Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C02p26050 Brassica napus HOM05D007568 ORTHO05D009779 1.6e-149 532.7 259 100.0
A05p27540 Brassica napus HOM05D007568 ORTHO05D009779 2.2e-143 512.3 259 96.9
BolC4t25354H Brassica oleracea HOM05D007568 ORTHO05D009779 1.4e-142 509.6 259 96.5
C02p26010 Brassica napus HOM05D007568 ORTHO05D009779 2.3e-100 369.4 223 78.9
BraA09t40709Z Brassica rapa HOM05D007568 ORTHO05D009779 9.9e-80 300.8 250 60.4
BcaC05g26582 Brassica carinata HOM05D007568 ORTHO05D009779 1.2e-72 277.3 173 78.6
BcaB07g31875 Brassica carinata HOM05D007568 ORTHO05D009779 2.0e-72 276.6 245 55.9
BcaB05g25263 Brassica carinata HOM05D007568 ORTHO05D009779 7.1e-70 268.1 245 55.1
BcaB04g18340 Brassica carinata HOM05D007568 ORTHO05D009779 1.8e-65 253.4 234 54.3
C07p00760 Brassica napus HOM05D007568 ORTHO05D009779 1.9e-54 216.9 244 45.1
BcaC01g06154 Brassica carinata HOM05D007568 ORTHO05D009779 4.3e-51 205.7 225 45.8
BcaB04g20792 Brassica carinata HOM05D007568 ORTHO05D009779 1.3e-50 204.1 245 46.9
BolC3t14260H Brassica oleracea HOM05D007568 ORTHO05D009779 2.2e-50 203.4 225 45.3
C03p18690 Brassica napus HOM05D007568 ORTHO05D009779 4.8e-50 202.2 225 45.3
C09p27130 Brassica napus HOM05D007568 ORTHO05D009779 1.1e-49 201.1 225 45.3
BolC9t55448H Brassica oleracea HOM05D007568 ORTHO05D009779 2.4e-49 199.9 225 45.3
A02p32020 Brassica napus HOM05D007568 ORTHO05D009779 3.1e-49 199.5 225 44.4
BraA02t08213Z Brassica rapa HOM05D007568 ORTHO05D009779 3.1e-49 199.5 225 44.4
A08p24970 Brassica napus HOM05D007568 ORTHO05D009779 7.7e-48 194.9 244 42.6
C01p17360 Brassica napus HOM05D007568 ORTHO05D009779 2.5e-46 189.9 242 40.5
C03p86040 Brassica napus HOM05D007568 ORTHO05D009779 9.4e-46 188.0 242 40.5
A03p66080 Brassica napus HOM05D007568 ORTHO05D009779 1.8e-44 183.7 245 43.7
A05p17030 Brassica napus HOM05D007568 ORTHO05D009779 1.8e-44 183.7 245 43.7
BcaC02g08832 Brassica carinata HOM05D007568 ORTHO05D009779 5.1e-44 182.2 242 40.9
A01p06890 Brassica napus HOM05D007568 ORTHO05D009779 5.1e-44 182.2 245 43.3
A07p36520 Brassica napus HOM05D007568 ORTHO05D009779 4.8e-42 175.6 200 42.5
BcaC01g01043 Brassica carinata HOM05D007568 ORTHO05D009779 1.1e-41 174.5 208 43.3
A03p66230 Brassica napus HOM05D007568 ORTHO05D009779 5.3e-41 172.2 236 39.8
BcaB02g11011 Brassica carinata HOM05D007568 ORTHO05D009779 7.7e-40 168.3 219 39.7
BolC8t51027H Brassica oleracea HOM05D007568 ORTHO05D009779 6.5e-39 165.2 241 41.9
BcaB08g34629 Brassica carinata HOM05D007568 ORTHO05D009779 4.2e-38 162.5 250 37.6
BcaC09g50027 Brassica carinata HOM05D007568 ORTHO05D009779 2.6e-35 153.3 211 42.2
BraA03t15678Z Brassica rapa HOM05D007568 ORTHO05D009779 4.4e-35 152.5 179 41.9
BolC2t10349H Brassica oleracea HOM05D007568 ORTHO05D009779 7.4e-35 151.8 228 39.9
BcaB04g18026 Brassica carinata HOM05D007568 ORTHO05D009779 2.4e-33 146.7 181 39.8
