Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C02p26240 Brassica napus HOM05D004342 ORTHO05D040487 7.0e-77 290.4 135 100.0
BolC2t08690H Brassica oleracea HOM05D004342 ORTHO05D040487 6.8e-72 273.9 135 94.1
BcaC03g16189 Brassica carinata HOM05D004342 ORTHO05D011040 1.3e-54 216.5 222 55.4
C04p46690 Brassica napus HOM05D004342 ORTHO05D011040 2.0e-52 209.1 262 48.1
BolC4t26257H Brassica oleracea HOM05D004342 ORTHO05D011040 1.7e-51 206.1 271 46.5
BcaC03g15908 Brassica carinata HOM05D004342 ORTHO05D011040 3.3e-50 201.8 262 46.9
BraA04t16111Z Brassica rapa HOM05D004342 ORTHO05D011040 3.3e-50 201.8 261 47.1
C02p48390 Brassica napus HOM05D004342 ORTHO05D011040 1.5e-47 193.0 259 45.6
BolC2t10870H Brassica oleracea HOM05D004342 ORTHO05D011040 1.5e-47 193.0 259 45.6
C04p26830 Brassica napus HOM05D004342 ORTHO05D011040 2.0e-47 192.6 262 45.8
C09p56360 Brassica napus HOM05D004342 ORTHO05D011040 2.6e-47 192.2 260 46.2
BolC9t58505H Brassica oleracea HOM05D004342 ORTHO05D011040 3.4e-47 191.8 262 45.8
BraA02t07939Z Brassica rapa HOM05D004342 ORTHO05D107931 3.4e-47 191.8 273 44.0
BolC4t24121H Brassica oleracea HOM05D004342 ORTHO05D011040 4.4e-47 191.4 271 44.6
BcaC04g19377 Brassica carinata HOM05D004342 ORTHO05D011040 2.9e-46 188.7 261 45.6
BcaB02g10664 Brassica carinata HOM05D004342 ORTHO05D011040 2.8e-41 172.2 244 41.0
BcaB03g16647 Brassica carinata HOM05D004342 ORTHO05D011040 6.2e-41 171.0 266 41.0
BcaB03g16622 Brassica carinata HOM05D004342 ORTHO05D011040 1.8e-40 169.5 246 40.2
BcaB08g35285 Brassica carinata HOM05D004342 ORTHO05D011040 1.8e-40 169.5 264 38.6
BolC2t09984H Brassica oleracea HOM05D004342 ORTHO05D107287 3.1e-40 168.7 227 46.3
BcaB08g35403 Brassica carinata HOM05D004342 ORTHO05D011040 4.0e-40 168.3 244 42.6
BcaB01g02102 Brassica carinata HOM05D004342 ORTHO05D011040 6.8e-40 167.5 264 38.6
BcaC05g27753 Brassica carinata HOM05D004342 ORTHO05D032754 1.2e-39 166.8 247 42.9
C07p02600 Brassica napus HOM05D004342 ORTHO05D040391 1.2e-39 166.8 242 40.9
BolC7t40658H Brassica oleracea HOM05D004342 ORTHO05D040391 1.2e-39 166.8 242 40.9
BcaB08g35473 Brassica carinata HOM05D004342 ORTHO05D011040 1.5e-39 166.4 266 39.8
BcaB01g01402 Brassica carinata HOM05D004342 ORTHO05D011040 2.0e-39 166.0 266 39.8
BolC6t36906H Brassica oleracea HOM05D004342 ORTHO05D011040 5.8e-39 164.5 263 39.5
BolC2t09673H Brassica oleracea HOM05D004342 ORTHO05D042860 2.9e-38 162.2 220 46.4
BolC3t19271H Brassica oleracea HOM05D004342 ORTHO05D032754 4.9e-38 161.4 217 46.1
BcaB02g06560 Brassica carinata HOM05D004342 ORTHO05D011040 6.4e-38 161.0 252 38.9
BcaB06g27914 Brassica carinata HOM05D004342 ORTHO05D011040 6.4e-38 161.0 265 37.0
BcaB05g23453 Brassica carinata HOM05D004342 ORTHO05D011040 1.9e-37 159.5 264 37.1
BcaB05g23589 Brassica carinata HOM05D004342 ORTHO05D011040 3.2e-37 158.7 270 37.4
BcaB08g34712 Brassica carinata HOM05D004342 ORTHO05D011040 2.1e-36 156.0 136 57.4
BcaB07g32852 Brassica carinata HOM05D004342 ORTHO05D011040 2.7e-36 155.6 253 39.5
