Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C02p27590 Brassica napus HOM05D007293 ORTHO05D009143 1.3e-46 189.5 106 100.0
BolC2t08814H Brassica oleracea HOM05D007293 ORTHO05D009143 2.3e-43 178.7 106 95.3
BcaC03g15179 Brassica carinata HOM05D007293 ORTHO05D009143 4.0e-43 177.9 103 97.1
A02p16490 Brassica napus HOM05D007293 ORTHO05D009143 8.8e-43 176.8 106 94.3
BraA02t06707Z Brassica rapa HOM05D007293 ORTHO05D009143 8.8e-43 176.8 106 94.3
Sp5g25470 Schrenkiella parvula HOM05D007293 ORTHO05D009143 8.9e-35 150.2 106 83.0
BcaB05g24561 Brassica carinata HOM05D007293 ORTHO05D009143 4.6e-31 137.9 107 80.4
Thhalv10019350m.g Eutrema salsugineum HOM05D007293 ORTHO05D009143 1.1e-29 133.3 106 77.4
BcaB03g15542 Brassica carinata HOM05D007293 ORTHO05D009143 1.2e-28 129.8 107 76.6
CARHR063530 Cardamine hirsuta HOM05D007293 ORTHO05D009143 4.7e-28 127.9 106 72.6
AL2G29660 Arabidopsis lyrata HOM05D007293 ORTHO05D009143 8.0e-28 127.1 106 72.6
AT1G70350 Arabidopsis thaliana HOM05D007293 ORTHO05D009143 8.0e-28 127.1 106 72.6
Carub.0002s1704 Capsella rubella HOM05D007293 ORTHO05D009143 8.0e-28 127.1 106 73.6
BcaC08g45820 Brassica carinata HOM05D007293 ORTHO05D009143 1.8e-27 125.9 106 74.5
BolC6t38732H Brassica oleracea HOM05D007293 ORTHO05D009143 2.3e-27 125.6 102 76.5
A07p31100 Brassica napus HOM05D007293 ORTHO05D009143 8.9e-27 123.6 102 75.5
BraA07t30744Z Brassica rapa HOM05D007293 ORTHO05D009143 8.9e-27 123.6 102 75.5
BcaB07g33183 Brassica carinata HOM05D027076 ORTHO05D027107 2.0e-26 122.5 86 82.6
C06p36130 Brassica napus HOM05D007293 ORTHO05D009143 2.6e-26 122.1 102 75.5
THA.LOC104808972 Tarenaya hassleriana HOM05D007293 ORTHO05D009143 2.6e-18 95.5 106 61.3
THA.LOC104822141 Tarenaya hassleriana HOM05D007293 ORTHO05D009143 1.3e-17 93.2 106 61.3
PGR119G0124 Punica granatum HOM05D007293 ORTHO05D009143 1.7e-14 82.8 106 54.7
Atru.chr11.2025 Acer truncatum HOM05D007293 ORTHO05D009143 6.6e-14 80.9 106 51.9
Ciclev10033010m.g Citrus clementina HOM05D007293 ORTHO05D009143 1.5e-13 79.7 103 49.5
Duzib268G1575 Durio zibethinus HOM05D007293 ORTHO05D009143 2.5e-13 79.0 106 54.7
RcHm_v2.0_Chr4g0443851 Rosa chinensis HOM05D007293 ORTHO05D009143 3.3e-13 78.6 106 51.9
Thecc.02G249100 Theobroma cacao HOM05D007293 ORTHO05D009143 1.2e-12 76.6 106 54.7
RcHm_v2.0_Chr4g0443841 Rosa chinensis HOM05D007293 ORTHO05D009143 1.6e-12 76.3 105 51.4
FAN12G1260 Fragaria x ananassa HOM05D007293 ORTHO05D009143 2.1e-12 75.9 104 51.9
FAN17G1887 Fragaria x ananassa HOM05D007293 ORTHO05D009143 6.2e-12 74.3 106 50.0
