Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C02p27360 Brassica napus HOM05D003645 ORTHO05D032460 8.2e-25 116.3 61 100.0
BolC2t08796H Brassica oleracea HOM05D003645 ORTHO05D032460 8.2e-25 116.3 61 100.0
BcaC03g15162 Brassica carinata HOM05D054637 ORTHO05D032460 1.1e-24 115.9 61 98.4
BcaC09g50929 Brassica carinata HOM05D003645 ORTHO05D004395 7.9e-12 73.2 60 66.7
A01p15240 Brassica napus HOM05D003645 ORTHO05D004395 7.9e-12 73.2 60 66.7
C01p19170 Brassica napus HOM05D003645 ORTHO05D004395 7.9e-12 73.2 60 66.7
BolC1t01843H Brassica oleracea HOM05D003645 ORTHO05D004395 7.9e-12 73.2 60 66.7
BraA01t01462Z Brassica rapa HOM05D003645 ORTHO05D004395 7.9e-12 73.2 60 66.7
BcaNung01100 Brassica carinata HOM05D003645 ORTHO05D004395 1.0e-11 72.8 60 66.7
Thhalv10026760m.g Eutrema salsugineum HOM05D003645 ORTHO05D004395 1.8e-11 72.0 60 63.3
Sp7g21900 Schrenkiella parvula HOM05D003645 ORTHO05D004395 1.8e-11 72.0 60 65.0
A03p54860 Brassica napus HOM05D003645 ORTHO05D004395 3.0e-11 71.2 60 65.0
BraA03t14553Z Brassica rapa HOM05D003645 ORTHO05D004395 3.0e-11 71.2 60 65.0
AL7G29380 Arabidopsis lyrata HOM05D003645 ORTHO05D004395 3.9e-11 70.9 60 65.0
Carub.0007s1715 Capsella rubella HOM05D003645 ORTHO05D004395 3.9e-11 70.9 60 63.3
CARHR231360 Cardamine hirsuta HOM05D003645 ORTHO05D004395 3.9e-11 70.9 60 63.3
C07p53240 Brassica napus HOM05D003645 ORTHO05D004395 6.7e-11 70.1 60 63.3
BolC7t45819H Brassica oleracea HOM05D003645 ORTHO05D004395 6.7e-11 70.1 60 63.3
AT4G23930 Arabidopsis thaliana HOM05D003645 ORTHO05D004395 1.5e-10 68.9 60 63.3
BcaNung04245 Brassica carinata HOM05D003645 ORTHO05D004395 7.4e-10 66.6 60 60.0
BcaNung04246 Brassica carinata HOM05D003645 ORTHO05D004395 7.4e-10 66.6 60 60.0
Aa31LG6G7170 Aethionema arabicum HOM05D003645 ORTHO05D004395 6.3e-09 63.5 60 56.7
THA.LOC104806437 Tarenaya hassleriana HOM05D003645 ORTHO05D004395 8.2e-09 63.2 60 55.0


User provided reference genes

Program Settings