Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C02p25920 Brassica napus HOM05D000171 ORTHO05D021829 3.4e-106 388.3 184 100.0
BolC2t08669H Brassica oleracea HOM05D000171 ORTHO05D000101 2.0e-95 352.4 178 95.5
BcaC03g15049 Brassica carinata HOM05D000171 ORTHO05D000101 4.3e-85 318.2 193 83.9
A02p04340 Brassica napus HOM05D000171 ORTHO05D000101 5.2e-83 311.2 163 92.6
C02p09190 Brassica napus HOM05D000171 ORTHO05D000101 1.9e-56 223.0 191 62.8
A07p32590 Brassica napus HOM05D000171 ORTHO05D000101 1.3e-52 210.3 189 59.3
BraA07t30883Z Brassica rapa HOM05D000171 ORTHO05D000101 6.2e-52 208.0 189 58.7
BcaC03g15048 Brassica carinata HOM05D000171 ORTHO05D000101 4.0e-51 205.3 189 57.1
BolC2t08668H Brassica oleracea HOM05D000171 ORTHO05D000101 4.0e-51 205.3 189 57.1
A02p04320 Brassica napus HOM05D000171 ORTHO05D000101 1.5e-50 203.4 190 60.5
BraA02t05394Z Brassica rapa HOM05D000171 ORTHO05D000101 1.5e-50 203.4 190 60.5
C02p25890 Brassica napus HOM05D000171 ORTHO05D021829 2.0e-50 203.0 190 61.1
C02p25910 Brassica napus HOM05D000171 ORTHO05D000101 2.6e-50 202.6 189 56.6
BolC2t06826H Brassica oleracea HOM05D000171 ORTHO05D021829 7.6e-50 201.1 190 58.9
A02p04330 Brassica napus HOM05D000171 ORTHO05D000101 9.9e-50 200.7 191 55.0
BolC2t06827H Brassica oleracea HOM05D000171 ORTHO05D000101 1.4e-48 196.8 189 56.1
A05p40900 Brassica napus HOM05D003760 ORTHO05D004672 1.9e-48 196.4 189 56.6
BraA02t05397Z Brassica rapa HOM05D000171 ORTHO05D021829 1.9e-48 196.4 146 73.3
C02p09150 Brassica napus HOM05D000171 ORTHO05D000101 2.4e-48 196.1 189 56.1
BraA02t05395Z Brassica rapa HOM05D000171 ORTHO05D000101 2.4e-48 196.1 191 55.5
BcaC03g13528 Brassica carinata HOM05D000171 ORTHO05D000101 4.2e-48 195.3 189 55.6
BraA05t22819Z Brassica rapa HOM05D003760 ORTHO05D004672 1.6e-47 193.4 189 56.1
A02p04310 Brassica napus HOM05D000171 ORTHO05D000101 6.7e-46 188.0 189 54.5
BraA02t05393Z Brassica rapa HOM05D000171 ORTHO05D000101 6.7e-46 188.0 189 54.5
BcaB03g15349 Brassica carinata HOM05D000171 ORTHO05D027461 4.0e-43 178.7 189 53.4
C02p25880 Brassica napus HOM05D000171 ORTHO05D027461 5.3e-35 151.8 167 52.7
BcaC03g13527 Brassica carinata HOM05D000171 ORTHO05D021829 1.9e-29 133.3 147 55.1
C02p09140 Brassica napus HOM05D000171 ORTHO05D021829 1.9e-29 133.3 147 55.1
BolC5t34655H Brassica oleracea HOM05D003760 ORTHO05D004672 6.7e-22 108.2 81 64.2
CARHR058080 Cardamine hirsuta HOM05D000171 ORTHO05D000101 6.3e-20 101.7 88 58.0
BcaC03g15047 Brassica carinata HOM05D000171 ORTHO05D000101 1.7e-17 93.6 59 76.3
BolC2t08667H Brassica oleracea HOM05D000171 ORTHO05D000101 1.7e-17 93.6 59 76.3
Sp6g28450 Schrenkiella parvula HOM05D000171 ORTHO05D000101 1.9e-16 90.1 192 34.4
AL6G26510 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 2.5e-16 89.7 70 60.0
CARHR197660 Cardamine hirsuta HOM05D000171 ORTHO05D000101 1.2e-15 87.4 99 44.4
BcaB08g36894 Brassica carinata HOM05D000171 ORTHO05D000101 4.7e-15 85.5 70 55.7
A10p23320 Brassica napus HOM05D000171 ORTHO05D000101 4.7e-15 85.5 66 59.1
BraA10t44400Z Brassica rapa HOM05D000171 ORTHO05D000101 6.1e-15 85.1 66 59.1
BcaC04g18942 Brassica carinata HOM05D000171 ORTHO05D000101 7.9e-15 84.7 66 59.1
