.0
Dinv16108 Davidia involucrata HOM05D005625 ORTHO05D007564 2.9e-16 89.7 72 65.3
FvH4_5g33370 Fragaria vesca HOM05D005625 ORTHO05D007564 2.9e-16 89.7 72 65.3
FAN04G0928 Fragaria x ananassa HOM05D005625 ORTHO05D007564 2.9e-16 89.7 72 65.3
FAN18G2766 Fragaria x ananassa HOM05D005625 ORTHO05D007564 2.9e-16 89.7 72 65.3
Cfa008087 Carpinus fangiana HOM05D005625 ORTHO05D007564 3.8e-16 89.4 74 62.2
Potri.019G072700 Populus trichocarpa HOM05D005625 ORTHO05D007564 3.8e-16 89.4 89 53.9
MSTRG.25496 Avicennia marina HOM05D005625 ORTHO05D007564 5.0e-16 89.0 88 55.7
BcaB01g05833 Brassica carinata HOM05D034479 ORTHO05D032130 5.0e-16 89.0 58 79.3
Lj7C421T14 Lonicera japonica HOM05D005625 ORTHO05D007564 5.0e-16 89.0 72 62.5
GSVIVG01036380001 Vitis vinifera HOM05D005625 ORTHO05D007564 5.0e-16 89.0 72 62.5
MELO3C011830.2 Cucumis melo HOM05D005625 ORTHO05D007564 6.5e-16 88.6 72 63.9
CsaV3_1G044090 Cucumis sativus L. HOM05D005625 ORTHO05D007564 6.5e-16 88.6 72 63.9
Nn5g27281 Nelumbo nucifera HOM05D005625 ORTHO05D007564 8.5e-16 88.2 72 58.3
Oeu028924.1 Olea europaea HOM05D005625 ORTHO05D007564 8.5e-16 88.2 88 54.5
Phvul.006G130900 Phaseolus vulgaris HOM05D005625 ORTHO05D007564 8.5e-16 88.2 84 53.6
TPR.G17519 Trifolium pratense HOM05D005625 ORTHO05D007564 8.5e-16 88.2 103 46.6
arahy.Tifrunner.gnm1.ann1.U40EKY Arachis hypogaea HOM05D005625 ORTHO05D007564 1.1e-15 87.8 83 54.2
AUR62024898 Chenopodium quinoa HOM05D005625 ORTHO05D007564 1.1e-15 87.8 88 54.5
AUR62030641 Chenopodium quinoa HOM05D005625 ORTHO05D007564 1.1e-15 87.8 88 54.5
Eucgr.K01840 Eucalyptus grandis HOM05D005625 ORTHO05D007564 1.1e-15 87.8 88 53.4
Rhsim02G0173300 Rhododendron simsii HOM05D005625 ORTHO05D007564 1.1e-15 87.8 72 65.3
Sabra15G0066000 Salix brachista HOM05D005625 ORTHO05D007564 1.1e-15 87.8 89 52.8
Sabra15G0066200 Salix brachista HOM05D005625 ORTHO05D007564 1.1e-15 87.8 89 52.8
arahy.Tifrunner.gnm1.ann1.I4CKLR Arachis hypogaea HOM05D005625 ORTHO05D007564 1.5e-15 87.4 81 55.6
CSS0007097 Camellia sinensis var. sinensis HOM05D005625 ORTHO05D007564 1.5e-15 87.4 71 64.8
DCAR_006209 Daucus carota HOM05D005625 ORTHO05D007564 1.5e-15 87.4 72 63.9
Duzib177G0227 Durio zibethinus HOM05D005625 ORTHO05D007564 1.5e-15 87.4 73 63.0
Sabra19G0084000 Salix brachista HOM05D005625 ORTHO05D007564 1.5e-15 87.4 72 59.7
CiPaw.04G063100 Carya illinoinensis HOM05D005625 ORTHO05D007564 1.9e-15 87.0 72 61.1
Gohir.A13G116000 Gossypium hirsutum HOM05D005625 ORTHO05D007564 1.9e-15 87.0 72 62.5
Gorai.013G133700 Gossypium raimondii HOM05D005625 ORTHO05D007564 1.9e-15 87.0 72 62.5
Actinidia29383 Actinidia chinensis HOM05D005625 ORTHO05D007564 2.5e-15 86.7 71 64.8
Aqoxy5G00836 Aquilegia oxysepala HOM05D005625 ORTHO05D007564 2.5e-15 86.7 83 54.2
arahy.Tifrunner.gnm1.ann1.23CDJN Arachis hypogaea HOM05D005625 ORTHO05D007564 2.5e-15 86.7 81 55.6
Cc10_g08740 Coffea canephora HOM05D005625 ORTHO05D007564 2.5e-15 86.7 72 62.5
Gohir.D13G119200 Gossypium hirsutum HOM05D005625 ORTHO05D007564 3.2e-15 86.3 72 62.5
Peaxi162Scf00078g00533 Petunia axillaris HOM05D005625 ORTHO05D007564 3.2e-15 86.3 71 62.0
PSO170G6063 Papaver somniferum HOM05D005625 ORTHO05D007564 5.5e-15 85.5 72 56.9
VMungo0540G1936 Vigna mungo HOM05D005625 ORTHO05D007564 5.5e-15 85.5 84 51.2
Ah.02g127420 Amaranthus hybridus HOM05D005625 ORTHO05D007564 7.2e-15 85.1 88 54.5
EL10Ac6g14591 Beta vulgaris HOM05D005625 ORTHO05D007564 7.2e-15 85.1 79 54.4