C09p36930 Brassica napus HOM05D007568 ORTHO05D009779 2.6e-32 143.3 175 43.4
BolC9t56523H Brassica oleracea HOM05D007568 ORTHO05D009779 2.6e-32 143.3 175 43.4
C01p25160 Brassica napus HOM05D030822 ORTHO05D009779 3.5e-32 142.9 176 43.8
BolC7t45261H Brassica oleracea HOM05D007568 ORTHO05D009779 5.9e-32 142.1 176 43.2
BcaC09g50463 Brassica carinata HOM05D007568 ORTHO05D009779 3.2e-30 136.3 174 42.5
BcaC01g00913 Brassica carinata HOM05D007568 ORTHO05D009779 9.4e-30 134.8 169 39.6
BolC4t26648H Brassica oleracea HOM05D007568 ORTHO05D009779 1.8e-28 130.6 173 40.5
C03p18140 Brassica napus HOM05D007568 ORTHO05D009779 3.0e-28 129.8 147 40.8
BolC4t24150H Brassica oleracea HOM05D000353 ORTHO05D000174 6.8e-28 128.6 143 43.4
BcaB05g24631 Brassica carinata HOM05D007568 ORTHO05D009779 2.8e-26 123.2 170 38.8
C04p16590 Brassica napus HOM05D030822 ORTHO05D009779 4.8e-26 122.5 154 42.9
A04p34410 Brassica napus HOM05D007568 ORTHO05D009779 4.5e-24 115.9 245 31.4
BcaNung01428 Brassica carinata HOM05D007568 ORTHO05D009779 6.5e-23 112.1 187 36.9
A07p20380 Brassica napus HOM05D007568 ORTHO05D009779 3.2e-22 109.8 84 57.1
C03p85880 Brassica napus HOM05D007568 ORTHO05D009779 2.7e-21 106.7 155 37.4
BcaB07g30022 Brassica carinata HOM05D007568 ORTHO05D009779 8.0e-21 105.1 126 44.4
BolC6t36043H Brassica oleracea HOM05D007568 ORTHO05D009779 1.8e-20 104.0 83 53.0
C04p50500 Brassica napus HOM05D007568 ORTHO05D009779 4.0e-20 102.8 169 37.9
BolC2t11013H Brassica oleracea HOM05D007568 ORTHO05D009779 4.0e-20 102.8 174 37.4
A03p65180 Brassica napus HOM05D007568 ORTHO05D009779 6.8e-20 102.1 109 44.0
BcaC01g02309 Brassica carinata HOM05D007568 ORTHO05D009779 2.6e-19 100.1 130 40.0
BcaC05g29164 Brassica carinata HOM05D007568 ORTHO05D009779 9.8e-19 98.2 247 32.4
BcaC01g02319 Brassica carinata HOM05D007568 ORTHO05D009779 3.1e-17 93.2 130 38.5
BolC8t50060H Brassica oleracea HOM05D007568 ORTHO05D009779 2.7e-16 90.1 133 38.3
BolC5t34087H Brassica oleracea HOM05D007568 ORTHO05D009779 7.7e-16 88.6 60 65.0
AL1G55590 Arabidopsis lyrata HOM05D007965 ORTHO05D010269 1.3e-15 87.8 231 24.2
AL5G12730 Arabidopsis lyrata HOM05D007965 ORTHO05D010269 6.6e-15 85.5 226 26.5
AL8G18830 Arabidopsis lyrata HOM05D007965 ORTHO05D010269 6.6e-15 85.5 231 23.4
AL9U11480 Arabidopsis lyrata HOM05D000353 ORTHO05D011313 6.6e-15 85.5 228 25.9
A09p28960 Brassica napus HOM05D007568 ORTHO05D009779 6.6e-15 85.5 141 34.0
BolC4t23333H Brassica oleracea HOM05D007568 ORTHO05D009779 6.6e-15 85.5 142 35.2
BraA09t38460Z Brassica rapa HOM05D007568 ORTHO05D009779 6.6e-15 85.5 141 34.0
AL27U10060 Arabidopsis lyrata HOM05D007965 ORTHO05D010269 8.6e-15 85.1 231 23.8
AL2G23190 Arabidopsis lyrata HOM05D007965 ORTHO05D010269 8.6e-15 85.1 231 23.8
AL3G39070 Arabidopsis lyrata HOM05D007965 ORTHO05D010269 8.6e-15 85.1 231 23.8
AL7G11680 Arabidopsis lyrata HOM05D007965 ORTHO05D010269 8.6e-15 85.1 231 23.8
