Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C02p28730 Brassica napus HOM05D008016 ORTHO05D010588 1.5e-24 115.2 51 100.0
Nitab4.5_0012234g0020 Nicotiana tabacum HOM05D008016 ORTHO05D010055 4.1e-22 107.1 51 94.1
BNapus_Darmor_BZH_scaffold_69p00020 Brassica napus HOM05D008016 ORTHO05D010588 2.3e-20 101.3 47 95.7
CARHR282370 Cardamine hirsuta HOM05D008016 ORTHO05D010588 2.3e-20 101.3 47 95.7
BolSC29t60497H Brassica oleracea HOM05D008016 ORTHO05D010588 3.0e-20 100.9 46 95.7
BolSC29t60557H Brassica oleracea HOM05D008016 ORTHO05D010588 3.0e-20 100.9 46 95.7
BolSC29t60625H Brassica oleracea HOM05D008016 ORTHO05D010588 3.0e-20 100.9 46 95.7
BolSC35t60682H Brassica oleracea HOM05D008016 ORTHO05D010588 3.0e-20 100.9 46 95.7
BolSC44t60813H Brassica oleracea HOM05D008016 ORTHO05D010588 3.0e-20 100.9 46 95.7
BolSC46t60968H Brassica oleracea HOM05D008016 ORTHO05D010588 3.0e-20 100.9 46 95.7
BraSC103t45418Z Brassica rapa HOM05D008016 ORTHO05D010588 3.0e-20 100.9 46 95.7
BraSC25t45901Z Brassica rapa HOM05D008016 ORTHO05D010588 3.0e-20 100.9 46 95.7
BraSC25t45922Z Brassica rapa HOM05D008016 ORTHO05D010588 3.0e-20 100.9 46 95.7
Nitab4.5_0001249g0070 Nicotiana tabacum HOM05D008016 ORTHO05D010588 1.9e-19 98.2 48 87.5
BolSC45t60920H Brassica oleracea HOM05D008016 ORTHO05D010588 4.3e-19 97.1 44 95.5
Nitab4.5_0004137g0030 Nicotiana tabacum HOM05D008354 ORTHO05D010055 7.3e-19 96.3 51 88.2
Nitab4.5_0005831g0030 Nicotiana tabacum HOM05D001090 ORTHO05D006167 9.5e-19 95.9 44 95.5
CsaV3_UNG196490 Cucumis sativus L. HOM05D008016 ORTHO05D010588 1.2e-18 95.5 47 89.4
Lalb_Chr17g0346961 Lupinus albus HOM05D008016 ORTHO05D010588 5.8e-16 86.7 44 88.6
Lsat_1_v5_gn_2_20521 Lactuca sativa HOM05D001966 ORTHO05D007227 1.3e-15 85.5 40 92.5
Lsat_1_v5_gn_4_147840 Lactuca sativa HOM05D008016 ORTHO05D010588 1.3e-15 85.5 40 92.5
Lsat_1_v5_gn_5_181880 Lactuca sativa HOM05D001966 ORTHO05D007227 1.3e-15 85.5 40 92.5
Nitab4.5_0001727g0120 Nicotiana tabacum HOM05D008016 ORTHO05D010055 1.1e-14 82.4 47 83.0
DCAR_024575 Daucus carota HOM05D008354 ORTHO05D010055 7.1e-14 79.7 37 89.2
BolSC49t61132H Brassica oleracea HOM05D001966 ORTHO05D010986 3.5e-13 77.4 36 97.2
COL.COLO4_03213 Corchorus olitorius HOM05D001966 ORTHO05D010986 1.9e-11 71.6 41 80.5
Sed0021589 Sechium edule HOM05D008016 ORTHO05D004271 5.6e-11 70.1 32 93.8
CAN.G100.35 Capsicum annuum HOM05D008016 ORTHO05D010588 2.1e-10 68.2 34 79.4
BolSC29t60538H Brassica oleracea HOM05D008016 ORTHO05D010986 2.8e-10 67.8 31 93.5
arahy.Tifrunner.gnm1.ann1.JURL6Q Arachis hypogaea HOM05D001966 ORTHO05D007227 8.1e-10 66.2 36 80.6
BcaC05g27379 Brassica carinata HOM05D008016 ORTHO05D021751 2.4e-09 64.7 37 78.4
arahy.Tifrunner.gnm1.ann1.8D90VP Arachis hypogaea HOM05D001966 ORTHO05D007227 3.1e-09 64.3 30 90.0
arahy.Tifrunner.gnm1.ann1.VZYH4A Arachis hypogaea HOM05D008016 ORTHO05D010588 3.1e-09 64.3 30 90.0
arahy.Tifrunner.gnm1.ann1.WI2XKB Arachis hypogaea HOM05D001966 ORTHO05D007227 3.1e-09 64.3 30 90.0
arahy.Tifrunner.gnm1.ann1.ZMH4QB Arachis hypogaea HOM05D001966 ORTHO05D010986 3.1e-09 64.3 30 90.0
arahy.Tifrunner.gnm1.ann1.ZHN7AL Arachis hypogaea HOM05D001966 ORTHO05D007227 4.0e-09 63.9 30 86.7
Sed0000516 Sechium edule HOM05D008037 ORTHO05D004271 9.0e-09 62.8 55 58.2
Sopen02g009090 Solanum pennellii HOM05D008037 ORTHO05D004271 1.5e-08 62.0 30 86.7
Nitab4.5_0007400g0100 Nicotiana tabacum HOM05D008016 ORTHO05D004271 1.3e-07 58.9 30 83.3
Thhalv10029308m.g Eutrema salsugineum HOM05D008354 ORTHO05D010055 1.7e-07 58.5 27 88.9
CAN.G1346.2 Capsicum annuum HOM05D001966 ORTHO05D010588 3.8e-07 57.4 26 96.2
C09p24670 Brassica napus HOM05D001966 ORTHO05D007227 3.2e-06 54.3 36 69.4
C09p39340 Brassica napus HOM05D001966 ORTHO05D007227 3.2e-06 54.3 36 69.4


User provided reference genes

Program Settings