Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C02p27420 Brassica napus HOM05D000459 ORTHO05D000798 1.7e-45 185.7 96 100.0
C01p32960 Brassica napus HOM05D000459 ORTHO05D000798 2.4e-39 165.2 96 90.6
C06p20260 Brassica napus HOM05D000459 ORTHO05D000798 4.5e-38 161.0 98 88.8
C04p23560 Brassica napus HOM05D000459 ORTHO05D000798 5.9e-38 160.6 96 90.6
BolC6t37206H Brassica oleracea HOM05D000459 ORTHO05D000798 1.2e-25 119.8 98 69.4
BraA06t24085Z Brassica rapa HOM05D000459 ORTHO05D000798 3.4e-25 118.2 76 81.6
BolC1t03235H Brassica oleracea HOM05D000459 ORTHO05D000798 9.8e-25 116.7 70 91.4
BcaC05g25159 Brassica carinata HOM05D000459 ORTHO05D000798 2.2e-24 115.5 78 87.2
C05p10540 Brassica napus HOM05D000459 ORTHO05D000798 2.2e-24 115.5 78 87.2
BolC2t08802H Brassica oleracea HOM05D000459 ORTHO05D000798 3.7e-24 114.8 103 64.1
BolC5t29799H Brassica oleracea HOM05D000459 ORTHO05D000798 3.7e-24 114.8 80 85.0
BcaC07g41682 Brassica carinata HOM05D000459 ORTHO05D000798 1.1e-23 113.2 81 76.5
BolC8t52252H Brassica oleracea HOM05D000459 ORTHO05D000798 1.1e-23 113.2 81 76.5
BcaC09g49786 Brassica carinata HOM05D000459 ORTHO05D000798 4.1e-23 111.3 70 88.6
C08p47130 Brassica napus HOM05D000459 ORTHO05D000798 1.2e-22 109.8 81 75.3
BcaB08g34251 Brassica carinata HOM05D000459 ORTHO05D000798 1.0e-21 106.7 86 72.1
BraA09t41712Z Brassica rapa HOM05D000459 ORTHO05D000798 1.5e-20 102.8 82 72.0
A06p08930 Brassica napus HOM05D000459 ORTHO05D000798 2.5e-20 102.1 79 81.0
A09p63630 Brassica napus HOM05D000459 ORTHO05D000798 2.5e-20 102.1 84 70.2
C08p15600 Brassica napus HOM05D000459 ORTHO05D000798 1.4e-18 96.3 81 70.4
BolC8t49187H Brassica oleracea HOM05D000459 ORTHO05D000798 1.4e-18 96.3 81 70.4
BcaC05g25116 Brassica carinata HOM05D000459 ORTHO05D000798 5.2e-18 94.4 67 85.1
A08p32680 Brassica napus HOM05D000459 ORTHO05D000798 8.9e-18 93.6 82 68.3
BraA08t35191Z Brassica rapa HOM05D000459 ORTHO05D000798 8.9e-18 93.6 82 68.3
BcaB03g13172 Brassica carinata HOM05D000459 ORTHO05D000798 2.0e-17 92.4 83 67.5
Carub.0001s1247 Capsella rubella HOM05D000459 ORTHO05D000798 3.9e-13 78.2 74 67.6
CARHR013050 Cardamine hirsuta HOM05D000459 ORTHO05D000798 1.1e-12 76.6 74 66.2
Thhalv10007780m.g Eutrema salsugineum HOM05D000459 ORTHO05D000798 5.6e-12 74.3 79 63.3
AL1G24350 Arabidopsis lyrata HOM05D000459 ORTHO05D000798 1.2e-11 73.2 76 63.2
Sp1g11320 Schrenkiella parvula HOM05D000459 ORTHO05D000798 6.2e-11 70.9 80 61.2
Aa31LG1G1980 Aethionema arabicum HOM05D000459 ORTHO05D000798 3.1e-10 68.6 100 48.0
AT1G12760 Arabidopsis thaliana HOM05D000459 ORTHO05D000798 4.0e-10 68.2 75 61.3
Peaxi162Scf00959g00414 Petunia axillaris HOM05D000459 ORTHO05D000798 2.6e-09 65.5 41 70.7
THA.LOC104823578 Tarenaya hassleriana HOM05D000459 ORTHO05D000798 2.6e-09 65.5 76 57.9
Nitab4.5_0003865g0040 Nicotiana tabacum HOM05D000459 ORTHO05D000798 5.8e-09 64.3 42 69.0