BcaB08g35544 Brassica carinata HOM05D004342 ORTHO05D011040 2.7e-36 155.6 253 37.5
C03p70160 Brassica napus HOM05D004342 ORTHO05D011040 2.7e-36 155.6 235 41.7
BcaB05g23725 Brassica carinata HOM05D004342 ORTHO05D011040 7.8e-36 154.1 247 39.3
BcaB07g33971 Brassica carinata HOM05D004342 ORTHO05D011040 1.0e-35 153.7 242 38.8
C05p37450 Brassica napus HOM05D004342 ORTHO05D032754 5.6e-34 147.9 220 43.6
BcaB04g18145 Brassica carinata HOM05D004342 ORTHO05D011040 2.1e-33 146.0 245 38.0
BcaB06g27477 Brassica carinata HOM05D004342 ORTHO05D011040 2.1e-33 146.0 253 37.5
BcaB06g27355 Brassica carinata HOM05D004342 ORTHO05D011040 3.6e-33 145.2 176 47.2
BcaC08g47011 Brassica carinata HOM05D004342 ORTHO05D011040 1.8e-32 142.9 252 37.7
BcaC01g01958 Brassica carinata HOM05D004342 ORTHO05D090434 1.5e-31 139.8 141 54.6
BolC7t40696H Brassica oleracea HOM05D004342 ORTHO05D042740 2.2e-30 136.0 245 37.6
C07p03020 Brassica napus HOM05D004342 ORTHO05D042740 1.1e-29 133.7 245 37.6
A02p29080 Brassica napus HOM05D004342 ORTHO05D042860 6.0e-28 127.9 211 41.2
BcaB02g11238 Brassica carinata HOM05D004342 ORTHO05D011040 8.7e-27 124.0 140 48.6
BolC5t32015H Brassica oleracea HOM05D004342 ORTHO05D041540 8.7e-27 124.0 208 39.9
C05p32840 Brassica napus HOM05D004342 ORTHO05D041540 1.1e-26 123.6 208 39.9
BolC2t09619H Brassica oleracea HOM05D004342 ORTHO05D033291 5.6e-26 121.3 206 38.3
C04p30590 Brassica napus HOM05D004342 ORTHO05D097110 1.6e-25 119.8 124 51.6
BraA01t02418Z Brassica rapa HOM05D004342 ORTHO05D011040 1.6e-25 119.8 262 33.2
BolC8t47411H Brassica oleracea HOM05D004342 ORTHO05D106550 2.1e-25 119.4 140 52.1
C06p17080 Brassica napus HOM05D004342 ORTHO05D016748 1.1e-24 117.1 144 45.8
BolC5t33355H Brassica oleracea HOM05D004342 ORTHO05D016748 1.4e-24 116.7 141 46.1
C05p46270 Brassica napus HOM05D004342 ORTHO05D016748 5.3e-24 114.8 141 46.1
A07p06040 Brassica napus HOM05D004342 ORTHO05D101341 3.4e-23 112.1 117 51.3
C02p36040 Brassica napus HOM05D004342 ORTHO05D033291 3.4e-23 112.1 200 38.5
BolC8t47840H Brassica oleracea HOM05D004342 ORTHO05D016748 4.5e-23 111.7 144 44.4
BolC3t21133H Brassica oleracea HOM05D004342 ORTHO05D016748 5.8e-23 111.3 143 45.5
C02p39700 Brassica napus HOM05D004342 ORTHO05D099964 2.2e-22 109.4 109 56.0
BolC8t49973H Brassica oleracea HOM05D004342 ORTHO05D042841 3.8e-22 108.6 180 37.8
BraA10t42852Z Brassica rapa HOM05D004342 ORTHO05D013036 3.8e-22 108.6 143 42.0
A10p05900 Brassica napus HOM05D004342 ORTHO05D013036 2.4e-21 105.9 143 40.6
BraA10t43034Z Brassica rapa HOM05D004342 ORTHO05D013036 4.2e-21 105.1 143 41.3
A05p24900 Brassica napus HOM05D004342 ORTHO05D013036 7.1e-21 104.4 143 40.6
A01p25070 Brassica napus HOM05D004342 ORTHO05D011040 1.2e-20 103.6 204 37.3
A06p23950 Brassica napus HOM05D004342 ORTHO05D013036 1.2e-20 103.6 143 40.6
BraA06t25485Z Brassica rapa HOM05D004342 ORTHO05D013036 1.6e-20 103.2 140 40.7
BraA04t16568Z Brassica rapa HOM05D004342 ORTHO05D013036 2.7e-20 102.4 164 38.4