FAN22G1529 Fragaria x ananassa HOM05D007293 ORTHO05D009143 6.2e-12 74.3 106 50.0
FvH4_4g34460 Fragaria vesca HOM05D007293 ORTHO05D009143 8.1e-12 73.9 104 51.0
Duzib251G0045 Durio zibethinus HOM05D007293 ORTHO05D009143 1.4e-11 73.2 103 52.4
TWI75G0451 Tripterygium wilfordii HOM05D007293 ORTHO05D009143 2.3e-11 72.4 107 51.4
COL.COLO4_36768 Corchorus olitorius HOM05D007293 ORTHO05D009143 5.2e-11 71.2 98 52.0
Prupe.1G253900 Prunus persica HOM05D007293 ORTHO05D009143 5.2e-11 71.2 104 50.0
Gohir.A03G139900 Gossypium hirsutum HOM05D007293 ORTHO05D009143 6.8e-11 70.9 106 51.9
Gohir.D02G162700 Gossypium hirsutum HOM05D007293 ORTHO05D009143 6.8e-11 70.9 106 51.9
ClCG08G018060 Citrullus lanatus HOM05D007293 ORTHO05D009143 8.9e-11 70.5 95 54.7
MD16G1092500 Malus domestica HOM05D007293 ORTHO05D009143 1.2e-10 70.1 104 48.1
AUR62014041 Chenopodium quinoa HOM05D007293 ORTHO05D009143 1.5e-10 69.7 100 51.0
Gorai.005G182700 Gossypium raimondii HOM05D007293 ORTHO05D009143 1.5e-10 69.7 106 50.9
MD13G1091900 Malus domestica HOM05D007293 ORTHO05D009143 2.0e-10 69.3 106 47.2
Manes.13G030700 Manihot esculenta HOM05D007293 ORTHO05D009143 2.6e-10 68.9 111 45.0
TPR.G13591 Trifolium pratense HOM05D007293 ORTHO05D009143 2.6e-10 68.9 107 51.4
EL10Ac6g13673 Beta vulgaris HOM05D007293 ORTHO05D009143 3.4e-10 68.6 81 58.0
CANSAT01G1482 Cannabis sativa HOM05D007293 ORTHO05D009143 3.4e-10 68.6 106 50.9
Glyma.02G034600 Glycine max HOM05D007293 ORTHO05D009143 3.4e-10 68.6 107 46.7
Sc04g0009130 Simmondsia chinensis HOM05D007293 ORTHO05D009143 5.8e-10 67.8 93 48.4
Eucgr.H02610 Eucalyptus grandis HOM05D007293 ORTHO05D009143 2.9e-09 65.5 102 47.1
AUR62005378 Chenopodium quinoa HOM05D007293 ORTHO05D009143 4.9e-09 64.7 99 44.4
Prupe.5G015600 Prunus persica HOM05D007293 ORTHO05D009143 4.9e-09 64.7 98 48.0
Psat2g106240 Pisum sativum HOM05D007293 ORTHO05D009143 6.4e-09 64.3 110 45.5
Dinv33495 Davidia involucrata HOM05D007293 ORTHO05D009143 1.1e-08 63.5 110 42.7
QL03p061237 Quercus lobata HOM05D007293 ORTHO05D009143 1.4e-08 63.2 107 44.9
Cfa009144 Carpinus fangiana HOM05D007293 ORTHO05D009143 1.9e-08 62.8 108 46.3
Dinv35058 Davidia involucrata HOM05D007293 ORTHO05D009143 1.9e-08 62.8 111 42.3
Psat0s2875g0160 Pisum sativum HOM05D007293 ORTHO05D009143 2.4e-08 62.4 109 48.6
Migut.H00123 Erythranthe guttata HOM05D007293 ORTHO05D009143 3.2e-08 62.0 106 49.1
Aa31LG4G10590 Aethionema arabicum HOM05D007293 ORTHO05D009143 4.1e-08 61.6 65 64.6
Medtr5g034340 Medicago truncatula HOM05D007293 ORTHO05D009143 7.1e-08 60.8 103 46.6
