Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C02p28800 Brassica napus HOM05D001070 ORTHO05D005132 5.2e-199 697.6 367 100.0
C07p33480 Brassica napus HOM05D001070 ORTHO05D005132 5.2e-199 697.6 367 100.0
BolSC29t60512H Brassica oleracea HOM05D001070 ORTHO05D005132 4.1e-196 688.0 366 96.7
BolSC35t60686H Brassica oleracea HOM05D001070 ORTHO05D005132 4.1e-196 688.0 366 96.7
BraSC143t45654Z Brassica rapa HOM05D001070 ORTHO05D005132 1.6e-195 686.0 367 96.5
BraSC59t46556Z Brassica rapa HOM05D001070 ORTHO05D005132 1.6e-195 686.0 367 96.5
BolSC45t60903H Brassica oleracea HOM05D001070 ORTHO05D005132 1.3e-194 682.9 364 96.7
C05p53850 Brassica napus HOM05D001070 ORTHO05D005132 2.3e-178 629.0 336 97.6
BcaB03g16407 Brassica carinata HOM05D001070 ORTHO05D005132 3.3e-177 625.2 367 89.4
BolSC37t60799H Brassica oleracea HOM05D001070 ORTHO05D005132 6.7e-130 468.0 257 95.3
PGR111G0057 Punica granatum HOM05D001070 ORTHO05D002096 9.3e-108 394.4 387 57.4
Hma1.2p1_0096F.1_g047620 Hydrangea macrophylla HOM05D001070 ORTHO05D005132 1.3e-96 357.5 389 50.9
Peaxi162Scf01305g00038 Petunia axillaris HOM05D001070 ORTHO05D005132 2.2e-93 346.7 395 50.9
Solyc00g500042.1 Solanum lycopersicum HOM05D001070 ORTHO05D005132 3.2e-92 342.8 387 50.1
Nn1g08629 Nelumbo nucifera HOM05D001070 ORTHO05D005132 9.7e-89 331.3 396 48.7
Nn4g25224 Nelumbo nucifera HOM05D001070 ORTHO05D005132 6.5e-85 318.5 389 46.3
PSO548G0067 Papaver somniferum HOM05D001070 ORTHO05D002096 1.0e-82 311.2 396 46.2
PSO063G4510 Papaver somniferum HOM05D001070 ORTHO05D005132 3.8e-77 292.7 396 44.2
Solyc00g500125.1 Solanum lycopersicum HOM05D001070 ORTHO05D005132 5.5e-76 288.9 387 44.7
ClCG11G009240 Citrullus lanatus HOM05D001070 ORTHO05D005132 6.1e-75 285.4 386 45.9
BolC2t10603H Brassica oleracea HOM05D001070 ORTHO05D005132 4.4e-73 279.3 158 91.8
DCAR_032544 Daucus carota HOM05D001070 ORTHO05D002096 5.9e-70 268.9 384 43.5
SalBow1G2240 Salvia bowleyana HOM05D001070 ORTHO05D005132 3.8e-69 266.2 360 44.7
Lalb_Chr07g0191841 Lupinus albus HOM05D001070 ORTHO05D002096 5.0e-69 265.8 405 42.7
arahy.Tifrunner.gnm1.ann1.B1X1LX Arachis hypogaea HOM05D001070 ORTHO05D005132 5.9e-62 242.3 398 39.7
HanXRQChr13g0413611 Helianthus annuus HOM05D001070 ORTHO05D005132 3.3e-60 236.5 391 41.7
Migut.D01247 Erythranthe guttata HOM05D001070 ORTHO05D005132 9.5e-60 235.0 298 47.3
HanXRQChr00c0336g0573711 Helianthus annuus HOM05D001070 ORTHO05D005132 4.0e-58 229.6 383 41.3
HanXRQChr00c0703g0576911 Helianthus annuus HOM05D001070 ORTHO05D005132 4.0e-58 229.6 383 41.3
HanXRQChr02g0059751 Helianthus annuus HOM05D001070 ORTHO05D005132 4.0e-58 229.6 383 41.3
HanXRQChr09g0258471 Helianthus annuus HOM05D001070 ORTHO05D005132 4.0e-58 229.6 383 41.3
HanXRQChr15g0465411 Helianthus annuus HOM05D001070 ORTHO05D005132 4.0e-58 229.6 383 41.3
HanXRQChr15g0465481 Helianthus annuus HOM05D001070 ORTHO05D005132 4.0e-58 229.6 383 41.3