A06p24190 Brassica napus HOM05D004342 ORTHO05D013036 3.5e-20 102.1 143 39.9
BraSC35t45984Z Brassica rapa HOM05D004342 ORTHO05D014936 3.5e-20 102.1 150 42.7
C08p05970 Brassica napus HOM05D004342 ORTHO05D098872 6.0e-20 101.3 50 94.0
C02p36010 Brassica napus HOM05D004342 ORTHO05D033291 7.9e-20 100.9 188 37.2
A05p21050 Brassica napus HOM05D004342 ORTHO05D013036 1.0e-19 100.5 143 39.9
C03p68080 Brassica napus HOM05D004342 ORTHO05D042288 1.0e-19 100.5 214 32.2
BolC3t19031H Brassica oleracea HOM05D004342 ORTHO05D042288 1.0e-19 100.5 214 32.2
A10p08150 Brassica napus HOM05D004342 ORTHO05D018674 3.0e-19 99.0 50 92.0
BolC6t36414H Brassica oleracea HOM05D004342 ORTHO05D042454 3.0e-19 99.0 153 41.8
A02p33870 Brassica napus HOM05D004342 ORTHO05D013036 3.9e-19 98.6 178 34.8
C02p39690 Brassica napus HOM05D004342 ORTHO05D014936 5.1e-19 98.2 53 84.9
BraA02t08405Z Brassica rapa HOM05D004342 ORTHO05D013036 5.1e-19 98.2 140 39.3
C03p67290 Brassica napus HOM05D004342 ORTHO05D033138 6.7e-19 97.8 148 40.5
BolSC21t60296H Brassica oleracea HOM05D004342 ORTHO05D033138 6.7e-19 97.8 148 40.5
BraA09t39012Z Brassica rapa HOM05D004342 ORTHO05D041860 6.7e-19 97.8 160 39.4
A06p14130 Brassica napus HOM05D004342 ORTHO05D013036 8.7e-19 97.4 178 34.8
BraA06t24546Z Brassica rapa HOM05D004342 ORTHO05D013036 1.1e-18 97.1 140 39.3
BraSC35t45983Z Brassica rapa HOM05D004342 ORTHO05D018674 2.5e-18 95.9 50 90.0
A10p08140 Brassica napus HOM05D004342 ORTHO05D014936 4.3e-18 95.1 150 40.7
A09p34820 Brassica napus HOM05D004342 ORTHO05D041860 5.6e-18 94.7 160 38.8
BolC7t41910H Brassica oleracea HOM05D004342 ORTHO05D014936 7.4e-18 94.4 53 83.0
C03p64680 Brassica napus HOM05D004342 ORTHO05D040895 1.6e-17 93.2 146 38.4
BraA01t02499Z Brassica rapa HOM05D004342 ORTHO05D013036 1.6e-17 93.2 140 37.9
C07p14140 Brassica napus HOM05D004342 ORTHO05D014936 3.6e-17 92.0 53 81.1
BolC3t18726H Brassica oleracea HOM05D004342 ORTHO05D040895 3.6e-17 92.0 141 39.0
BcaB02g10428 Brassica carinata HOM05D004342 ORTHO05D018674 4.0e-16 88.6 52 76.9
C01p35180 Brassica napus HOM05D004342 ORTHO05D028050 1.5e-15 86.7 50 78.0
C05p42390 Brassica napus HOM05D004342 ORTHO05D041824 1.5e-15 86.7 140 37.1
BolC1t03477H Brassica oleracea HOM05D004342 ORTHO05D028050 1.5e-15 86.7 50 78.0
BolC5t32968H Brassica oleracea HOM05D004342 ORTHO05D041824 1.5e-15 86.7 140 37.1
BraA07t27945Z Brassica rapa HOM05D004342 ORTHO05D014936 1.5e-15 86.7 55 74.5
BcaB06g27861 Brassica carinata HOM05D004342 ORTHO05D011040 2.0e-15 86.3 166 35.5
BcaB08g35573 Brassica carinata HOM05D004342 ORTHO05D018674 2.0e-15 86.3 67 58.2
BcaB04g17938 Brassica carinata HOM05D004342 ORTHO05D011040 2.6e-15 85.9 50 72.0
A03p64730 Brassica napus HOM05D004342 ORTHO05D013036 3.4e-15 85.5 51 70.6
C02p40210 Brassica napus HOM05D004342 ORTHO05D018674 3.4e-15 85.5 50 76.0
C02p40200 Brassica napus HOM05D004342 ORTHO05D014936 1.7e-14 83.2 47 74.5
C07p09210 Brassica napus HOM05D004342 ORTHO05D014936 1.7e-14 83.2 47 74.5
