Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C02p28780 Brassica napus HOM05D001070 ORTHO05D010233 3.9e-154 548.1 282 100.0
C09p25520 Brassica napus HOM05D001070 ORTHO05D010233 3.9e-154 548.1 282 100.0
BraSC59t46556Z Brassica rapa HOM05D001070 ORTHO05D005132 1.9e-153 545.8 282 99.6
BcaC04g20701 Brassica carinata HOM05D001070 ORTHO05D002096 2.6e-142 508.8 282 92.2
BolSC35t60710H Brassica oleracea HOM05D001070 ORTHO05D002096 3.7e-80 302.4 159 95.6
PGR111G0057 Punica granatum HOM05D001070 ORTHO05D002096 1.0e-61 241.1 285 51.2
Sc25g0002030 Simmondsia chinensis HOM05D001070 ORTHO05D002096 5.8e-57 225.3 300 47.7
TAR633G1337 Trochodendron aralioides HOM05D001070 ORTHO05D002096 2.9e-56 223.0 303 46.2
Nn304s46233 Nelumbo nucifera HOM05D001070 ORTHO05D002096 4.1e-55 219.2 319 46.1
Ciclev10027640m.g Citrus clementina HOM05D001070 ORTHO05D002096 9.5e-52 208.0 282 45.0
Lalb_Chr07g0191841 Lupinus albus HOM05D001070 ORTHO05D002096 4.6e-46 189.1 318 41.2
PSO548G0067 Papaver somniferum HOM05D001070 ORTHO05D002096 7.8e-46 188.3 283 42.4
Migut.D01246 Erythranthe guttata HOM05D001070 ORTHO05D010233 1.3e-45 187.6 304 41.1
PSO210G1984 Papaver somniferum HOM05D001070 ORTHO05D002096 1.3e-45 187.6 283 42.0
DCAR_032544 Daucus carota HOM05D001070 ORTHO05D002096 1.9e-44 183.7 302 41.1
Solyc00g500088.1 Solanum lycopersicum HOM05D001070 ORTHO05D010233 3.3e-44 183.0 304 39.8
Solyc00g500191.1 Solanum lycopersicum HOM05D001070 ORTHO05D010233 3.3e-44 183.0 304 39.8
Solyc00g500324.1 Solanum lycopersicum HOM05D001070 ORTHO05D010233 3.3e-44 183.0 304 39.8
SalBow1G2240 Salvia bowleyana HOM05D001070 ORTHO05D005132 6.2e-43 178.7 302 39.7
C07p33490 Brassica napus HOM05D001070 ORTHO05D002096 1.1e-42 177.9 90 98.9
Ciclev10014004m.g Citrus clementina HOM05D001070 ORTHO05D010233 4.4e-41 172.6 214 46.7
FAN09G0308 Fragaria x ananassa HOM05D001070 ORTHO05D010233 2.4e-39 166.8 277 39.0
GSVIVG01029582001 Vitis vinifera HOM05D001070 ORTHO05D010233 6.6e-37 158.7 282 40.8
Nitab4.5_0004137g0040 Nicotiana tabacum HOM05D001070 ORTHO05D010233 2.1e-30 137.1 282 35.8
HanXRQChr02g0059751 Helianthus annuus HOM05D001070 ORTHO05D005132 2.7e-30 136.7 293 38.6
HanXRQChr15g0465401 Helianthus annuus HOM05D001070 ORTHO05D002096 2.7e-30 136.7 293 38.6
HanXRQChr17g0569701 Helianthus annuus HOM05D001070 ORTHO05D005132 2.7e-30 136.7 293 38.6
HanXRQCPg0580321 Helianthus annuus HOM05D001070 ORTHO05D005132 2.7e-30 136.7 293 38.6
ClCG11G009260 Citrullus lanatus HOM05D001070 ORTHO05D010233 6.6e-29 132.1 188 43.6
Medtr4g006080 Medicago truncatula HOM05D001070 ORTHO05D002096 6.9e-26 122.1 334 33.5
Gorai.008G099100 Gossypium raimondii HOM05D001070 ORTHO05D010233 1.2e-25 121.3 135 48.9
HanXRQChr15g0465501 Helianthus annuus HOM05D001070 ORTHO05D010233 4.5e-25 119.4 236 39.0
PSO210G2726 Papaver somniferum HOM05D001070 ORTHO05D010233 1.7e-24 117.5 174 44.3
PSO357G0427 Papaver somniferum HOM05D001070 ORTHO05D010233 6.4e-24 115.5 174 45.4
QL93p0141_0004 Quercus lobata HOM05D001070 ORTHO05D010233 1.6e-22 110.9 99 59.6
Solyc00g500043.1 Solanum lycopersicum HOM05D001070 ORTHO05D002096 3.5e-22 109.8 141 44.0
Solyc00g500126.1 Solanum lycopersicum HOM05D001070 ORTHO05D002096 3.5e-22 109.8 141 44.0