HanXRQChr17g0569701 Helianthus annuus HOM05D001070 ORTHO05D005132 4.0e-58 229.6 383 41.3
HanXRQCPg0580321 Helianthus annuus HOM05D001070 ORTHO05D005132 4.0e-58 229.6 383 41.3
HanXRQChr03g0087621 Helianthus annuus HOM05D001070 ORTHO05D005132 2.2e-56 223.8 375 42.1
Peaxi162Scf00030g02112 Petunia axillaris HOM05D001070 ORTHO05D005132 1.9e-52 210.7 270 48.9
Hund08794 Selenicereus undatus HOM05D001070 ORTHO05D005132 1.6e-43 181.0 371 34.5
Hund12717 Selenicereus undatus HOM05D001070 ORTHO05D005132 1.6e-43 181.0 371 34.5
Hund12844 Selenicereus undatus HOM05D001070 ORTHO05D005132 1.6e-43 181.0 371 34.5
Hund23969 Selenicereus undatus HOM05D001070 ORTHO05D005132 1.6e-43 181.0 371 34.5
Hund27677 Selenicereus undatus HOM05D001070 ORTHO05D005132 1.6e-43 181.0 371 34.5
Hund27830 Selenicereus undatus HOM05D001070 ORTHO05D005132 1.6e-43 181.0 371 34.5
Hund27882 Selenicereus undatus HOM05D001070 ORTHO05D005132 1.6e-43 181.0 371 34.5
Hund28329 Selenicereus undatus HOM05D001070 ORTHO05D005132 1.6e-43 181.0 371 34.5
Hund28437 Selenicereus undatus HOM05D001070 ORTHO05D005132 1.6e-43 181.0 371 34.5
Hund28449 Selenicereus undatus HOM05D001070 ORTHO05D005132 1.6e-43 181.0 371 34.5
Hund28598 Selenicereus undatus HOM05D001070 ORTHO05D005132 1.6e-43 181.0 371 34.5
Hund28612 Selenicereus undatus HOM05D001070 ORTHO05D005132 1.6e-43 181.0 371 34.5
Hund28879 Selenicereus undatus HOM05D001070 ORTHO05D005132 1.6e-43 181.0 371 34.5
Hund28938 Selenicereus undatus HOM05D001070 ORTHO05D005132 1.6e-43 181.0 371 34.5
Hund28947 Selenicereus undatus HOM05D001070 ORTHO05D005132 1.6e-43 181.0 371 34.5
Hund28953 Selenicereus undatus HOM05D001070 ORTHO05D005132 1.6e-43 181.0 371 34.5
Hund28962 Selenicereus undatus HOM05D001070 ORTHO05D005132 1.6e-43 181.0 371 34.5
Hund28978 Selenicereus undatus HOM05D001070 ORTHO05D005132 1.6e-43 181.0 371 34.5
Hund29178 Selenicereus undatus HOM05D001070 ORTHO05D005132 1.6e-43 181.0 371 34.5
Hund29187 Selenicereus undatus HOM05D001070 ORTHO05D005132 1.6e-43 181.0 371 34.5
Hund29245 Selenicereus undatus HOM05D001070 ORTHO05D005132 1.6e-43 181.0 371 34.5
Hund29246 Selenicereus undatus HOM05D001070 ORTHO05D005132 1.6e-43 181.0 371 34.5
Hund29252 Selenicereus undatus HOM05D001070 ORTHO05D005132 1.6e-43 181.0 371 34.5
Hund29274 Selenicereus undatus HOM05D001070 ORTHO05D005132 1.6e-43 181.0 371 34.5
Hund29278 Selenicereus undatus HOM05D001070 ORTHO05D005132 1.6e-43 181.0 371 34.5
Hund29282 Selenicereus undatus HOM05D001070 ORTHO05D005132 1.6e-43 181.0 371 34.5
Hund29286 Selenicereus undatus HOM05D001070 ORTHO05D005132 1.6e-43 181.0 371 34.5
Hund29287 Selenicereus undatus HOM05D001070 ORTHO05D005132 1.6e-43 181.0 371 34.5
Hund29315 Selenicereus undatus HOM05D001070 ORTHO05D005132 1.6e-43 181.0 371 34.5
Hund29440 Selenicereus undatus HOM05D001070 ORTHO05D005132 1.6e-43 181.0 371 34.5