AL7G15190 Arabidopsis lyrata HOM05D007965 ORTHO05D010269 8.6e-15 85.1 231 23.8
AL7G49540 Arabidopsis lyrata HOM05D007965 ORTHO05D010269 8.6e-15 85.1 231 23.8
AL8G23600 Arabidopsis lyrata HOM05D007965 ORTHO05D010269 8.6e-15 85.1 231 23.8
AL9U11530 Arabidopsis lyrata HOM05D007965 ORTHO05D010269 8.6e-15 85.1 231 23.8
C06p20120 Brassica napus HOM05D007568 ORTHO05D009779 8.6e-15 85.1 165 30.3
AL1G50690 Arabidopsis lyrata HOM05D007965 ORTHO05D010269 1.1e-14 84.7 231 23.8
AL1G59740 Arabidopsis lyrata HOM05D007965 ORTHO05D010269 1.1e-14 84.7 231 23.8
AL2G16090 Arabidopsis lyrata HOM05D007965 ORTHO05D010269 1.1e-14 84.7 231 23.8
AL3G51030 Arabidopsis lyrata HOM05D007965 ORTHO05D010269 1.1e-14 84.7 231 23.8
AL4G20730 Arabidopsis lyrata HOM05D007965 ORTHO05D010269 1.1e-14 84.7 231 23.8
AL5G12670 Arabidopsis lyrata HOM05D007965 ORTHO05D010269 1.1e-14 84.7 231 23.8
AL5G19810 Arabidopsis lyrata HOM05D007965 ORTHO05D010269 1.1e-14 84.7 231 23.8
AL6G34510 Arabidopsis lyrata HOM05D007965 ORTHO05D010269 1.1e-14 84.7 231 23.8
AL6G41960 Arabidopsis lyrata HOM05D007965 ORTHO05D010269 1.1e-14 84.7 231 23.8
AL8G20930 Arabidopsis lyrata HOM05D007965 ORTHO05D010269 1.1e-14 84.7 231 23.8
C04p26530 Brassica napus HOM05D000353 ORTHO05D000174 1.1e-14 84.7 143 34.3
AL2G25150 Arabidopsis lyrata HOM05D007965 ORTHO05D010269 1.9e-14 84.0 231 23.8
BraA03t15576Z Brassica rapa HOM05D007568 ORTHO05D009779 1.9e-14 84.0 71 50.7
AL2G18690 Arabidopsis lyrata HOM05D007965 ORTHO05D010269 2.5e-14 83.6 220 24.5
AL2G22580 Arabidopsis lyrata HOM05D000022 ORTHO05D010269 2.5e-14 83.6 220 24.5
AL8G18160 Arabidopsis lyrata HOM05D007965 ORTHO05D010269 2.5e-14 83.6 231 23.4
AL1G50720 Arabidopsis lyrata HOM05D007965 ORTHO05D010269 3.3e-14 83.2 226 26.1
AL1G44420 Arabidopsis lyrata HOM05D007965 ORTHO05D010269 4.2e-14 82.8 231 23.4
AL3G41740 Arabidopsis lyrata HOM05D007965 ORTHO05D010269 5.5e-14 82.4 230 23.5
BcaC03g15824 Brassica carinata HOM05D000353 ORTHO05D000174 1.6e-13 80.9 241 24.9
AL7G48330 Arabidopsis lyrata HOM05D007965 ORTHO05D010269 2.1e-13 80.5 231 23.4
Carub.0016s0014 Capsella rubella HOM05D012762 ORTHO05D011313 3.6e-13 79.7 217 28.1
AL6G43510 Arabidopsis lyrata HOM05D007965 ORTHO05D010269 4.7e-13 79.3 210 25.7
AL8G17260 Arabidopsis lyrata HOM05D007965 ORTHO05D010269 4.7e-13 79.3 231 22.9
C05p33930 Brassica napus HOM05D030822 ORTHO05D099489 4.7e-13 79.3 70 55.7
A05p18670 Brassica napus HOM05D007568 ORTHO05D009779 6.1e-13 79.0 72 45.8
BolC5t34017H Brassica oleracea HOM05D000353 ORTHO05D000174 1.0e-12 78.2 241 24.9
AL2G19880 Arabidopsis lyrata HOM05D011333 ORTHO05D011313 1.4e-12 77.8 234 28.2
BcaB08g34681 Brassica carinata HOM05D009963 ORTHO05D009779 2.3e-12 77.0 113 35.4
C03p63100 Brassica napus HOM05D000353 ORTHO05D000174 2.3e-12 77.0 225 25.8
AL3G51050 Arabidopsis lyrata HOM05D007965 ORTHO05D023618 4.0e-12 76.3 231 26.0