PSO017G2953 Papaver somniferum HOM05D005625 ORTHO05D007564 7.2e-15 85.1 72 58.3
Zm00001eb233200 Zea mays HOM05D005625 ORTHO05D007564 9.4e-15 84.7 83 49.4
Ca_07151_v3 Cicer arietinum L. HOM05D005625 ORTHO05D007564 1.2e-14 84.3 103 43.7
MBI03_g28415_MAGBIO Magnolia biondii HOM05D005625 ORTHO05D007564 1.2e-14 84.3 72 56.9
Solyc11g042470.1 Solanum lycopersicum HOM05D005625 ORTHO05D007564 1.2e-14 84.3 72 59.7
TPR.G26547 Trifolium pratense HOM05D005625 ORTHO05D022022 1.2e-14 84.3 103 43.7
Ciclev10014850m.g Citrus clementina HOM05D005625 ORTHO05D007564 1.6e-14 84.0 72 59.7
Migut.C01373 Erythranthe guttata HOM05D005625 ORTHO05D007564 1.6e-14 84.0 88 51.1
Glyma.09G021200 Glycine max HOM05D005625 ORTHO05D007564 1.6e-14 84.0 84 50.0
MD15G1395400 Malus domestica HOM05D005625 ORTHO05D007564 1.6e-14 84.0 83 55.4
Nitab4.5_0001155g0010 Nicotiana tabacum HOM05D005625 ORTHO05D007564 1.6e-14 84.0 71 60.6
Medtr2g029250 Medicago truncatula HOM05D005625 ORTHO05D007564 2.1e-14 83.6 72 56.9
Lsat_1_v5_gn_2_82040 Lactuca sativa HOM05D005625 ORTHO05D007564 2.7e-14 83.2 72 63.9
Sed0019265 Sechium edule HOM05D005625 ORTHO05D007564 2.7e-14 83.2 72 61.1
SGA_v2.0_scaffold118G32606 Striga asiatica HOM05D005625 ORTHO05D007564 2.7e-14 83.2 88 50.0
HanXRQChr11g0326321 Helianthus annuus HOM05D005625 ORTHO05D007564 3.6e-14 82.8 88 52.3
Sopen11g018630 Solanum pennellii HOM05D005625 ORTHO05D007564 3.6e-14 82.8 72 58.3
Ca_00793_v3 Cicer arietinum L. HOM05D005625 ORTHO05D007564 6.1e-14 82.0 72 54.2
COL.COLO4_24882 Corchorus olitorius HOM05D005625 ORTHO05D007564 6.1e-14 82.0 84 52.4
ECA232G1187 Erigeron canadensis HOM05D005625 ORTHO05D007564 1.0e-13 81.3 88 51.1
Lalb_Chr15g0088631 Lupinus albus HOM05D005625 ORTHO05D007564 1.0e-13 81.3 72 59.7
CAN.G990.6 Capsicum annuum HOM05D005625 ORTHO05D007564 1.8e-13 80.5 71 59.2
Glyma.15G127633 Glycine max HOM05D005625 ORTHO05D007564 2.3e-13 80.1 72 52.8
SHI16719 Sapria himalayana HOM05D005625 ORTHO05D007564 2.3e-13 80.1 98 44.9
Lj6g0017830 Lotus japonicus HOM05D005625 ORTHO05D007564 8.8e-13 78.2 72 54.2
Os05g0105300 Oryza sativa ssp. japonica HOM05D005625 ORTHO05D007564 1.5e-12 77.4 79 48.1
BolC2t08947H Brassica oleracea HOM05D005625 ORTHO05D022022 4.4e-12 75.9 36 97.2
Psat1g169440 Pisum sativum HOM05D005625 ORTHO05D007564 5.7e-12 75.5 72 50.0
BcaB04g17633 Brassica carinata HOM05D005625 ORTHO05D007564 3.7e-11 72.8 58 67.2
PGR044G1301 Punica granatum HOM05D005625 ORTHO05D007564 3.7e-11 72.8 88 46.6
ATR1089G039 Amborella trichopoda HOM05D005625 ORTHO05D007564 1.4e-10 70.9 88 42.0
C04p09470 Brassica napus HOM05D014669 ORTHO05D017643 1.8e-10 70.5 47 74.5
HPP92_015711 Vanilla planifolia HOM05D005625 ORTHO05D007564 1.8e-10 70.5 72 47.2
HPP92_026650 Vanilla planifolia HOM05D005625 ORTHO05D007564 3.1e-10 69.7 72 47.2
SMO145G0237 Selaginella moellendorffii HOM05D005625 ORTHO05D007564 1.6e-09 67.4 77 40.3
ClCG03G011750 Citrullus lanatus HOM05D005625 ORTHO05D007564 2.7e-09 66.6 56 62.5
BcaC02g11964 Brassica carinata HOM05D014669 ORTHO05D017643 4.5e-09 65.9 36 86.1
PGSC0003DMG400019987 Solanum tuberosum HOM05D005625 ORTHO05D007564 1.0e-08 64.7 56 58.9
AagrBONN_evm.TU.Sc2ySwM_344.4267 Anthoceros agrestis HOM05D005625 ORTHO05D007564 1.5e-07 60.8 80 40.0
Mapoly0057s0080 Marchantia polymorpha HOM05D005625 ORTHO05D007564 3.6e-06 56.2 73 38.4
Pp3c13_4420 Physcomitrium patens HOM05D005625 ORTHO05D007564 4.7e-06 55.8 100 31.0


User provided reference genes

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