Hund29712 Selenicereus undatus HOM05D001070 ORTHO05D005132 1.6e-43 181.0 371 34.5
Hund29754 Selenicereus undatus HOM05D001070 ORTHO05D005132 1.6e-43 181.0 371 34.5
Hund29819 Selenicereus undatus HOM05D001070 ORTHO05D005132 1.6e-43 181.0 371 34.5
Hund30035 Selenicereus undatus HOM05D001070 ORTHO05D005132 1.6e-43 181.0 371 34.5
Hund30119 Selenicereus undatus HOM05D001070 ORTHO05D005132 1.6e-43 181.0 371 34.5
Hund30176 Selenicereus undatus HOM05D001070 ORTHO05D005132 1.6e-43 181.0 371 34.5
Hund30366 Selenicereus undatus HOM05D001070 ORTHO05D005132 1.6e-43 181.0 371 34.5
FvH4_c3g00020 Fragaria vesca HOM05D000533 ORTHO05D001069 5.2e-42 176.0 184 52.2
Medtr7g021690 Medicago truncatula HOM05D001070 ORTHO05D005132 1.4e-39 167.9 386 33.7
Gohir.1Z049494 Gossypium hirsutum HOM05D001070 ORTHO05D005132 1.9e-39 167.5 301 39.2
Gohir.D11G334275 Gossypium hirsutum HOM05D001070 ORTHO05D005132 1.6e-38 164.5 301 38.2
Gohir.A09G039280 Gossypium hirsutum HOM05D001070 ORTHO05D005132 6.0e-38 162.5 304 37.5
Gohir.D11G237240 Gossypium hirsutum HOM05D001070 ORTHO05D005132 5.1e-37 159.5 301 37.2
Gorai.004G219800 Gossypium raimondii HOM05D001070 ORTHO05D005132 2.4e-34 150.6 301 36.2
Gorai.010G136000 Gossypium raimondii HOM05D001070 ORTHO05D005132 3.2e-31 140.2 236 42.8
MELO3C027053.2 Cucumis melo HOM05D001070 ORTHO05D005132 6.6e-29 132.5 158 48.7
Gorai.002G047700 Gossypium raimondii HOM05D001070 ORTHO05D005132 1.6e-27 127.9 198 45.5
HanXRQChr17g0569771 Helianthus annuus HOM05D001070 ORTHO05D005132 1.8e-26 124.4 235 41.3
Gohir.A09G045792 Gossypium hirsutum HOM05D001070 ORTHO05D005132 2.2e-24 117.5 144 50.7
Glyma.18G155800 Glycine max HOM05D001070 ORTHO05D005132 4.9e-24 116.3 215 39.1
Hund28952 Selenicereus undatus HOM05D001070 ORTHO05D005132 4.9e-24 116.3 332 29.5
Nn3g17667 Nelumbo nucifera HOM05D000388 ORTHO05D000473 1.4e-23 114.8 165 46.7
Nitab4.5_0006409g0070 Nicotiana tabacum HOM05D001070 ORTHO05D010350 1.4e-23 114.8 174 42.0
Solyc11g021240.3 Solanum lycopersicum HOM05D001070 ORTHO05D005132 4.2e-23 113.2 98 58.2
Gohir.A02G108504 Gossypium hirsutum HOM05D001070 ORTHO05D005132 1.3e-21 108.2 102 57.8
Hund27629 Selenicereus undatus HOM05D001070 ORTHO05D005132 2.3e-21 107.5 298 29.9
Hund28588 Selenicereus undatus HOM05D001070 ORTHO05D005132 2.3e-21 107.5 298 29.9
Hund28975 Selenicereus undatus HOM05D001070 ORTHO05D005132 2.3e-21 107.5 298 29.9
Hund29088 Selenicereus undatus HOM05D001070 ORTHO05D005132 2.3e-21 107.5 298 29.9
Hund29110 Selenicereus undatus HOM05D001070 ORTHO05D005132 2.3e-21 107.5 298 29.9
Hund29253 Selenicereus undatus HOM05D001070 ORTHO05D005132 2.3e-21 107.5 298 29.9
Hund30040 Selenicereus undatus HOM05D001070 ORTHO05D005132 2.3e-21 107.5 298 29.9
Hund29432 Selenicereus undatus HOM05D001070 ORTHO05D005132 6.6e-21 105.9 330 29.1
Hund29025 Selenicereus undatus HOM05D001070 ORTHO05D005132 1.1e-20 105.1 297 29.6