AL5G12680 Arabidopsis lyrata HOM05D007965 ORTHO05D023618 4.0e-12 76.3 231 26.0
C02p27610 Brassica napus HOM05D000353 ORTHO05D000174 4.0e-12 76.3 241 24.5
BcaC06g33697 Brassica carinata HOM05D000353 ORTHO05D000174 5.2e-12 75.9 242 24.8
Carub.0012s0012 Capsella rubella HOM05D012762 ORTHO05D011313 8.9e-12 75.1 189 30.7
BraA02t07899Z Brassica rapa HOM05D000353 ORTHO05D000174 1.5e-11 74.3 225 26.2
A05p24570 Brassica napus HOM05D007568 ORTHO05D009779 2.6e-11 73.6 68 58.8
AL8G17270 Arabidopsis lyrata HOM05D007965 ORTHO05D023618 4.4e-11 72.8 200 27.0
AL2G23140 Arabidopsis lyrata HOM05D007965 ORTHO05D010269 9.8e-11 71.6 229 21.4
C09p17500 Brassica napus HOM05D000353 ORTHO05D000174 9.8e-11 71.6 234 24.8
BolC4t23434H Brassica oleracea HOM05D007568 ORTHO05D009779 9.8e-11 71.6 71 46.5
A01p26990 Brassica napus HOM05D000353 ORTHO05D000174 1.3e-10 71.2 241 23.7
BolC6t39887H Brassica oleracea HOM05D000353 ORTHO05D000174 1.3e-10 71.2 256 23.0
A03p30420 Brassica napus HOM05D007568 ORTHO05D009779 1.7e-10 70.9 66 48.5
BolC4t26686H Brassica oleracea HOM05D000353 ORTHO05D000174 1.7e-10 70.9 241 24.1
AL2G19900 Arabidopsis lyrata HOM05D007965 ORTHO05D010269 2.2e-10 70.5 206 25.2
AL2G22230 Arabidopsis lyrata HOM05D007965 ORTHO05D010269 2.2e-10 70.5 206 25.2
AL6G41900 Arabidopsis lyrata HOM05D007965 ORTHO05D010269 2.2e-10 70.5 206 25.2
AL7G11630 Arabidopsis lyrata HOM05D007965 ORTHO05D010269 2.2e-10 70.5 206 25.2
BcaC05g29111 Brassica carinata HOM05D000353 ORTHO05D000174 2.2e-10 70.5 206 26.2
C05p53400 Brassica napus HOM05D000353 ORTHO05D000174 2.8e-10 70.1 201 26.4
AL4G20700 Arabidopsis lyrata HOM05D007965 ORTHO05D010269 4.9e-10 69.3 226 24.8
BcaNung06627 Brassica carinata HOM05D007568 ORTHO05D009779 6.3e-10 68.9 68 44.1
C05p39980 Brassica napus HOM05D000353 ORTHO05D000174 6.3e-10 68.9 231 25.5
BolC1t05940H Brassica oleracea HOM05D007568 ORTHO05D027567 8.3e-10 68.6 88 38.6
Thhalv10027364m.g Eutrema salsugineum HOM05D000353 ORTHO05D000174 8.3e-10 68.6 227 24.2
AL1G26430 Arabidopsis lyrata HOM05D007965 ORTHO05D010269 1.1e-09 68.2 184 24.5
A09p37000 Brassica napus HOM05D000353 ORTHO05D000174 1.1e-09 68.2 239 25.1
BolC2t09050H Brassica oleracea HOM05D000353 ORTHO05D000174 1.1e-09 68.2 212 25.5
C09p23350 Brassica napus HOM05D000353 ORTHO05D000174 1.4e-09 67.8 241 23.7
C03p28750 Brassica napus HOM05D007568 ORTHO05D041881 1.8e-09 67.4 87 39.1
BolC3t15795H Brassica oleracea HOM05D007568 ORTHO05D041881 1.8e-09 67.4 87 39.1
A05p21320 Brassica napus HOM05D000353 ORTHO05D000174 3.2e-09 66.6 209 23.9
C04p18020 Brassica napus HOM05D000353 ORTHO05D000174 4.1e-09 66.2 210 22.9
C09p64200 Brassica napus HOM05D000353 ORTHO05D000174 4.1e-09 66.2 243 23.0
BolC4t23348H Brassica oleracea HOM05D000353 ORTHO05D000174 4.1e-09 66.2 210 22.9
BolC9t59257H Brassica oleracea HOM05D000353 ORTHO05D000174 4.1e-09 66.2 257 23.0
