Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C02p25770 Brassica napus HOM05D004844 ORTHO05D006036 9.6e-50 199.9 104 100.0
BolC2t08646H Brassica oleracea HOM05D004844 ORTHO05D006036 1.1e-48 196.4 104 98.1
BcaC03g15030 Brassica carinata HOM05D004844 ORTHO05D006036 2.1e-41 172.2 92 96.7
C02p25790 Brassica napus HOM05D004844 ORTHO05D006036 1.1e-40 169.9 92 95.7
A02p15610 Brassica napus HOM05D004844 ORTHO05D006036 4.0e-40 167.9 92 94.6
BraA02t06622Z Brassica rapa HOM05D004844 ORTHO05D006036 4.0e-40 167.9 92 94.6
BolC2t08648H Brassica oleracea HOM05D004844 ORTHO05D006036 5.3e-40 167.5 92 94.6
Aa31LG7G8740 Aethionema arabicum HOM05D004844 ORTHO05D006036 8.1e-33 143.7 92 78.3
AL2G28120 Arabidopsis lyrata HOM05D004844 ORTHO05D006036 3.1e-32 141.7 90 80.0
Carub.0002s1569 Capsella rubella HOM05D004844 ORTHO05D006036 1.2e-31 139.8 90 77.8
Sp5g24170 Schrenkiella parvula HOM05D004844 ORTHO05D006036 1.2e-31 139.8 92 80.4
Thhalv10018096m.g Eutrema salsugineum HOM05D004844 ORTHO05D006036 5.8e-31 137.5 92 81.5
AT1G69070 Arabidopsis thaliana HOM05D004844 ORTHO05D006036 2.5e-29 132.1 90 75.6
THA.LOC104821991 Tarenaya hassleriana HOM05D004844 ORTHO05D006036 3.5e-28 128.3 90 68.9
Migut.E00244 Erythranthe guttata HOM05D004844 ORTHO05D006036 3.9e-27 124.8 90 71.1
CARHR061950 Cardamine hirsuta HOM05D004844 ORTHO05D006036 5.1e-27 124.4 90 68.9
Lj6A775T24 Lonicera japonica HOM05D004844 ORTHO05D006036 1.6e-25 119.4 90 65.6
FvH4_4g29570 Fragaria vesca HOM05D004844 ORTHO05D006036 2.8e-25 118.6 89 66.3
FAN07G0902 Fragaria x ananassa HOM05D004844 ORTHO05D006036 2.8e-25 118.6 89 66.3
FAN12G1456 Fragaria x ananassa HOM05D004844 ORTHO05D006036 2.8e-25 118.6 89 66.3
FAN17G0509 Fragaria x ananassa HOM05D004844 ORTHO05D006036 6.2e-25 117.5 89 65.2
Sabra10G0108200 Salix brachista HOM05D004844 ORTHO05D006036 8.2e-25 117.1 90 66.7
Cfa008853 Carpinus fangiana HOM05D004844 ORTHO05D006036 1.1e-24 116.7 90 65.6
Solyc05g011990.4 Solanum lycopersicum HOM05D004844 ORTHO05D006036 1.4e-24 116.3 90 64.4
Sopen05g006740 Solanum pennellii HOM05D004844 ORTHO05D006036 1.4e-24 116.3 90 64.4
PGSC0003DMG400028356 Solanum tuberosum HOM05D004844 ORTHO05D006036 1.4e-24 116.3 90 64.4
ATR0827G008 Amborella trichopoda HOM05D004844 ORTHO05D006036 1.8e-24 115.9 91 64.8
FAN22G0359 Fragaria x ananassa HOM05D004844 ORTHO05D006036 1.8e-24 115.9 89 65.2
Sed0010809 Sechium edule HOM05D004844 ORTHO05D006036 2.4e-24 115.5 90 65.6
SGA_v2.0_scaffold287G47183 Striga asiatica HOM05D004844 ORTHO05D006036 3.1e-24 115.2 90 64.4
RcHm_v2.0_Chr4g0437801 Rosa chinensis HOM05D004844 ORTHO05D006036 4.1e-24 114.8 89 62.9
