Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C02p28550 Brassica napus HOM05D006103 ORTHO05D007468 1.7e-169 599.4 327 100.0
BolC2t08897H Brassica oleracea HOM05D006103 ORTHO05D007468 1.7e-169 599.4 327 100.0
BcaC03g15262 Brassica carinata HOM05D006103 ORTHO05D007468 4.1e-147 525.0 298 98.0
C02p48360 Brassica napus HOM05D006103 ORTHO05D007468 7.0e-147 524.2 328 89.9
BolC2t10867H Brassica oleracea HOM05D006103 ORTHO05D007468 7.0e-147 524.2 328 89.9
BcaC03g16934 Brassica carinata HOM05D006103 ORTHO05D007468 2.2e-140 502.7 301 92.7
A02p30800 Brassica napus HOM05D006103 ORTHO05D007468 4.1e-139 498.4 296 93.9
BraA02t08094Z Brassica rapa HOM05D006103 ORTHO05D007468 2.0e-138 496.1 296 93.6
Carub.0008s0066 Capsella rubella HOM05D006103 ORTHO05D007468 1.2e-125 453.8 310 81.9
AL8G11110 Arabidopsis lyrata HOM05D006103 ORTHO05D007468 3.7e-124 448.7 315 80.0
Sp2g11900 Schrenkiella parvula HOM05D006103 ORTHO05D007468 1.4e-123 446.8 317 80.4
BcaC07g39778 Brassica carinata HOM05D006103 ORTHO05D007468 4.1e-123 445.3 296 88.5
Thhalv10000969m.g Eutrema salsugineum HOM05D006103 ORTHO05D007468 3.5e-122 442.2 312 80.4
CARHR174300 Cardamine hirsuta HOM05D006103 ORTHO05D007468 1.7e-121 439.9 294 82.7
AT5G47090 Arabidopsis thaliana HOM05D006103 ORTHO05D007468 4.0e-118 428.7 303 79.9
Aa31LG9G5870 Aethionema arabicum HOM05D006103 ORTHO05D007468 3.2e-107 392.5 364 66.5
Atru.chr9.1156 Acer truncatum HOM05D006103 ORTHO05D007468 3.6e-95 352.4 309 67.0
TWI60G1123 Tripterygium wilfordii HOM05D006103 ORTHO05D007468 3.1e-94 349.4 300 66.0
Potri.001G149800 Populus trichocarpa HOM05D006103 ORTHO05D007468 1.5e-93 347.1 303 65.3
Sabra01G0119800 Salix brachista HOM05D006103 ORTHO05D007468 1.5e-93 347.1 318 63.8
Ciclev10021261m.g Citrus clementina HOM05D006103 ORTHO05D007468 3.4e-93 345.9 315 63.8
Duzib205G0801 Durio zibethinus HOM05D006103 ORTHO05D007468 2.9e-92 342.8 309 67.6
TAR375G0262 Trochodendron aralioides HOM05D006103 ORTHO05D007468 3.8e-92 342.4 312 63.8
Dinv25153 Davidia involucrata HOM05D006103 ORTHO05D007468 5.4e-91 338.6 321 61.7
Cpa.g.sc98.70 Carica papaya HOM05D006103 ORTHO05D007468 1.2e-90 337.4 323 56.7
Manes.17G024600 Manihot esculenta HOM05D006103 ORTHO05D007468 1.2e-90 337.4 326 61.7
CSS0027189 Camellia sinensis var. sinensis HOM05D006103 ORTHO05D007468 6.0e-90 335.1 304 63.2
arahy.Tifrunner.gnm1.ann1.GKQN4T Arachis hypogaea HOM05D006103 ORTHO05D007468 1.7e-89 333.6 336 60.1
Thecc.03G237900 Theobroma cacao HOM05D006103 ORTHO05D007468 2.3e-89 333.2 316 63.6
Gohir.D08G182200 Gossypium hirsutum HOM05D006103 ORTHO05D007468 1.1e-88 330.9 315 63.5
Gorai.004G191100 Gossypium raimondii HOM05D006103 ORTHO05D007468 1.1e-88 330.9 315 63.5
Glyma.05G067000 Glycine max HOM05D006103 ORTHO05D007468 1.9e-88 330.1 315 61.6
