Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C02p28490 Brassica napus HOM05D009085 ORTHO05D010299 1.1e-99 367.1 250 100.0
BolC2t08890H Brassica oleracea HOM05D009085 ORTHO05D010299 1.1e-99 367.1 250 100.0
BcaB05g24633 Brassica carinata HOM05D009085 ORTHO05D010299 1.2e-34 151.0 125 84.8
BcaB05g24626 Brassica carinata HOM05D007874 ORTHO05D009614 5.3e-30 135.6 120 81.7
A07p37390 Brassica napus HOM05D009085 ORTHO05D010299 1.2e-29 134.4 127 74.0
BraA07t31297Z Brassica rapa HOM05D009085 ORTHO05D010299 1.2e-29 134.4 127 74.0
C06p45080 Brassica napus HOM05D009085 ORTHO05D010299 2.0e-29 133.7 127 73.2
BolC6t39566H Brassica oleracea HOM05D009085 ORTHO05D010299 2.0e-29 133.7 127 73.2
BcaC08g46544 Brassica carinata HOM05D009085 ORTHO05D010299 2.6e-29 133.3 127 73.2
BcaB03g14860 Brassica carinata HOM05D009085 ORTHO05D010299 5.5e-27 125.6 127 75.6
Sp5g26130 Schrenkiella parvula HOM05D007874 ORTHO05D009614 1.8e-25 120.6 118 78.0
Carub.0002s1778 Capsella rubella HOM05D009085 ORTHO05D010299 2.3e-25 120.2 132 68.9
AL2G30530 Arabidopsis lyrata HOM05D007874 ORTHO05D009614 3.0e-25 119.8 118 72.9
AT1G70990 Arabidopsis thaliana HOM05D009085 ORTHO05D010299 4.0e-25 119.4 131 65.6
BcaB03g14859 Brassica carinata HOM05D007874 ORTHO05D009614 4.0e-25 119.4 127 72.4
AL2G30540 Arabidopsis lyrata HOM05D009085 ORTHO05D010299 6.7e-25 118.6 128 68.0
Thhalv10019710m.g Eutrema salsugineum HOM05D009085 ORTHO05D010299 4.4e-24 115.9 130 70.8
CARHR064260 Cardamine hirsuta HOM05D007874 ORTHO05D009614 9.7e-24 114.8 118 58.5
AT1G70985 Arabidopsis thaliana HOM05D007874 ORTHO05D009614 1.7e-23 114.0 115 65.2
Thhalv10019301m.g Eutrema salsugineum HOM05D007874 ORTHO05D009614 2.4e-22 110.2 123 68.3
CARHR064270 Cardamine hirsuta HOM05D009085 ORTHO05D010299 3.8e-20 102.8 125 60.8
Aa31LG4G10100 Aethionema arabicum HOM05D007874 ORTHO05D009614 3.1e-14 83.2 101 54.5
A09p41670 Brassica napus HOM05D007874 ORTHO05D009614 5.4e-14 82.4 139 48.2
BraA09t39656Z Brassica rapa HOM05D007874 ORTHO05D009614 5.4e-14 82.4 139 48.2
Cpa.g.sc65.135 Carica papaya HOM05D007874 ORTHO05D009614 9.1e-14 81.6 142 39.4
Carub.0001s2256 Capsella rubella HOM05D009085 ORTHO05D010299 1.2e-13 81.3 136 54.4
Sp5g26140 Schrenkiella parvula HOM05D009085 ORTHO05D010299 2.0e-13 80.5 42 88.1
BcaB07g32301 Brassica carinata HOM05D009085 ORTHO05D010299 2.7e-13 80.1 140 52.1
AL1G36610 Arabidopsis lyrata HOM05D009085 ORTHO05D010299 3.5e-13 79.7 140 55.7
BcaC06g35011 Brassica carinata HOM05D009085 ORTHO05D010299 3.5e-13 79.7 130 56.9
C07p20740 Brassica napus HOM05D009085 ORTHO05D010299 3.5e-13 79.7 130 56.9
BolC7t42605H Brassica oleracea HOM05D009085 ORTHO05D010299 3.5e-13 79.7 130 56.9
AT1G23040 Arabidopsis thaliana HOM05D009085 ORTHO05D010299 5.9e-13 79.0 139 56.1
Sp1g20490 Schrenkiella parvula HOM05D009085 ORTHO05D010299 1.3e-12 77.8 140 50.7
BraA09t39657Z Brassica rapa HOM05D009085 ORTHO05D010299 1.7e-12 77.4 139 52.5
BcaC05g26216 Brassica carinata HOM05D007874 ORTHO05D009614 2.9e-12 76.6 146 47.3
C05p22280 Brassica napus HOM05D007874 ORTHO05D009614 2.9e-12 76.6 146 47.3
BolC5t30927H Brassica oleracea HOM05D007874 ORTHO05D009614 2.9e-12 76.6 146 47.3
Ciclev10017051m.g Citrus clementina HOM05D007874 ORTHO05D009614 3.8e-12 76.3 138 34.1
BcaB03g14172 Brassica carinata HOM05D009085 ORTHO05D010299 5.0e-12 75.9 132 50.8
A09p41680 Brassica napus HOM05D009085 ORTHO05D010299 5.0e-12 75.9 139 50.4