Lj2g0011400 Lotus japonicus HOM05D007293 ORTHO05D009143 2.1e-07 59.3 110 48.2
CsaV3_4G037870 Cucumis sativus L. HOM05D001719 ORTHO05D008883 2.7e-07 58.9 91 47.3
CiPaw.05G150900 Carya illinoinensis HOM05D007293 ORTHO05D009143 3.5e-07 58.5 107 48.6
Ca_13998_v3 Cicer arietinum L. HOM05D007293 ORTHO05D009143 4.6e-07 58.2 101 45.5
Actinidia06026 Actinidia chinensis HOM05D007293 ORTHO05D009143 6.0e-07 57.8 62 54.8
Lj7A591G78 Lonicera japonica HOM05D007293 ORTHO05D009143 6.0e-07 57.8 107 42.1
CSS0045153 Camellia sinensis var. sinensis HOM05D007293 ORTHO05D009143 7.8e-07 57.4 108 43.5
Haze_12178 Corylus avellana HOM05D007293 ORTHO05D009143 7.8e-07 57.4 103 47.6
Phvul.002G071600 Phaseolus vulgaris HOM05D007293 ORTHO05D009143 7.8e-07 57.4 104 45.2
Cc07_g02290 Coffea canephora HOM05D007293 ORTHO05D009143 1.0e-06 57.0 106 44.3
Lalb_Chr09g0326381 Lupinus albus HOM05D007293 ORTHO05D009143 1.0e-06 57.0 104 43.3
Oeu062917.1 Olea europaea HOM05D007293 ORTHO05D009143 1.0e-06 57.0 105 46.7
MSTRG.24016 Avicennia marina HOM05D007293 ORTHO05D009143 1.3e-06 56.6 73 56.2
CSS0015603 Camellia sinensis var. sinensis HOM05D007293 ORTHO05D009143 1.7e-06 56.2 104 43.3
VMungo1215G2593 Vigna mungo HOM05D007293 ORTHO05D009143 1.7e-06 56.2 99 46.5
GSVIVG01032483001 Vitis vinifera HOM05D007293 ORTHO05D009143 1.7e-06 56.2 113 44.2
TAR622G0242 Trochodendron aralioides HOM05D007293 ORTHO05D009143 2.3e-06 55.8 106 42.5
vmacro05819 Vaccinium macrocarpon HOM05D007293 ORTHO05D009143 2.3e-06 55.8 109 45.9
Aqoxy3G02974 Aquilegia oxysepala HOM05D007293 ORTHO05D009143 3.0e-06 55.5 82 51.2
arahy.Tifrunner.gnm1.ann1.HDCN36 Arachis hypogaea HOM05D007293 ORTHO05D009143 3.0e-06 55.5 109 43.1
Rhsim10G0022800 Rhododendron simsii HOM05D007293 ORTHO05D009143 3.0e-06 55.5 114 43.9
Hund05995 Selenicereus undatus HOM05D007293 ORTHO05D009143 3.0e-06 55.5 84 47.6
FAN07G2443 Fragaria x ananassa HOM05D007293 ORTHO05D009143 3.9e-06 55.1 88 50.0
CSS0040497 Camellia sinensis var. sinensis HOM05D007293 ORTHO05D009143 5.1e-06 54.7 108 41.7
CSS0049977 Camellia sinensis var. sinensis HOM05D007293 ORTHO05D009143 5.1e-06 54.7 100 43.0
DCAR_011205 Daucus carota HOM05D007293 ORTHO05D009143 5.1e-06 54.7 108 42.6
Nn3g16892 Nelumbo nucifera HOM05D007293 ORTHO05D009143 5.1e-06 54.7 46 65.2
CDE06G2495 Ceratophyllum demersum HOM05D007293 ORTHO05D009143 6.6e-06 54.3 47 63.8
Os01g0738000 Oryza sativa ssp. japonica HOM05D007293 ORTHO05D009143 6.6e-06 54.3 107 44.9


User provided reference genes

Program Settings