Medtr2g039370 Medicago truncatula HOM05D001070 ORTHO05D005132 2.5e-20 104.0 140 45.0
Medtr8g093760 Medicago truncatula HOM05D001070 ORTHO05D005132 3.3e-20 103.6 232 30.6
Gohir.D08G133232 Gossypium hirsutum HOM05D001070 ORTHO05D005132 5.6e-20 102.8 184 39.7
Medtr6g042180 Medicago truncatula HOM05D001070 ORTHO05D005132 9.6e-20 102.1 92 54.3
Gorai.004G136300 Gossypium raimondii HOM05D001070 ORTHO05D005132 3.6e-19 100.1 184 39.1
EL10As1g23055 Beta vulgaris HOM05D001070 ORTHO05D005132 6.2e-19 99.4 180 36.1
Gorai.006G079500 Gossypium raimondii HOM05D001070 ORTHO05D005132 1.8e-18 97.8 102 53.9
arahy.Tifrunner.gnm1.ann1.1Y8W5R Arachis hypogaea HOM05D001070 ORTHO05D018510 5.3e-18 96.3 88 55.7
Peaxi162Scf00080g00527 Petunia axillaris HOM05D001070 ORTHO05D036944 3.4e-17 93.6 146 40.4
Hund29500 Selenicereus undatus HOM05D001070 ORTHO05D005132 9.9e-17 92.0 156 35.3
Hund28852 Selenicereus undatus HOM05D001070 ORTHO05D005132 1.4e-15 88.2 147 36.7
GSVIVG01019173001 Vitis vinifera HOM05D000216 ORTHO05D000634 1.9e-15 87.8 115 47.0
SEGI_27427 Sequoiadendron giganteum HOM05D009451 ORTHO05D015743 7.1e-15 85.9 227 32.2
SEGI_20187 Sequoiadendron giganteum HOM05D009451 ORTHO05D015743 1.6e-14 84.7 227 31.7
SEGI_30878 Sequoiadendron giganteum HOM05D009451 ORTHO05D015743 1.6e-14 84.7 227 31.7
SEGI_36485 Sequoiadendron giganteum HOM05D009451 ORTHO05D015743 1.6e-14 84.7 227 31.7
EL10Ac1g01959 Beta vulgaris HOM05D001070 ORTHO05D005132 7.9e-14 82.4 93 48.4
SEGI_38135 Sequoiadendron giganteum HOM05D009451 ORTHO05D015743 1.8e-13 81.3 216 32.4
Hund28911 Selenicereus undatus HOM05D001070 ORTHO05D005132 3.0e-13 80.5 297 28.6
SEGI_01987 Sequoiadendron giganteum HOM05D009451 ORTHO05D015743 3.9e-13 80.1 227 30.8
Lju5009P0T28 Lonicera japonica HOM05D001070 ORTHO05D005132 1.5e-12 78.2 309 31.4
arahy.Tifrunner.gnm1.ann1.LH3NEH Arachis hypogaea HOM05D001070 ORTHO05D005132 1.9e-12 77.8 289 28.7
Gohir.D09G079833 Gossypium hirsutum HOM05D001070 ORTHO05D005132 7.4e-12 75.9 68 54.4
arahy.Tifrunner.gnm1.ann1.IUHB90 Arachis hypogaea HOM05D001070 ORTHO05D005132 4.8e-11 73.2 93 44.1
Medtr7g104140 Medicago truncatula HOM05D001070 ORTHO05D005132 1.1e-10 72.0 72 51.4
BolC7t43860H Brassica oleracea HOM05D001070 ORTHO05D005132 1.4e-10 71.6 34 97.1
PSO357G0618 Papaver somniferum HOM05D001070 ORTHO05D005132 3.1e-10 70.5 83 48.2
Medtr1g051590 Medicago truncatula HOM05D000533 ORTHO05D001069 4.5e-09 66.6 156 34.6
RcHm_v2.0_Chr7g0212321 Rosa chinensis HOM05D001070 ORTHO05D005132 1.7e-08 64.7 51 60.8
Nn029s41576 Nelumbo nucifera HOM05D001070 ORTHO05D005132 4.9e-08 63.2 81 45.7
Solyc07g041680.2 Solanum lycopersicum HOM05D001070 ORTHO05D005132 6.4e-08 62.8 54 55.6
Nitab4.5_0007104g0080 Nicotiana tabacum HOM05D001070 ORTHO05D005132 2.4e-07 60.8 45 62.2


User provided reference genes

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