Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C02p27580 Brassica napus HOM05D000732 ORTHO05D039473 6.3e-76 287.3 143 100.0
BcaC03g15178 Brassica carinata HOM05D000732 ORTHO05D039473 4.9e-20 101.7 53 94.3
Sp5g25460 Schrenkiella parvula HOM05D000732 ORTHO05D007225 1.3e-09 67.0 58 62.1
CARHR063520 Cardamine hirsuta HOM05D000732 ORTHO05D007225 4.3e-08 62.0 70 54.3
AL1G37550 Arabidopsis lyrata HOM05D000732 ORTHO05D007225 2.8e-07 59.3 50 54.0
AT1G23790 Arabidopsis thaliana HOM05D000732 ORTHO05D007225 4.7e-07 58.5 50 54.0
Thhalv10007309m.g Eutrema salsugineum HOM05D000732 ORTHO05D007225 4.7e-07 58.5 50 54.0
Carub.0002s1703 Capsella rubella HOM05D000732 ORTHO05D007225 1.1e-06 57.4 58 55.2
AL2G29650 Arabidopsis lyrata HOM05D000732 ORTHO05D007225 1.4e-06 57.0 69 49.3
CARHR024210 Cardamine hirsuta HOM05D000732 ORTHO05D007225 1.8e-06 56.6 50 54.0
Glyma.02G034500 Glycine max HOM05D000732 ORTHO05D007225 1.8e-06 56.6 58 50.0
Glyma.01G031300 Glycine max HOM05D000732 ORTHO05D007225 2.4e-06 56.2 58 50.0
PGR102G0434 Punica granatum HOM05D000732 ORTHO05D007225 2.4e-06 56.2 58 53.4
THA.LOC104808945 Tarenaya hassleriana HOM05D000732 ORTHO05D007225 2.4e-06 56.2 58 51.7
Lalb_Chr05g0216901 Lupinus albus HOM05D000732 ORTHO05D007225 3.1e-06 55.8 58 51.7
Aa31LG4G10600 Aethionema arabicum HOM05D000732 ORTHO05D007225 4.0e-06 55.5 58 51.7
AT1G70340 Arabidopsis thaliana HOM05D000732 ORTHO05D007225 4.0e-06 55.5 69 46.4
BcaB03g11954 Brassica carinata HOM05D000732 ORTHO05D007225 4.0e-06 55.5 50 52.0
BcaC07g39214 Brassica carinata HOM05D000732 ORTHO05D007225 4.0e-06 55.5 50 52.0
A08p28020 Brassica napus HOM05D000732 ORTHO05D007225 4.0e-06 55.5 50 52.0
C08p22100 Brassica napus HOM05D000732 ORTHO05D007225 4.0e-06 55.5 50 52.0
BolC8t49855H Brassica oleracea HOM05D000732 ORTHO05D007225 4.0e-06 55.5 50 52.0
BraA08t34732Z Brassica rapa HOM05D000732 ORTHO05D007225 4.0e-06 55.5 50 52.0
VMungo1215G1082 Vigna mungo HOM05D000732 ORTHO05D007225 4.0e-06 55.5 46 56.5
Carub.0001s2330 Capsella rubella HOM05D000732 ORTHO05D007225 5.2e-06 55.1 50 52.0
Sp1g21170 Schrenkiella parvula HOM05D000732 ORTHO05D007225 5.2e-06 55.1 50 52.0
Ca_04598_v3 Cicer arietinum L. HOM05D000732 ORTHO05D007225 6.8e-06 54.7 58 50.0
TWI75G0496 Tripterygium wilfordii HOM05D000732 ORTHO05D007225 8.9e-06 54.3 58 51.7


User provided reference genes

Program Settings