PGR042G3635 Punica granatum HOM05D006103 ORTHO05D007468 1.9e-88 330.1 312 59.0
CSS0016826 Camellia sinensis var. sinensis HOM05D006103 ORTHO05D007468 2.5e-88 329.7 323 53.9
RcHm_v2.0_Chr7g0206421 Rosa chinensis HOM05D006103 ORTHO05D007468 2.5e-88 329.7 334 54.2
FAN04G1103 Fragaria x ananassa HOM05D006103 ORTHO05D007468 7.3e-88 328.2 322 54.3
Oeu054287.1 Olea europaea HOM05D006103 ORTHO05D007468 7.3e-88 328.2 323 57.6
Cc08_g11160 Coffea canephora HOM05D006103 ORTHO05D007468 9.6e-88 327.8 313 60.1
Eucgr.E00334 Eucalyptus grandis HOM05D006103 ORTHO05D007468 1.3e-87 327.4 339 60.2
Prupe.5G053300 Prunus persica HOM05D006103 ORTHO05D007468 1.3e-87 327.4 330 60.0
Lalb_Chr16g0386381 Lupinus albus HOM05D006103 ORTHO05D007468 2.1e-87 326.6 319 59.6
FvH4_5g20690 Fragaria vesca HOM05D006103 ORTHO05D007468 4.8e-87 325.5 331 59.2
FAN18G2558 Fragaria x ananassa HOM05D006103 ORTHO05D007468 6.2e-87 325.1 332 59.0
FAN08G0488 Fragaria x ananassa HOM05D006103 ORTHO05D007468 1.1e-86 324.3 325 59.7
Lj8C280G0 Lonicera japonica HOM05D006103 ORTHO05D007468 2.4e-86 323.2 309 54.4
Gohir.A08G162200 Gossypium hirsutum HOM05D006103 ORTHO05D007468 9.0e-86 321.2 315 62.2
Haze_08348 Corylus avellana HOM05D006103 ORTHO05D007468 1.2e-85 320.9 318 60.1
VMungo0251G0880 Vigna mungo HOM05D006103 ORTHO05D007468 1.2e-85 320.9 316 60.8
CANSAT21G0053 Cannabis sativa HOM05D006103 ORTHO05D007468 1.5e-85 320.5 307 62.2
FAN13G0941 Fragaria x ananassa HOM05D006103 ORTHO05D007468 2.6e-85 319.7 325 52.6
Lj8A286T53 Lonicera japonica HOM05D006103 ORTHO05D007468 2.6e-85 319.7 326 58.3
Ca_22022_v3 Cicer arietinum L. HOM05D006103 ORTHO05D007468 1.3e-84 317.4 298 59.4
MD04G1054200 Malus domestica HOM05D006103 ORTHO05D007468 1.7e-84 317.0 344 56.7
CiPaw.11G084400 Carya illinoinensis HOM05D006103 ORTHO05D007468 6.4e-84 315.1 322 53.7
ClCG10G002100 Citrullus lanatus HOM05D006103 ORTHO05D007468 1.1e-83 314.3 322 58.7
MBI04_g46823_MAGBIO Magnolia biondii HOM05D006103 ORTHO05D007468 1.4e-83 313.9 302 58.3
Lj4g0004061 Lotus japonicus HOM05D006103 ORTHO05D007468 2.4e-83 313.2 329 56.2
QL12p008443 Quercus lobata HOM05D006103 ORTHO05D007468 2.4e-83 313.2 306 60.8
MSTRG.13771 Avicennia marina HOM05D006103 ORTHO05D007468 4.2e-83 312.4 313 57.2
Actinidia03414 Actinidia chinensis HOM05D006103 ORTHO05D007468 5.4e-83 312.0 319 57.4
Phvul.003G226000 Phaseolus vulgaris HOM05D006103 ORTHO05D007468 9.3e-83 311.2 320 58.1
SGA_v2.0_scaffold20G09256 Striga asiatica HOM05D006103 ORTHO05D007468 1.2e-82 310.8 313 55.0
Sed0003222 Sechium edule HOM05D006103 ORTHO05D007468 1.6e-82 310.5 323 60.4
Nitab4.5_0000506g0180 Nicotiana tabacum HOM05D006103 ORTHO05D007468 1.0e-81 307.8 323 56.0