Os03g0598200 Oryza sativa ssp. japonica HOM05D004844 ORTHO05D006036 6.9e-24 114.0 92 65.2
Nn4g23518 Nelumbo nucifera HOM05D004844 ORTHO05D006036 1.5e-23 112.8 92 66.3
Eucgr.B03138 Eucalyptus grandis HOM05D004844 ORTHO05D006036 2.0e-23 112.5 88 63.6
Phvul.007G274500 Phaseolus vulgaris HOM05D004844 ORTHO05D006036 2.0e-23 112.5 92 64.1
VMungo0720G2226 Vigna mungo HOM05D004844 ORTHO05D006036 2.0e-23 112.5 92 63.0
GSVIVG01012255001 Vitis vinifera HOM05D004844 ORTHO05D006036 2.0e-23 112.5 92 64.1
Nitab4.5_0011617g0010 Nicotiana tabacum HOM05D004844 ORTHO05D006036 2.6e-23 112.1 92 64.1
Cpa.g.sc1.164 Carica papaya HOM05D004844 ORTHO05D006036 3.4e-23 111.7 88 62.5
MBI19_g00156_MAGBIO Magnolia biondii HOM05D004844 ORTHO05D006036 3.4e-23 111.7 92 60.9
MD16G1058200 Malus domestica HOM05D004844 ORTHO05D006036 3.4e-23 111.7 90 61.1
PGR102G1068 Punica granatum HOM05D004844 ORTHO05D006036 4.5e-23 111.3 92 64.1
Glyma.10G005700 Glycine max HOM05D004844 ORTHO05D006036 5.8e-23 110.9 92 62.0
Nitab4.5_0000027g0110 Nicotiana tabacum HOM05D004844 ORTHO05D006036 5.8e-23 110.9 92 63.0
Actinidia19906 Actinidia chinensis HOM05D004844 ORTHO05D006036 7.6e-23 110.5 89 62.9
arahy.Tifrunner.gnm1.ann1.79UB1D Arachis hypogaea HOM05D004844 ORTHO05D006036 7.6e-23 110.5 92 62.0
arahy.Tifrunner.gnm1.ann1.Q1MRHA Arachis hypogaea HOM05D004844 ORTHO05D006036 7.6e-23 110.5 92 62.0
CDE10G1236 Ceratophyllum demersum HOM05D004844 ORTHO05D006036 7.6e-23 110.5 88 64.8
Potri.010G140100 Populus trichocarpa HOM05D004844 ORTHO05D006036 7.6e-23 110.5 90 63.3
TWI79G0207 Tripterygium wilfordii HOM05D004844 ORTHO05D006036 7.6e-23 110.5 88 64.8
CSS0013036 Camellia sinensis var. sinensis HOM05D004844 ORTHO05D006036 1.0e-22 110.2 92 63.0
CANSAT64G2735 Cannabis sativa HOM05D004844 ORTHO05D006036 1.0e-22 110.2 87 63.2
Ciclev10030646m.g Citrus clementina HOM05D004844 ORTHO05D006036 1.0e-22 110.2 88 63.6
Glyma.02G003100 Glycine max HOM05D004844 ORTHO05D006036 1.0e-22 110.2 92 60.9
Ca_12009_v3 Cicer arietinum L. HOM05D004844 ORTHO05D006036 1.3e-22 109.8 88 62.5
arahy.Tifrunner.gnm1.ann1.H7MRPA Arachis hypogaea HOM05D004844 ORTHO05D006036 1.7e-22 109.4 92 60.9
Psat1g047040 Pisum sativum HOM05D004844 ORTHO05D006036 2.2e-22 109.0 92 63.0
MSTRG.13461 Avicennia marina HOM05D004844 ORTHO05D006036 2.9e-22 108.6 92 62.0
Glyma.18G236233 Glycine max HOM05D004844 ORTHO05D006036 2.9e-22 108.6 92 60.9
EL10Ac6g14694 Beta vulgaris HOM05D004844 ORTHO05D006036 3.8e-22 108.2 92 63.0
Cc11_g11690 Coffea canephora HOM05D004844 ORTHO05D006036 3.8e-22 108.2 92 64.1
Lj6g0000403 Lotus japonicus HOM05D004844 ORTHO05D006036 3.8e-22 108.2 84 63.1