BolC7t41332H Brassica oleracea HOM05D004342 ORTHO05D014936 1.7e-14 83.2 47 74.5
A01p27340 Brassica napus HOM05D004342 ORTHO05D028050 2.2e-14 82.8 50 76.0
BraA01t02874Z Brassica rapa HOM05D004342 ORTHO05D028050 2.2e-14 82.8 50 76.0
BraA03t15562Z Brassica rapa HOM05D004342 ORTHO05D014936 2.2e-14 82.8 41 90.2
A03p66340 Brassica napus HOM05D004342 ORTHO05D018674 3.8e-14 82.0 50 74.0
BolC2t10046H Brassica oleracea HOM05D004342 ORTHO05D018674 3.8e-14 82.0 50 74.0
BraA03t15692Z Brassica rapa HOM05D004342 ORTHO05D018674 3.8e-14 82.0 50 74.0
A01p28260 Brassica napus HOM05D004342 ORTHO05D014936 8.4e-14 80.9 47 74.5
BolC5t32487H Brassica oleracea HOM05D004342 ORTHO05D016748 8.4e-14 80.9 67 59.7
BolC7t41081H Brassica oleracea HOM05D004342 ORTHO05D042200 1.4e-13 80.1 102 46.1
BcaB07g33403 Brassica carinata HOM05D004342 ORTHO05D093493 3.2e-13 79.0 44 75.0
C07p06590 Brassica napus HOM05D004342 ORTHO05D042200 5.5e-13 78.2 102 46.1
A04p03900 Brassica napus HOM05D004342 ORTHO05D018601 7.1e-13 77.8 67 58.2
BraA07t28391Z Brassica rapa HOM05D004342 ORTHO05D014936 3.5e-12 75.5 46 71.7
C08p23450 Brassica napus HOM05D004342 ORTHO05D042841 4.6e-12 75.1 47 72.3
A03p66330 Brassica napus HOM05D000062 ORTHO05D000043 6.0e-12 74.7 89 46.1
BcaB02g07288 Brassica carinata HOM05D004342 ORTHO05D016748 1.8e-11 73.2 66 57.6
C06p42390 Brassica napus HOM05D004342 ORTHO05D041978 1.8e-11 73.2 47 68.1
C06p12600 Brassica napus HOM05D004342 ORTHO05D042454 2.3e-11 72.8 163 32.5
BcaB01g01175 Brassica carinata HOM05D004342 ORTHO05D018601 3.0e-11 72.4 63 55.6
BcaC08g44285 Brassica carinata HOM05D004342 ORTHO05D016748 5.1e-11 71.6 67 55.2
C03p88250 Brassica napus HOM05D004342 ORTHO05D018601 5.1e-11 71.6 81 46.9
BolC6t39191H Brassica oleracea HOM05D004342 ORTHO05D041978 5.1e-11 71.6 42 73.8
BcaB01g02523 Brassica carinata HOM05D004342 ORTHO05D016748 6.7e-11 71.2 66 56.1
BcaB05g23199 Brassica carinata HOM05D004342 ORTHO05D011040 8.7e-11 70.9 176 33.0
C06p19750 Brassica napus HOM05D003441 ORTHO05D004516 1.1e-10 70.5 154 35.1
BcaC01g01112 Brassica carinata HOM05D004342 ORTHO05D016748 2.5e-10 69.3 66 56.1
BcaB07g33226 Brassica carinata HOM05D004342 ORTHO05D014936 5.6e-10 68.2 40 72.5
BraA06t26508Z Brassica rapa HOM05D004342 ORTHO05D013036 1.2e-07 60.5 64 50.0
C01p33380 Brassica napus HOM05D004342 ORTHO05D101940 1.5e-07 60.1 45 60.0
BraA06t25909Z Brassica rapa HOM05D004342 ORTHO05D013036 1.5e-07 60.1 64 50.0
A06p35820 Brassica napus HOM05D004342 ORTHO05D013036 2.6e-07 59.3 67 47.8
BraA05t21009Z Brassica rapa HOM05D004342 ORTHO05D013036 2.6e-07 59.3 64 50.0
BcaB04g18376 Brassica carinata HOM05D004342 ORTHO05D018601 3.4e-07 58.9 67 47.8
BraA07t27946Z Brassica rapa HOM05D004342 ORTHO05D108557 1.3e-06 57.0 38 63.2
BraA06t25627Z Brassica rapa HOM05D004342 ORTHO05D107595 2.2e-06 56.2 49 55.1
A07p06290 Brassica napus HOM05D004342 ORTHO05D099060 4.9e-06 55.1 67 46.3


User provided reference genes

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