BraA05t21040Z Brassica rapa HOM05D000353 ORTHO05D000174 4.1e-09 66.2 205 24.4
BolC2t09294H Brassica oleracea HOM05D007568 ORTHO05D009779 5.4e-09 65.9 86 39.5
Carub.0006s2623 Capsella rubella HOM05D012762 ORTHO05D011313 7.0e-09 65.5 182 28.0
Thhalv10000133m.g Eutrema salsugineum HOM05D000353 ORTHO05D000174 7.0e-09 65.5 245 23.7
BraA01t02840Z Brassica rapa HOM05D000353 ORTHO05D000174 9.2e-09 65.1 200 25.0
AL2G19910 Arabidopsis lyrata HOM05D007965 ORTHO05D010269 2.0e-08 63.9 245 23.7
C01p49430 Brassica napus HOM05D007568 ORTHO05D009779 2.7e-08 63.5 102 36.3
Carub.0001s3685 Capsella rubella HOM05D012762 ORTHO05D011313 2.7e-08 63.5 188 28.7
AL5G12720 Arabidopsis lyrata HOM05D007965 ORTHO05D010269 3.5e-08 63.2 245 23.7
AL6G41910 Arabidopsis lyrata HOM05D007965 ORTHO05D010269 3.5e-08 63.2 245 23.7
BcaB05g23080 Brassica carinata HOM05D009963 ORTHO05D013780 4.5e-08 62.8 112 33.9
C03p67580 Brassica napus HOM05D007568 ORTHO05D009779 4.5e-08 62.8 55 50.9
TPR.G34836 Trifolium pratense HOM05D000096 ORTHO05D000045 7.8e-08 62.0 234 23.1
AL2G22240 Arabidopsis lyrata HOM05D007965 ORTHO05D010269 1.0e-07 61.6 245 23.7
BcaC03g15183 Brassica carinata HOM05D000353 ORTHO05D000174 1.7e-07 60.8 198 25.3
C04p22790 Brassica napus HOM05D007568 ORTHO05D027567 1.7e-07 60.8 85 35.3
C03p19550 Brassica napus HOM05D007568 ORTHO05D009779 2.3e-07 60.5 94 36.2
C04p17840 Brassica napus HOM05D007568 ORTHO05D014500 2.9e-07 60.1 111 31.5
TPR.G15973 Trifolium pratense HOM05D001685 ORTHO05D007488 2.9e-07 60.1 215 22.3
C09p49200 Brassica napus HOM05D000353 ORTHO05D000174 5.0e-07 59.3 240 22.9
BolC2t09295H Brassica oleracea HOM05D007568 ORTHO05D009779 5.0e-07 59.3 98 30.6
AL1G45320 Arabidopsis lyrata HOM05D007965 ORTHO05D010269 1.1e-06 58.2 140 27.1
AL1G55630 Arabidopsis lyrata HOM05D000353 ORTHO05D000174 1.1e-06 58.2 240 23.3
AL9U11490 Arabidopsis lyrata HOM05D007965 ORTHO05D010269 1.5e-06 57.8 240 23.8
AL2G19920 Arabidopsis lyrata HOM05D000353 ORTHO05D000174 3.3e-06 56.6 142 26.8
AL2G22250 Arabidopsis lyrata HOM05D000353 ORTHO05D000174 3.3e-06 56.6 142 26.8
AL7G11640 Arabidopsis lyrata HOM05D000353 ORTHO05D010269 4.3e-06 56.2 133 27.1
BcaB06g27257 Brassica carinata HOM05D000353 ORTHO05D000174 4.3e-06 56.2 237 21.9
AL2G22210 Arabidopsis lyrata HOM05D011333 ORTHO05D011313 5.6e-06 55.8 247 23.9
AL5G12710 Arabidopsis lyrata HOM05D000353 ORTHO05D000174 5.6e-06 55.8 142 26.1
BolC3t20878H Brassica oleracea HOM05D007568 ORTHO05D009779 5.6e-06 55.8 92 34.8
AL1G50240 Arabidopsis lyrata HOM05D007965 ORTHO05D010269 7.3e-06 55.5 163 24.5
BcaB08g35053 Brassica carinata HOM05D000353 ORTHO05D000174 7.3e-06 55.5 181 26.0
AL4G20680 Arabidopsis lyrata HOM05D011333 ORTHO05D011313 9.5e-06 55.1 247 24.3
Thhalv10028256m.g Eutrema salsugineum HOM05D000353 ORTHO05D000174 9.5e-06 55.1 126 27.0


User provided reference genes

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