C09p61400 Brassica napus HOM05D000171 ORTHO05D000101 7.9e-15 84.7 66 59.1
C09p61460 Brassica napus HOM05D000171 ORTHO05D000101 5.1e-14 82.0 66 57.6
AT5G15660 Arabidopsis thaliana HOM05D000171 ORTHO05D000101 6.7e-14 81.6 108 42.6
BcaB08g36892 Brassica carinata HOM05D000171 ORTHO05D000101 8.8e-14 81.3 82 50.0
BolC9t58984H Brassica oleracea HOM05D000837 ORTHO05D000101 8.8e-14 81.3 66 57.6
BolC9t58983H Brassica oleracea HOM05D000171 ORTHO05D000101 1.1e-13 80.9 69 52.2
Thhalv10019453m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 1.1e-13 80.9 190 32.6
BcaC04g18943 Brassica carinata HOM05D000171 ORTHO05D000101 9.7e-13 77.8 69 49.3
C09p61450 Brassica napus HOM05D000171 ORTHO05D000101 9.7e-13 77.8 69 49.3
Carub.0006s1381 Capsella rubella HOM05D000171 ORTHO05D000101 9.7e-13 77.8 200 33.5
AT5G15670 Arabidopsis thaliana HOM05D000171 ORTHO05D000101 1.3e-12 77.4 70 55.7
BcaB08g36896 Brassica carinata HOM05D000171 ORTHO05D000101 1.7e-12 77.0 67 53.7
BcaC03g13526 Brassica carinata HOM05D000171 ORTHO05D000101 4.8e-12 75.5 51 64.7
BraA02t05286Z Brassica rapa HOM05D000171 ORTHO05D000101 4.8e-12 75.5 88 48.9
Carub.0006s3067 Capsella rubella HOM05D000171 ORTHO05D000101 8.2e-12 74.7 70 52.9
AT4G11590 Arabidopsis thaliana HOM05D000171 ORTHO05D000101 1.8e-11 73.6 70 50.0
AL1G39230 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 3.1e-11 72.8 71 53.5
C09p61420 Brassica napus HOM05D000171 ORTHO05D000101 3.1e-11 72.8 61 52.5
AT1G26510 Arabidopsis thaliana HOM05D000171 ORTHO05D000101 4.1e-11 72.4 71 52.1
Carub.0006s1382 Capsella rubella HOM05D000171 ORTHO05D000101 4.1e-11 72.4 70 52.9
BcaC03g18442 Brassica carinata HOM05D000171 ORTHO05D000101 5.3e-11 72.0 88 48.9
C02p07900 Brassica napus HOM05D000171 ORTHO05D000101 1.6e-10 70.5 88 47.7
Thhalv10015249m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 2.0e-10 70.1 58 55.2
AT1G26515 Arabidopsis thaliana HOM05D000171 ORTHO05D000101 3.5e-10 69.3 71 50.7
AT1G31000 Arabidopsis thaliana HOM05D000171 ORTHO05D000101 4.5e-10 68.9 69 47.8
Thhalv10023891m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 2.9e-09 66.2 58 56.9
AT1G47800 Arabidopsis thaliana HOM05D000171 ORTHO05D000101 3.8e-09 65.9 68 42.6
Thhalv10015726m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 6.5e-09 65.1 76 44.7
BcaNung02197 Brassica carinata HOM05D000171 ORTHO05D000101 8.5e-09 64.7 69 49.3
BraA04t17990Z Brassica rapa HOM05D000171 ORTHO05D000101 1.1e-08 64.3 56 50.0
AL3G14200 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 1.5e-08 63.9 190 27.4
Carub.0006s1309 Capsella rubella HOM05D000171 ORTHO05D000101 1.5e-08 63.9 190 28.9
AL4G27390 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 2.5e-08 63.2 64 42.2
A04p24670 Brassica napus HOM05D000171 ORTHO05D000101 3.2e-08 62.8 64 42.2
C02p07910 Brassica napus HOM05D000171 ORTHO05D000101 3.2e-08 62.8 69 47.8
BolC2t06714H Brassica oleracea HOM05D000171 ORTHO05D000101 3.2e-08 62.8 69 47.8
THA.LOC104805854 Tarenaya hassleriana HOM05D000171 ORTHO05D000101 3.2e-08 62.8 67 50.7
BcaC01g05920 Brassica carinata HOM05D000171 ORTHO05D000101 4.2e-08 62.4 85 36.5
AL3G22290 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 5.5e-08 62.0 60 51.7