THA.LOC104814349 Tarenaya hassleriana HOM05D000459 ORTHO05D000798 9.9e-09 63.5 69 47.8
CsaV3_3G003540 Cucumis sativus L. HOM05D000459 ORTHO05D000798 1.3e-08 63.2 67 49.3
Oeu033967.1 Olea europaea HOM05D000459 ORTHO05D000798 2.2e-08 62.4 41 68.3
arahy.Tifrunner.gnm1.ann1.J1PMCL Arachis hypogaea HOM05D000459 ORTHO05D000798 2.9e-08 62.0 44 59.1
BcaC06g30740 Brassica carinata HOM05D000459 ORTHO05D000798 2.9e-08 62.0 29 96.6
BolC7t44477H Brassica oleracea HOM05D000459 ORTHO05D000798 2.9e-08 62.0 29 96.6
MBI12_g43908_MAGBIO Magnolia biondii HOM05D000459 ORTHO05D000798 3.8e-08 61.6 36 69.4
ClCG00G000270 Citrullus lanatus HOM05D000459 ORTHO05D000798 4.9e-08 61.2 74 47.3
ClCG00G001780 Citrullus lanatus HOM05D000459 ORTHO05D000798 4.9e-08 61.2 74 47.3
ClCG10G003530 Citrullus lanatus HOM05D000459 ORTHO05D000798 4.9e-08 61.2 74 47.3
Dinv37675 Davidia involucrata HOM05D000459 ORTHO05D000798 4.9e-08 61.2 38 73.7
CSS0013709 Camellia sinensis var. sinensis HOM05D000459 ORTHO05D000798 6.4e-08 60.8 41 65.9
MELO3C014022.2 Cucumis melo HOM05D000459 ORTHO05D000798 6.4e-08 60.8 67 47.8
Lalb_Chr05g0225011 Lupinus albus HOM05D000459 ORTHO05D000798 6.4e-08 60.8 59 54.2
Nn1g01399 Nelumbo nucifera HOM05D000459 ORTHO05D000798 8.4e-08 60.5 37 67.6
Rhsim07G0093400 Rhododendron simsii HOM05D000459 ORTHO05D000798 8.4e-08 60.5 38 71.1
TAR629G2473 Trochodendron aralioides HOM05D000459 ORTHO05D000798 8.4e-08 60.5 60 51.7
COL.COLO4_05256 Corchorus olitorius HOM05D000459 ORTHO05D000798 1.1e-07 60.1 38 65.8
Duzib068G1043 Durio zibethinus HOM05D000459 ORTHO05D000798 1.1e-07 60.1 36 72.2
Glyma.17G130700 Glycine max HOM05D000459 ORTHO05D000798 1.1e-07 60.1 42 64.3
SGA_v2.0_scaffold277G46686 Striga asiatica HOM05D000459 ORTHO05D000798 1.1e-07 60.1 81 45.7
Aa31LG2G640 Aethionema arabicum HOM05D000459 ORTHO05D000798 1.4e-07 59.7 37 67.6
CSS0036091 Camellia sinensis var. sinensis HOM05D000459 ORTHO05D000798 1.4e-07 59.7 40 65.0
Peaxi162Scf00021g01017 Petunia axillaris HOM05D000459 ORTHO05D000798 1.4e-07 59.7 42 61.9
Thecc.03G272800 Theobroma cacao HOM05D000459 ORTHO05D000798 1.4e-07 59.7 37 70.3
Aqoxy7G00416 Aquilegia oxysepala HOM05D000459 ORTHO05D000798 1.9e-07 59.3 44 61.4
MSTRG.20805 Avicennia marina HOM05D000459 ORTHO05D000798 1.9e-07 59.3 40 65.0
Gohir.A11G021500 Gossypium hirsutum HOM05D000459 ORTHO05D000798 1.9e-07 59.3 67 50.7
Lj2g0004754 Lotus japonicus HOM05D000459 ORTHO05D000798 1.9e-07 59.3 45 60.0
Medtr4g102870 Medicago truncatula HOM05D000459 ORTHO05D000798 1.9e-07 59.3 40 67.5
Psat4g066800 Pisum sativum HOM05D000459 ORTHO05D000798 1.9e-07 59.3 95 36.8
PGR031G3582 Punica granatum HOM05D000459 ORTHO05D000798 1.9e-07 59.3 36 69.4
Ciclev10020554m.g Citrus clementina HOM05D000459 ORTHO05D000798 2.4e-07 58.9 40 65.0
Dinv38995 Davidia involucrata HOM05D000459 ORTHO05D000798 2.4e-07 58.9 38 71.1
Gohir.D11G021200 Gossypium hirsutum HOM05D000459 ORTHO05D000798 2.4e-07 58.9 67 50.7