Potri.008G129200 Populus trichocarpa HOM05D007874 ORTHO05D009614 5.0e-12 75.9 123 37.4
BcaC05g26215 Brassica carinata HOM05D009085 ORTHO05D010299 6.5e-12 75.5 130 50.8
C05p22250 Brassica napus HOM05D009085 ORTHO05D010299 6.5e-12 75.5 130 50.8
BraA07t29166Z Brassica rapa HOM05D009085 ORTHO05D010299 6.5e-12 75.5 133 51.9
BcaB03g14857 Brassica carinata HOM05D007874 ORTHO05D009614 8.6e-12 75.1 128 59.4
BolC6t39564H Brassica oleracea HOM05D007874 ORTHO05D009614 8.6e-12 75.1 128 59.4
THA.LOC104809191 Tarenaya hassleriana HOM05D007874 ORTHO05D009614 8.6e-12 75.1 114 52.6
A07p14080 Brassica napus HOM05D009085 ORTHO05D010299 1.1e-11 74.7 133 51.1
Manes.15G127500 Manihot esculenta HOM05D007874 ORTHO05D009614 1.5e-11 74.3 121 47.1
BraA07t31296Z Brassica rapa HOM05D007874 ORTHO05D009614 1.9e-11 73.9 127 59.1
BolC5t30925H Brassica oleracea HOM05D009085 ORTHO05D010299 5.5e-11 72.4 130 50.0
Duzib251G0922 Durio zibethinus HOM05D007874 ORTHO05D009614 7.2e-11 72.0 135 42.2
Thecc.02G281500 Theobroma cacao HOM05D007874 ORTHO05D009614 1.2e-10 71.2 121 41.3
Aa31LG4G10070 Aethionema arabicum HOM05D009085 ORTHO05D010299 2.1e-10 70.5 101 66.3
THA.LOC104823013 Tarenaya hassleriana HOM05D009085 ORTHO05D010299 2.1e-10 70.5 92 64.1
AT1G23050 Arabidopsis thaliana HOM05D007874 ORTHO05D009614 2.8e-10 70.1 128 53.1
CARHR023420 Cardamine hirsuta HOM05D009085 ORTHO05D010299 4.7e-10 69.3 124 58.9
A07p37380 Brassica napus HOM05D007874 ORTHO05D009614 6.1e-10 68.9 127 57.5
CARHR001730 Cardamine hirsuta HOM05D013133 ORTHO05D015352 8.0e-10 68.6 143 46.9
Manes.17G076900 Manihot esculenta HOM05D007874 ORTHO05D009614 4.0e-09 66.2 122 43.4
C06p45060 Brassica napus HOM05D007874 ORTHO05D009614 6.8e-09 65.5 127 56.7
Sabra08G0097900 Salix brachista HOM05D007874 ORTHO05D009614 3.4e-08 63.2 122 35.2
Sabra10G0083200 Salix brachista HOM05D007874 ORTHO05D009614 3.4e-08 63.2 91 42.9
Aa31LG7G7040 Aethionema arabicum HOM05D009085 ORTHO05D010299 4.4e-08 62.8 132 47.0
Carub.0001s0148 Capsella rubella HOM05D013133 ORTHO05D015352 7.5e-08 62.0 136 52.9
DCAR_026776 Daucus carota HOM05D007874 ORTHO05D009614 7.5e-08 62.0 112 41.1
Gorai.002G179200 Gossypium raimondii HOM05D007874 ORTHO05D009614 7.5e-08 62.0 120 47.5
Carub.0002s1776 Capsella rubella HOM05D007874 ORTHO05D009614 2.2e-07 60.5 114 56.1
Glyma.07G216900 Glycine max HOM05D017162 ORTHO05D009614 2.8e-07 60.1 119 51.3
Sp1g01490 Schrenkiella parvula HOM05D013133 ORTHO05D015352 3.7e-07 59.7 131 51.9
Sp1g20500 Schrenkiella parvula HOM05D007874 ORTHO05D009614 3.7e-07 59.7 134 53.0
Potri.010G113100 Populus trichocarpa HOM05D007874 ORTHO05D009614 4.9e-07 59.3 106 64.2
CiPaw.05G249700 Carya illinoinensis HOM05D007874 ORTHO05D009614 1.4e-06 57.8 152 30.3
CANSAT01G3222 Cannabis sativa HOM05D007874 ORTHO05D009614 1.8e-06 57.4 115 31.3
Hma1.2p1_0096F.1_g047930 Hydrangea macrophylla HOM05D007874 ORTHO05D009614 1.8e-06 57.4 114 44.7
Eucgr.B02901 Eucalyptus grandis HOM05D007874 ORTHO05D009614 2.4e-06 57.0 114 56.1
Psat7g128240 Pisum sativum HOM05D007874 ORTHO05D009614 3.1e-06 56.6 116 44.0
MSTRG.901 Avicennia marina HOM05D007874 ORTHO05D009614 5.4e-06 55.8 114 43.9
Cc11_g08720 Coffea canephora HOM05D007874 ORTHO05D009614 5.4e-06 55.8 110 49.1
RcHm_v2.0_Chr4g0441281 Rosa chinensis HOM05D020194 ORTHO05D009614 5.4e-06 55.8 120 50.0
Carub.0001s2257 Capsella rubella HOM05D007874 ORTHO05D009614 7.0e-06 55.5 126 38.9


User provided reference genes

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