Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C02p25780 Brassica napus HOM05D007751 ORTHO05D009813 6.0e-92 340.9 179 100.0
BraA02t06621Z Brassica rapa HOM05D007751 ORTHO05D009813 6.2e-89 330.9 179 97.2
BolC2t08647H Brassica oleracea HOM05D007751 ORTHO05D009813 1.7e-78 296.2 153 99.3
A02p15600 Brassica napus HOM05D007751 ORTHO05D009813 1.3e-59 233.4 125 96.8
BolC2t08679H Brassica oleracea HOM05D007751 ORTHO05D009813 8.4e-54 214.2 187 68.4
C02p26100 Brassica napus HOM05D007751 ORTHO05D009813 2.5e-53 212.6 187 67.9
BraA02t06629Z Brassica rapa HOM05D007751 ORTHO05D009813 5.5e-53 211.5 187 67.9
A01p20050 Brassica napus HOM05D007751 ORTHO05D009813 7.1e-53 211.1 187 66.8
BraA01t01929Z Brassica rapa HOM05D007751 ORTHO05D009813 9.3e-53 210.7 185 67.0
A02p15670 Brassica napus HOM05D007751 ORTHO05D009813 1.6e-52 209.9 187 67.4
BcaC03g15060 Brassica carinata HOM05D007751 ORTHO05D009813 9.4e-45 184.1 159 66.7
BraSC37t46147Z Brassica rapa HOM05D007751 ORTHO05D009813 7.2e-29 131.3 182 42.3
Thhalv10014776m.g Eutrema salsugineum HOM05D007751 ORTHO05D009813 7.2e-29 131.3 181 43.1
A10p08560 Brassica napus HOM05D007751 ORTHO05D009813 9.4e-29 131.0 182 42.3
Carub.0008s1007 Capsella rubella HOM05D007751 ORTHO05D009813 3.6e-28 129.0 177 44.1
Sp6g11920 Schrenkiella parvula HOM05D007751 ORTHO05D009813 1.0e-27 127.5 181 44.8
AT5G50030 Arabidopsis thaliana HOM05D007751 ORTHO05D009813 6.7e-27 124.8 177 43.5
Aa31sc47G40 Aethionema arabicum HOM05D007751 ORTHO05D009813 1.1e-26 124.0 179 41.9
CARHR258630 Cardamine hirsuta HOM05D007751 ORTHO05D009813 1.1e-26 124.0 181 41.4
Sp6g11910 Schrenkiella parvula HOM05D007751 ORTHO05D009813 2.6e-26 122.9 177 45.2
AL8G24070 Arabidopsis lyrata HOM05D007751 ORTHO05D009813 3.3e-26 122.5 181 43.1
AT5G50070 Arabidopsis thaliana HOM05D007751 ORTHO05D009813 1.7e-25 120.2 180 44.4
AL8G24030 Arabidopsis lyrata HOM05D007751 ORTHO05D009813 6.3e-25 118.2 181 40.3
BolC9t56709H Brassica oleracea HOM05D007751 ORTHO05D009813 4.1e-24 115.5 166 42.8
Carub.0008s1002 Capsella rubella HOM05D007751 ORTHO05D009813 4.1e-24 115.5 178 42.1
Sp6g11860 Schrenkiella parvula HOM05D007751 ORTHO05D009813 4.1e-24 115.5 181 38.7
Carub.0008s0994 Capsella rubella HOM05D007751 ORTHO05D009813 5.3e-24 115.2 181 43.1
Thhalv10015309m.g Eutrema salsugineum HOM05D007751 ORTHO05D009813 7.7e-23 111.3 175 41.7
Carub.0008s0999 Capsella rubella HOM05D007751 ORTHO05D009813 2.2e-22 109.8 178 42.1
C03p33340 Brassica napus HOM05D007751 ORTHO05D009813 2.9e-22 109.4 177 40.7
Carub.0008s1000 Capsella rubella HOM05D007751 ORTHO05D009813 3.8e-22 109.0 177 40.1
Carub.0002s0822 Capsella rubella HOM05D007751 ORTHO05D009813 5.0e-22 108.6 182 40.7
Carub.0008s0995 Capsella rubella HOM05D007751 ORTHO05D009813 1.5e-21 107.1 177 41.8
AL8G24060 Arabidopsis lyrata HOM05D007751 ORTHO05D009813 1.9e-21 106.7 180 41.1
AT5G50040 Arabidopsis thaliana HOM05D007751 ORTHO05D009813 4.2e-21 105.5 177 40.7
A04p13370 Brassica napus HOM05D007751 ORTHO05D009813 5.5e-21 105.1 177 40.7
Carub.0008s1001 Capsella rubella HOM05D007751 ORTHO05D009813 5.5e-21 105.1 176 40.3
BcaC01g04833 Brassica carinata HOM05D007751 ORTHO05D009813 9.4e-21 104.4 177 39.5
BraA04t16992Z Brassica rapa HOM05D007751 ORTHO05D009813 9.4e-21 104.4 177 40.1
C04p47120 Brassica napus HOM05D007751 ORTHO05D009813 1.6e-20 103.6 177 40.1
Aa31sc47G80 Aethionema arabicum HOM05D007751 ORTHO05D009813 2.7e-20 102.8 157 36.9
BolC4t26306H Brassica oleracea HOM05D007751 ORTHO05D009813 2.7e-20 102.8 177 39.5