Gorai.007G022500 Gossypium raimondii HOM05D000459 ORTHO05D000798 2.4e-07 58.9 67 50.7
Manes.02G025600 Manihot esculenta HOM05D000459 ORTHO05D000798 2.4e-07 58.9 34 70.6
Solyc05g051040.4 Solanum lycopersicum HOM05D000459 ORTHO05D000798 2.4e-07 58.9 76 47.4
PGSC0003DMG400006990 Solanum tuberosum HOM05D000459 ORTHO05D000798 2.4e-07 58.9 75 45.3
Eucgr.D01910 Eucalyptus grandis HOM05D000459 ORTHO05D000798 4.2e-07 58.2 72 48.6
Glyma.05G048800 Glycine max HOM05D000459 ORTHO05D000798 4.2e-07 58.2 40 65.0
Gohir.A03G018201 Gossypium hirsutum HOM05D000459 ORTHO05D000798 4.2e-07 58.2 38 63.2
Gohir.A08G179200 Gossypium hirsutum HOM05D000459 ORTHO05D000798 4.2e-07 58.2 38 65.8
Gohir.D03G153400 Gossypium hirsutum HOM05D000459 ORTHO05D000798 4.2e-07 58.2 38 63.2
Gorai.003G161000 Gossypium raimondii HOM05D000459 ORTHO05D000798 4.2e-07 58.2 38 63.2
Oeu056331.1 Olea europaea HOM05D000459 ORTHO05D000798 4.2e-07 58.2 41 63.4
Sed0021492 Sechium edule HOM05D000459 ORTHO05D000798 4.2e-07 58.2 36 69.4
MBI04_g33643_MAGBIO Magnolia biondii HOM05D000459 ORTHO05D000798 5.4e-07 57.8 73 45.2
Nn6g34209 Nelumbo nucifera HOM05D000459 ORTHO05D000798 5.4e-07 57.8 66 48.5
GSVIVG01027503001 Vitis vinifera HOM05D000459 ORTHO05D000798 5.4e-07 57.8 39 64.1
Migut.B01705 Erythranthe guttata HOM05D000459 ORTHO05D000798 7.1e-07 57.4 42 61.9
Potri.003G123300 Populus trichocarpa HOM05D000459 ORTHO05D000798 7.1e-07 57.4 36 69.4
Gohir.A12G225700 Gossypium hirsutum HOM05D000459 ORTHO05D000798 9.3e-07 57.0 37 67.6
Lsat_1_v5_gn_3_136160 Lactuca sativa HOM05D000459 ORTHO05D000798 9.3e-07 57.0 41 61.0
Nitab4.5_0006421g0040 Nicotiana tabacum HOM05D000459 ORTHO05D000798 9.3e-07 57.0 44 59.1
Nitab4.5_0009878g0010 Nicotiana tabacum HOM05D000459 ORTHO05D000798 9.3e-07 57.0 44 59.1
Sopen05g029490 Solanum pennellii HOM05D000459 ORTHO05D000798 9.3e-07 57.0 75 44.0
vmacro13931 Vaccinium macrocarpon HOM05D000459 ORTHO05D000798 9.3e-07 57.0 36 63.9
Actinidia33436 Actinidia chinensis HOM05D000459 ORTHO05D000798 1.2e-06 56.6 75 42.7
ATR0757G215 Amborella trichopoda HOM05D000459 ORTHO05D000798 1.2e-06 56.6 42 54.8
CiPaw.11G139700 Carya illinoinensis HOM05D000459 ORTHO05D000798 1.2e-06 56.6 78 42.3
Dinv32436 Davidia involucrata HOM05D000459 ORTHO05D000798 1.2e-06 56.6 44 59.1
QL12p017564 Quercus lobata HOM05D000459 ORTHO05D000798 1.2e-06 56.6 40 65.0
THA.LOC104818161 Tarenaya hassleriana HOM05D000459 ORTHO05D000798 1.2e-06 56.6 69 55.1
VMungo1215G3360 Vigna mungo HOM05D000459 ORTHO05D000798 1.2e-06 56.6 67 46.3
Actinidia12719 Actinidia chinensis HOM05D000459 ORTHO05D000798 1.6e-06 56.2 75 42.7
MSTRG.17241 Avicennia marina HOM05D000459 ORTHO05D000798 1.6e-06 56.2 82 41.5
CAN.G170.21 Capsicum annuum HOM05D000459 ORTHO05D000798 1.6e-06 56.2 44 56.8
Gorai.004G208600 Gossypium raimondii HOM05D000459 ORTHO05D000798 1.6e-06 56.2 71 47.9
Lalb_Chr09g0333231 Lupinus albus HOM05D000459 ORTHO05D000798 1.6e-06 56.2 67 43.3