AUR62007192 Chenopodium quinoa HOM05D006103 ORTHO05D007468 1.3e-81 307.4 301 54.8
Aqoxy3G02600 Aquilegia oxysepala HOM05D006103 ORTHO05D007468 3.0e-81 306.2 308 59.4
CsaV3_3G002190 Cucumis sativus L. HOM05D006103 ORTHO05D007468 3.0e-81 306.2 329 52.9
CAN.G422.12 Capsicum annuum HOM05D006103 ORTHO05D007468 5.1e-81 305.4 317 58.7
Lsat_1_v5_gn_6_94780 Lactuca sativa HOM05D006103 ORTHO05D007468 6.6e-81 305.1 302 60.3
PSO063G5173 Papaver somniferum HOM05D006103 ORTHO05D007468 1.5e-80 303.9 334 55.7
DCAR_004514 Daucus carota HOM05D006103 ORTHO05D007468 1.9e-80 303.5 339 55.2
Solyc06g060990.4 Solanum lycopersicum HOM05D006103 ORTHO05D007468 1.9e-80 303.5 323 57.3
Sopen06g021130 Solanum pennellii HOM05D006103 ORTHO05D007468 1.9e-80 303.5 322 57.5
MELO3C013891.2 Cucumis melo HOM05D006103 ORTHO05D007468 2.5e-80 303.1 336 53.6
HanXRQChr03g0089621 Helianthus annuus HOM05D006103 ORTHO05D007468 2.5e-80 303.1 288 61.5
BolC8t50609H Brassica oleracea HOM05D006103 ORTHO05D007468 9.6e-80 301.2 166 93.4
unitig_699.g19773 Utricularia gibba HOM05D006103 ORTHO05D007468 3.6e-79 299.3 331 50.8
PGSC0003DMG400026583 Solanum tuberosum HOM05D006103 ORTHO05D007468 6.2e-79 298.5 322 57.1
CDE02G1890 Ceratophyllum demersum HOM05D006103 ORTHO05D007468 3.4e-77 292.7 303 53.8
Medtr4g099190 Medicago truncatula HOM05D006103 ORTHO05D007468 1.3e-76 290.8 327 52.9
SHI07660 Sapria himalayana HOM05D006103 ORTHO05D007468 1.4e-75 287.3 295 55.3
Hund11307 Selenicereus undatus HOM05D006103 ORTHO05D007468 1.9e-75 287.0 262 61.8
EL10Ac5g12236 Beta vulgaris HOM05D006103 ORTHO05D007468 4.2e-75 285.8 333 48.3
Migut.E01036 Erythranthe guttata HOM05D006103 ORTHO05D007468 9.3e-75 284.6 288 54.2
Migut.E01310 Erythranthe guttata HOM05D006103 ORTHO05D007468 9.3e-75 284.6 288 54.2
vmacro00388 Vaccinium macrocarpon HOM05D006103 ORTHO05D007468 5.1e-73 278.9 402 41.8
C08p30000 Brassica napus HOM05D006103 ORTHO05D007468 3.7e-71 272.7 145 95.9
Zm00001eb377550 Zea mays HOM05D006103 ORTHO05D007468 1.8e-70 270.4 324 49.7
ECA240G1687 Erigeron canadensis HOM05D005140 ORTHO05D006288 2.4e-70 270.0 271 56.5
Os06g0139700 Oryza sativa ssp. japonica HOM05D006103 ORTHO05D007468 3.1e-70 269.6 317 55.5
GSVIVG01013285001 Vitis vinifera HOM05D006103 ORTHO05D007468 1.2e-69 267.7 198 68.7
Psat4g074520 Pisum sativum HOM05D006103 ORTHO05D007468 1.1e-67 261.2 293 50.5
Sc22g0001160 Simmondsia chinensis HOM05D006103 ORTHO05D007468 1.9e-67 260.4 199 65.3
CDE11G0859 Ceratophyllum demersum HOM05D006103 ORTHO05D007468 4.6e-66 255.8 249 58.2
ATR0665G401 Amborella trichopoda HOM05D006103 ORTHO05D007468 7.9e-66 255.0 298 53.0
Dinv28889 Davidia involucrata HOM05D006103 ORTHO05D007468 1.0e-65 254.6 198 64.1
SEGI_16450 Sequoiadendron giganteum HOM05D006103 ORTHO05D007468 1.8e-65 253.8 319 48.9