Solyc00g500278.1 Solanum lycopersicum HOM05D001070 ORTHO05D002096 3.5e-22 109.8 141 44.0
Peaxi162Scf01305g00039 Petunia axillaris HOM05D001070 ORTHO05D010233 5.1e-21 105.9 196 36.7
Gohir.A05G323700 Gossypium hirsutum HOM05D001070 ORTHO05D002096 6.7e-21 105.5 86 60.5
Gorai.010G119900 Gossypium raimondii HOM05D001070 ORTHO05D010233 3.3e-20 103.2 96 57.3
HanXRQChr00c0703g0576891 Helianthus annuus HOM05D001070 ORTHO05D002096 4.3e-20 102.8 143 45.5
HanXRQChr08g0222861 Helianthus annuus HOM05D001070 ORTHO05D002096 7.4e-20 102.1 139 46.0
Solyc11g021300.2 Solanum lycopersicum HOM05D001070 ORTHO05D010233 2.1e-19 100.5 141 41.8
Solyc05g016220.1 Solanum lycopersicum HOM05D001070 ORTHO05D002096 2.4e-18 97.1 128 40.6
Duzib256G0005 Durio zibethinus HOM05D001070 ORTHO05D002096 6.9e-18 95.5 518 25.5
Gohir.D12G091540 Gossypium hirsutum HOM05D001070 ORTHO05D010233 6.9e-18 95.5 94 54.3
Solyc08g016000.2 Solanum lycopersicum HOM05D001070 ORTHO05D002096 1.7e-16 90.9 99 46.5
Gorai.006G095000 Gossypium raimondii HOM05D001070 ORTHO05D010233 3.2e-15 86.7 102 49.0
EL10Ac5g11665 Beta vulgaris HOM05D001070 ORTHO05D002096 7.1e-15 85.5 91 50.5
EL10Ac7g17376 Beta vulgaris HOM05D001070 ORTHO05D002096 7.1e-15 85.5 91 50.5
TPR.G31143 Trifolium pratense HOM05D001070 ORTHO05D010233 9.3e-15 85.1 241 31.1
HanXRQChr00c0336g0573721 Helianthus annuus HOM05D001070 ORTHO05D010233 1.6e-14 84.3 218 35.8
HanXRQChr17g0557721 Helianthus annuus HOM05D001070 ORTHO05D002096 2.7e-14 83.6 92 51.1
TAR365G0787 Trochodendron aralioides HOM05D001070 ORTHO05D002096 4.6e-14 82.8 80 52.5
Oeu012762.2 Olea europaea HOM05D001070 ORTHO05D002096 3.9e-13 79.7 81 49.4
Gohir.D01G134260 Gossypium hirsutum HOM05D001070 ORTHO05D010233 5.1e-13 79.3 72 58.3
Lju5009P0T37 Lonicera japonica HOM05D001070 ORTHO05D002096 8.7e-13 78.6 156 35.3
ScUNg0000260 Simmondsia chinensis HOM05D001070 ORTHO05D002096 5.7e-12 75.9 74 59.5
CsaV3_1G025500 Cucumis sativus L. HOM05D001070 ORTHO05D010233 2.1e-11 73.9 98 45.9
Lsat_1_v5_gn_0_20081 Lactuca sativa HOM05D001070 ORTHO05D010233 6.3e-11 72.4 222 31.5
HanXRQChr00c0379g0574341 Helianthus annuus HOM05D001070 ORTHO05D002096 8.2e-11 72.0 83 49.4
Sed0027483 Sechium edule HOM05D001070 ORTHO05D010233 8.2e-11 72.0 79 53.2
Gohir.A04G053000 Gossypium hirsutum HOM05D001070 ORTHO05D002096 2.4e-10 70.5 67 53.7
Nitab4.5_0004841g0070 Nicotiana tabacum HOM05D001070 ORTHO05D022991 1.2e-09 68.2 81 50.6
Peaxi162Scf00080g00515 Petunia axillaris HOM05D001070 ORTHO05D010233 1.5e-09 67.8 110 38.2
HPP92_028416 Vanilla planifolia HOM05D041394 ORTHO05D002096 1.5e-09 67.8 225 29.8
Nitab4.5_0000172g2280 Nicotiana tabacum HOM05D001070 ORTHO05D010233 2.6e-09 67.0 192 27.6
Oeu012820.1 Olea europaea HOM05D000533 ORTHO05D002807 1.7e-08 64.3 162 34.0
Solyc02g011850.3 Solanum lycopersicum HOM05D001070 ORTHO05D010233 5.5e-07 59.3 158 30.4
Gorai.012G102000 Gossypium raimondii HOM05D001070 ORTHO05D010233 9.3e-07 58.5 40 75.0
ClCG02G009780 Citrullus lanatus HOM05D000445 ORTHO05D010658 1.6e-06 57.8 56 55.4
Glyma.02G177300 Glycine max HOM05D001070 ORTHO05D010233 3.5e-06 56.6 70 47.1


User provided reference genes

Program Settings