BcaNung02196 Brassica carinata HOM05D000171 ORTHO05D000101 5.5e-08 62.0 68 45.6
Aa31LG6G7120 Aethionema arabicum HOM05D000171 ORTHO05D000101 7.2e-08 61.6 194 27.3
C04p61570 Brassica napus HOM05D000171 ORTHO05D000101 7.2e-08 61.6 64 42.2
C03p21070 Brassica napus HOM05D000171 ORTHO05D000101 9.4e-08 61.2 141 25.5
BolC3t14489H Brassica oleracea HOM05D000171 ORTHO05D000101 9.4e-08 61.2 89 34.8
AT1G47810 Arabidopsis thaliana HOM05D000171 ORTHO05D000101 1.6e-07 60.5 74 40.5
BcaC02g07948 Brassica carinata HOM05D000171 ORTHO05D000101 1.6e-07 60.5 56 46.4
BcaC03g18443 Brassica carinata HOM05D000171 ORTHO05D000101 1.6e-07 60.5 69 46.4
A04p24910 Brassica napus HOM05D000171 ORTHO05D000101 1.6e-07 60.5 58 48.3
A10p30650 Brassica napus HOM05D000171 ORTHO05D000101 1.6e-07 60.5 65 46.2
BolC4t27640H Brassica oleracea HOM05D000171 ORTHO05D000101 1.6e-07 60.5 56 46.4
BraA04t17999Z Brassica rapa HOM05D000171 ORTHO05D000101 1.6e-07 60.5 58 48.3
BraA04t18005Z Brassica rapa HOM05D000171 ORTHO05D000101 1.6e-07 60.5 58 48.3
BcaC02g07953 Brassica carinata HOM05D000171 ORTHO05D000101 2.1e-07 60.1 64 43.8
Aa31LG11G13910 Aethionema arabicum HOM05D000171 ORTHO05D000101 2.7e-07 59.7 56 48.2
A04p24820 Brassica napus HOM05D000171 ORTHO05D000101 2.7e-07 59.7 58 48.3
Sp3g03510 Schrenkiella parvula HOM05D000171 ORTHO05D000101 3.6e-07 59.3 194 30.4
BcaB06g28548 Brassica carinata HOM05D000171 ORTHO05D000101 4.7e-07 58.9 68 42.6
BraA10t45106Z Brassica rapa HOM05D000171 ORTHO05D000101 4.7e-07 58.9 61 47.5
BcaC05g26732 Brassica carinata HOM05D000171 ORTHO05D000101 6.1e-07 58.5 68 48.5
Thhalv10022001m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 6.1e-07 58.5 60 43.3
Aa31sc194G10 Aethionema arabicum HOM05D000171 ORTHO05D000101 8.0e-07 58.2 77 42.9
Aa31sc2656G10 Aethionema arabicum HOM05D000171 ORTHO05D000101 8.0e-07 58.2 77 42.9
C04p61870 Brassica napus HOM05D000171 ORTHO05D000101 8.0e-07 58.2 58 48.3
BolC4t27669H Brassica oleracea HOM05D000171 ORTHO05D000101 8.0e-07 58.2 58 48.3
AL1G53500 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 1.0e-06 57.8 63 39.7
Carub.0001s3614 Capsella rubella HOM05D000171 ORTHO05D000101 1.0e-06 57.8 69 40.6
C04p61620 Brassica napus HOM05D000171 ORTHO05D000101 1.4e-06 57.4 58 50.0
BcaB04g21350 Brassica carinata HOM05D000171 ORTHO05D000101 1.8e-06 57.0 60 45.0
A04p24710 Brassica napus HOM05D000171 ORTHO05D000101 1.8e-06 57.0 56 42.9
A04p24850 Brassica napus HOM05D000171 ORTHO05D000101 1.8e-06 57.0 71 40.8
BNapus_Darmor_BZH_scaffold_78p00960 Brassica napus HOM05D000171 ORTHO05D000101 1.8e-06 57.0 68 44.1
BolC4t27646H Brassica oleracea HOM05D000171 ORTHO05D000101 1.8e-06 57.0 58 50.0
Carub.0001s3582 Capsella rubella HOM05D000171 ORTHO05D000101 1.8e-06 57.0 58 46.6
CARHR036660 Cardamine hirsuta HOM05D000171 ORTHO05D000101 1.8e-06 57.0 61 45.9
Thhalv10010425m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 1.8e-06 57.0 82 37.8
Thhalv10022230m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 1.8e-06 57.0 84 40.5
BcaC09g48467 Brassica carinata HOM05D000171 ORTHO05D000101 2.3e-06 56.6 73 46.6
C04p61790 Brassica napus HOM05D000171 ORTHO05D000101 2.3e-06 56.6 59 45.8