Peaxi162Scf00190g00616 Petunia axillaris HOM05D006103 ORTHO05D007468 2.3e-65 253.4 266 60.5
CANSAT21G0160 Cannabis sativa HOM05D001479 ORTHO05D007468 3.3e-64 249.6 187 66.3
CANSAT21G1035 Cannabis sativa HOM05D006103 ORTHO05D007468 3.3e-64 249.6 187 66.3
Rhsim04G0176100 Rhododendron simsii HOM05D006103 ORTHO05D007468 4.3e-64 249.2 259 57.5
TPR.G25737 Trifolium pratense HOM05D006103 ORTHO05D007468 2.6e-61 240.0 342 46.5
Nitab4.5_0013289g0030 Nicotiana tabacum HOM05D006103 ORTHO05D007468 9.7e-56 221.5 238 59.2
HPP92_014398 Vanilla planifolia HOM05D006103 ORTHO05D007468 8.2e-55 218.4 192 54.7
Pp3c16_2730 Physcomitrium patens HOM05D006103 ORTHO05D007468 5.3e-54 215.7 339 40.4
Hma1.2p1_1672F.1_g296810 Hydrangea macrophylla HOM05D006103 ORTHO05D007468 1.6e-50 204.1 213 51.2
AUR62018811 Chenopodium quinoa HOM05D006103 ORTHO05D007468 6.7e-49 198.7 186 57.0
SMO171G0121 Selaginella moellendorffii HOM05D006103 ORTHO05D007468 8.2e-47 191.8 314 38.2
AagrBONN_evm.TU.Sc2ySwM_368.2081 Anthoceros agrestis HOM05D006103 ORTHO05D007468 4.1e-46 189.5 314 39.8
AL8G11000 Arabidopsis lyrata HOM05D006103 ORTHO05D007468 1.6e-42 177.6 151 75.5
Lj8A284T15 Lonicera japonica HOM05D006103 ORTHO05D007468 2.8e-39 166.8 154 53.2
CBR_g49667 Chara braunii HOM05D006103 ORTHO05D007468 5.3e-38 162.5 413 28.8
SHI06573 Sapria himalayana HOM05D006103 ORTHO05D007468 3.4e-24 116.7 120 51.7
MCO11G792 Micromonas commoda HOM05D006103 ORTHO05D007468 1.6e-21 107.8 357 26.6
RcHm_v2.0_Chr4g0446321 Rosa chinensis HOM05D006103 ORTHO05D007468 2.9e-20 103.6 171 39.8
Actinidia02205 Actinidia chinensis HOM05D006103 ORTHO05D007468 8.5e-20 102.1 77 64.9
Cfa012348 Carpinus fangiana HOM05D006103 ORTHO05D007468 2.3e-17 94.0 70 64.3
Carub.0008s0069 Capsella rubella HOM05D006103 ORTHO05D007468 3.0e-17 93.6 84 65.5
SHI06574 Sapria himalayana HOM05D006103 ORTHO05D007468 6.8e-17 92.4 130 41.5
Lj8A284T12 Lonicera japonica HOM05D006103 ORTHO05D007468 2.6e-16 90.5 133 42.9
COL.COLO4_06694 Corchorus olitorius HOM05D006103 ORTHO05D007468 1.7e-15 87.8 53 79.2
Lj8C284T4 Lonicera japonica HOM05D006103 ORTHO05D007468 1.4e-14 84.7 55 63.6
CARHR174410 Cardamine hirsuta HOM05D006103 ORTHO05D007468 7.0e-14 82.4 50 76.0
RcHm_v2.0_Chr6g0308851 Rosa chinensis HOM05D006103 ORTHO05D007468 7.7e-13 79.0 54 72.2
Cre03.g170100 Chlamydomonas reinhardtii HOM05D006103 ORTHO05D007468 8.6e-12 75.5 138 36.2
Lj8A280T20 Lonicera japonica HOM05D006103 ORTHO05D007468 3.4e-08 63.5 40 80.0
Actinidia25920 Actinidia chinensis HOM05D006103 ORTHO05D007468 1.3e-07 61.6 84 40.5
Rhsim04G0176300 Rhododendron simsii HOM05D006103 ORTHO05D007468 6.4e-07 59.3 64 50.0


User provided reference genes

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