BraA03t10746Z Brassica rapa HOM05D007751 ORTHO05D009813 3.6e-20 102.4 177 40.1
C03p16960 Brassica napus HOM05D007751 ORTHO05D009813 1.8e-19 100.1 177 40.1
Carub.0008s0996 Capsella rubella HOM05D007751 ORTHO05D009813 1.8e-19 100.1 177 39.5
A03p14510 Brassica napus HOM05D007751 ORTHO05D009813 2.3e-19 99.8 177 39.5
AL8G24050 Arabidopsis lyrata HOM05D007751 ORTHO05D009813 3.0e-19 99.4 165 41.2
AT1G54980 Arabidopsis thaliana HOM05D007751 ORTHO05D009813 4.0e-19 99.0 169 40.2
BcaB01g04307 Brassica carinata HOM05D007751 ORTHO05D009813 5.2e-19 98.6 177 39.0
BcaC01g06316 Brassica carinata HOM05D007751 ORTHO05D009813 5.2e-19 98.6 177 39.0
BolC3t14109H Brassica oleracea HOM05D007751 ORTHO05D009813 5.2e-19 98.6 177 39.0
CARHR284460 Cardamine hirsuta HOM05D007751 ORTHO05D009813 6.8e-19 98.2 178 38.2
Sp6g11880 Schrenkiella parvula HOM05D007751 ORTHO05D009813 8.8e-19 97.8 177 39.5
CARHR257930 Cardamine hirsuta HOM05D007751 ORTHO05D009813 1.2e-18 97.4 174 37.9
AL8G24040 Arabidopsis lyrata HOM05D007751 ORTHO05D009813 1.5e-18 97.1 181 39.8
Carub.0008s0998 Capsella rubella HOM05D007751 ORTHO05D009813 2.6e-18 96.3 180 37.2
CARHR258610 Cardamine hirsuta HOM05D007751 ORTHO05D009813 2.8e-17 92.8 177 37.9
Carub.0002s0821 Capsella rubella HOM05D007751 ORTHO05D009813 4.8e-17 92.0 182 39.0
Carub.0008s0997 Capsella rubella HOM05D007751 ORTHO05D009813 6.3e-17 91.7 177 35.6
AT5G50060 Arabidopsis thaliana HOM05D007751 ORTHO05D009813 1.1e-16 90.9 162 40.1
AL7G28560 Arabidopsis lyrata HOM05D007751 ORTHO05D009813 4.1e-16 89.0 181 31.5
AT4G24640 Arabidopsis thaliana HOM05D007751 ORTHO05D009813 4.1e-16 89.0 181 32.0
AL1G65530 Arabidopsis lyrata HOM05D007751 ORTHO05D009813 1.6e-15 87.0 134 41.0
Carub.0007s1642 Capsella rubella HOM05D007751 ORTHO05D009813 1.6e-15 87.0 181 30.9
Thhalv10026329m.g Eutrema salsugineum HOM05D007751 ORTHO05D009813 5.9e-15 85.1 180 32.8
AT5G50050 Arabidopsis thaliana HOM05D007751 ORTHO05D009813 1.7e-14 83.6 181 36.5
THA.LOC104799810 Tarenaya hassleriana HOM05D007751 ORTHO05D009813 3.8e-14 82.4 183 34.4
Aa31sc47G50 Aethionema arabicum HOM05D007751 ORTHO05D009813 5.5e-13 78.6 180 31.7
C09p38520 Brassica napus HOM05D007751 ORTHO05D009813 9.4e-13 77.8 127 37.8
Sp7g22630 Schrenkiella parvula HOM05D007751 ORTHO05D009813 2.1e-12 76.6 181 28.2
CARHR232030 Cardamine hirsuta HOM05D007751 ORTHO05D009813 3.6e-12 75.9 181 27.6
THA.LOC104800050 Tarenaya hassleriana HOM05D007751 ORTHO05D009813 6.1e-12 75.1 171 31.6
CARHR258620 Cardamine hirsuta HOM05D007751 ORTHO05D009813 3.0e-11 72.8 175 35.4
Carub.0008s1005 Capsella rubella HOM05D007751 ORTHO05D009813 5.7e-10 68.6 184 31.5
Carub.0008s1006 Capsella rubella HOM05D007751 ORTHO05D009813 2.2e-09 66.6 184 31.0
BcaC07g38163 Brassica carinata HOM05D007751 ORTHO05D009813 9.1e-08 61.2 106 35.8
Aa31LG4G9710 Aethionema arabicum HOM05D007751 ORTHO05D009813 2.0e-07 60.1 113 32.7
Prupe.8G038100 Prunus persica HOM05D004894 ORTHO05D005689 2.7e-07 59.7 131 32.8
BolC8t48582H Brassica oleracea HOM05D007751 ORTHO05D009813 7.7e-07 58.2 105 35.2
MD10G1032600 Malus domestica HOM05D004894 ORTHO05D005689 1.0e-06 57.8 139 33.1
Carub.0002s0820 Capsella rubella HOM05D007751 ORTHO05D009813 1.7e-06 57.0 177 29.9
Cpa.g.sc49.90 Carica papaya HOM05D007679 ORTHO05D009560 1.7e-06 57.0 140 33.6
Manes.02G182301 Manihot esculenta HOM05D004894 ORTHO05D005689 1.7e-06 57.0 143 28.0
Carub.0008s1003 Capsella rubella HOM05D007751 ORTHO05D009813 6.6e-06 55.1 182 29.7


User provided reference genes

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