C04p61880 Brassica napus HOM05D000171 ORTHO05D000101 2.3e-06 56.6 58 46.6
BolC4t27662H Brassica oleracea HOM05D000171 ORTHO05D000101 2.3e-06 56.6 59 45.8
BraA02t05249Z Brassica rapa HOM05D000171 ORTHO05D000101 2.3e-06 56.6 87 39.1
BraA04t17987Z Brassica rapa HOM05D000171 ORTHO05D000101 2.3e-06 56.6 58 46.6
BraA04t18002Z Brassica rapa HOM05D000171 ORTHO05D000101 2.3e-06 56.6 71 40.8
BraA09t39335Z Brassica rapa HOM05D000171 ORTHO05D000101 2.3e-06 56.6 69 46.4
BcaB06g28593 Brassica carinata HOM05D000171 ORTHO05D000101 3.0e-06 56.2 71 40.8
BcaC05g26608 Brassica carinata HOM05D000171 ORTHO05D000101 3.0e-06 56.2 68 45.6
C05p25940 Brassica napus HOM05D000171 ORTHO05D000101 3.0e-06 56.2 68 45.6
C05p26570 Brassica napus HOM05D000171 ORTHO05D000101 3.0e-06 56.2 68 45.6
BolC9t54776H Brassica oleracea HOM05D000171 ORTHO05D000101 3.0e-06 56.2 71 42.3
THA.LOC104821034 Tarenaya hassleriana HOM05D000171 ORTHO05D000101 3.0e-06 56.2 58 48.3
AL5G26240 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 4.0e-06 55.8 71 43.7
BcaC02g07927 Brassica carinata HOM05D000171 ORTHO05D000101 4.0e-06 55.8 57 47.4
BcaC05g26729 Brassica carinata HOM05D000171 ORTHO05D000101 4.0e-06 55.8 68 45.6
C09p71110 Brassica napus HOM05D000171 ORTHO05D000101 4.0e-06 55.8 61 42.6
BolC4t27668H Brassica oleracea HOM05D000171 ORTHO05D000101 4.0e-06 55.8 57 47.4
BolC9t59874H Brassica oleracea HOM05D000171 ORTHO05D000101 4.0e-06 55.8 61 42.6
A05p13530 Brassica napus HOM05D000171 ORTHO05D000101 5.2e-06 55.5 74 32.4
C04p61610 Brassica napus HOM05D000171 ORTHO05D000101 5.2e-06 55.5 73 39.7
Carub.0004s1336 Capsella rubella HOM05D000171 ORTHO05D000101 5.2e-06 55.5 64 39.1
Carub.0005s1561 Capsella rubella HOM05D000171 ORTHO05D000101 5.2e-06 55.5 125 31.2
CARHR041530 Cardamine hirsuta HOM05D000171 ORTHO05D000101 5.2e-06 55.5 87 34.5
A02p02780 Brassica napus HOM05D000171 ORTHO05D000101 6.7e-06 55.1 87 37.9
Carub.0003s1002 Capsella rubella HOM05D000171 ORTHO05D000101 6.7e-06 55.1 60 46.7
Thhalv10022123m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 6.7e-06 55.1 43 53.5
THA.LOC104821025 Tarenaya hassleriana HOM05D000171 ORTHO05D000101 6.7e-06 55.1 58 46.6
Aa31LG11G10090 Aethionema arabicum HOM05D000171 ORTHO05D000101 8.8e-06 54.7 58 46.6
AL1G53540 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 8.8e-06 54.7 58 44.8
AT1G47790 Arabidopsis thaliana HOM05D000171 ORTHO05D000101 8.8e-06 54.7 74 41.9
AT4G38870 Arabidopsis thaliana HOM05D000171 ORTHO05D000101 8.8e-06 54.7 63 46.0
BcaB06g28421 Brassica carinata HOM05D000171 ORTHO05D000101 8.8e-06 54.7 65 44.6
BcaC07g38925 Brassica carinata HOM05D000171 ORTHO05D000101 8.8e-06 54.7 56 42.9
BcaNung05889 Brassica carinata HOM05D000171 ORTHO05D000101 8.8e-06 54.7 87 36.8
A08p30330 Brassica napus HOM05D000171 ORTHO05D000101 8.8e-06 54.7 57 45.6
BraA08t34966Z Brassica rapa HOM05D000171 ORTHO05D000101 8.8e-06 54.7 57 45.6
Carub.0001s2947 Capsella rubella HOM05D000171 ORTHO05D000101 8.8e-06 54.7 56 41.1
CARHR125110 Cardamine hirsuta HOM05D000171 ORTHO05D000101 8.8e-06 54.7 74 37.8


User provided reference genes

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