Medtr5g010720 Medicago truncatula HOM05D000459 ORTHO05D000798 1.6e-06 56.2 73 45.2
PSO478G1602 Papaver somniferum HOM05D000459 ORTHO05D000798 1.6e-06 56.2 37 64.9
PSO782G4780 Papaver somniferum HOM05D000459 ORTHO05D000798 1.6e-06 56.2 37 64.9
TPR.G6678 Trifolium pratense HOM05D000459 ORTHO05D000798 1.6e-06 56.2 42 59.5
Cc02_g37400 Coffea canephora HOM05D000459 ORTHO05D000798 2.1e-06 55.8 40 60.0
Phvul.002G155000 Phaseolus vulgaris HOM05D000459 ORTHO05D000798 2.1e-06 55.8 84 42.9
Phvul.003G211600 Phaseolus vulgaris HOM05D000459 ORTHO05D000798 2.1e-06 55.8 35 65.7
Psat0s2972g0120 Pisum sativum HOM05D000459 ORTHO05D000798 2.1e-06 55.8 42 57.1
RcHm_v2.0_Chr7g0198981 Rosa chinensis HOM05D000459 ORTHO05D000798 2.1e-06 55.8 74 45.9
SGA_v2.0_scaffold43G16455 Striga asiatica HOM05D000487 ORTHO05D000405 2.1e-06 55.8 82 43.9
vmacro13327 Vaccinium macrocarpon HOM05D000459 ORTHO05D000798 2.1e-06 55.8 38 63.2
Gohir.D08G197800 Gossypium hirsutum HOM05D000459 ORTHO05D000798 2.7e-06 55.5 70 48.6
Prupe.5G092900 Prunus persica HOM05D000459 ORTHO05D000798 2.7e-06 55.5 66 47.0
BcaC06g31940 Brassica carinata HOM05D000459 ORTHO05D000798 3.5e-06 55.1 47 57.4
CiPaw.12G097100 Carya illinoinensis HOM05D000459 ORTHO05D000798 3.5e-06 55.1 78 41.0
Duzib133G0664 Durio zibethinus HOM05D000459 ORTHO05D000798 3.5e-06 55.1 40 57.5
HPP92_025370 Vanilla planifolia HOM05D000459 ORTHO05D000798 3.5e-06 55.1 37 59.5
HPP92_025496 Vanilla planifolia HOM05D000459 ORTHO05D000798 3.5e-06 55.1 37 59.5
CANSAT35G0596 Cannabis sativa HOM05D000459 ORTHO05D000798 4.6e-06 54.7 37 64.9
FvH4_5g01740 Fragaria vesca HOM05D000459 ORTHO05D000798 4.6e-06 54.7 40 57.5
FAN18G4567 Fragaria x ananassa HOM05D000459 ORTHO05D000798 4.6e-06 54.7 40 57.5
MD00G1110500 Malus domestica HOM05D000459 ORTHO05D000798 4.6e-06 54.7 66 47.0
Sc07g0009590 Simmondsia chinensis HOM05D000459 ORTHO05D000798 4.6e-06 54.7 38 60.5
TAR636G1629 Trochodendron aralioides HOM05D000459 ORTHO05D000798 4.6e-06 54.7 37 59.5
VMungo1215G1790 Vigna mungo HOM05D000459 ORTHO05D000798 4.6e-06 54.7 34 64.7
BraA09t37001Z Brassica rapa HOM05D000459 ORTHO05D000798 6.0e-06 54.3 48 56.2
Ca_06655_v3 Cicer arietinum L. HOM05D000459 ORTHO05D000798 6.0e-06 54.3 42 54.8
Thhalv10018815m.g Eutrema salsugineum HOM05D000459 ORTHO05D000798 6.0e-06 54.3 90 36.7
FAN04G1162 Fragaria x ananassa HOM05D000459 ORTHO05D000798 6.0e-06 54.3 40 60.0
HanXRQChr06g0169761 Helianthus annuus HOM05D000459 ORTHO05D000798 6.0e-06 54.3 41 58.5
Actinidia05221 Actinidia chinensis HOM05D000459 ORTHO05D000798 7.8e-06 53.9 36 61.1
ECA236G5145 Erigeron canadensis HOM05D000459 ORTHO05D000798 7.8e-06 53.9 87 36.8
Solyc01g091600.4 Solanum lycopersicum HOM05D000459 ORTHO05D000798 7.8e-06 53.9 72 43.1
THA.LOC104806376 Tarenaya hassleriana HOM05D000459 ORTHO05D000798 7.8e-06 53.9 35 65.7


User provided reference genes

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