Sc04g0007400 Simmondsia chinensis HOM05D004844 ORTHO05D006036 3.8e-22 108.2 92 60.9
TAR627G0787 Trochodendron aralioides HOM05D004844 ORTHO05D006036 3.8e-22 108.2 92 63.0
Medtr1g064300 Medicago truncatula HOM05D004844 ORTHO05D006036 5.0e-22 107.8 92 60.9
Medtr1g442830 Medicago truncatula HOM05D004844 ORTHO05D006036 5.0e-22 107.8 92 60.9
DCAR_022184 Daucus carota HOM05D004844 ORTHO05D006036 6.5e-22 107.5 82 67.1
CAN.G1021.26 Capsicum annuum HOM05D004844 ORTHO05D006036 8.4e-22 107.1 92 62.0
Thecc.02G325500 Theobroma cacao HOM05D004844 ORTHO05D006036 8.4e-22 107.1 92 60.9
Duzib251G0783 Durio zibethinus HOM05D004844 ORTHO05D006036 1.1e-21 106.7 92 59.8
Aqoxy3G03719 Aquilegia oxysepala HOM05D004844 ORTHO05D006036 1.4e-21 106.3 92 60.9
Rhsim12G0073500 Rhododendron simsii HOM05D004844 ORTHO05D006036 1.4e-21 106.3 92 63.0
Pp3c13_7740 Physcomitrium patens HOM05D004844 ORTHO05D006036 2.5e-21 105.5 90 57.8
COL.COLO4_27840 Corchorus olitorius HOM05D004844 ORTHO05D006036 3.2e-21 105.1 92 62.0
Nitab4.5_0000027g0130 Nicotiana tabacum HOM05D004844 ORTHO05D006036 3.2e-21 105.1 88 60.2
Zm00001eb049910 Zea mays HOM05D004844 ORTHO05D006036 3.2e-21 105.1 90 58.9
Atru.BG.298.p Acer truncatum HOM05D004844 ORTHO05D006036 5.5e-21 104.4 90 63.3
AUR62003071 Chenopodium quinoa HOM05D004844 ORTHO05D006036 5.5e-21 104.4 92 60.9
Oeu019000.3 Olea europaea HOM05D004844 ORTHO05D006036 5.5e-21 104.4 92 62.0
SalBow4G3252 Salvia bowleyana HOM05D004844 ORTHO05D006036 5.5e-21 104.4 92 60.9
AUR62007885 Chenopodium quinoa HOM05D004844 ORTHO05D006036 7.2e-21 104.0 92 60.9
SEGI_13774 Sequoiadendron giganteum HOM05D004844 ORTHO05D006036 7.2e-21 104.0 83 61.4
Mapoly0013s0047 Marchantia polymorpha HOM05D004844 ORTHO05D006036 9.3e-21 103.6 89 58.4
Ah.03g138670 Amaranthus hybridus HOM05D004844 ORTHO05D006036 1.2e-20 103.2 89 59.6
ClCG08G010550 Citrullus lanatus HOM05D004844 ORTHO05D006036 1.2e-20 103.2 88 56.8
Gohir.D04G190100 Gossypium hirsutum HOM05D004844 ORTHO05D006036 1.2e-20 103.2 92 58.7
Gorai.012G185400 Gossypium raimondii HOM05D004844 ORTHO05D006036 1.2e-20 103.2 92 58.7
Manes.17G024283 Manihot esculenta HOM05D004844 ORTHO05D006036 2.1e-20 102.4 89 59.6
Gohir.A04G145600 Gossypium hirsutum HOM05D004844 ORTHO05D006036 2.7e-20 102.1 92 57.6
CsaV3_6G033830 Cucumis sativus L. HOM05D004844 ORTHO05D006036 3.5e-20 101.7 88 56.8
HanXRQChr06g0168931 Helianthus annuus HOM05D004844 ORTHO05D006036 3.5e-20 101.7 92 57.6
Lsat_1_v5_gn_8_35620 Lactuca sativa HOM05D004844 ORTHO05D006036 3.5e-20 101.7 92 58.7
Lalb_Chr25g0284481 Lupinus albus HOM05D004844 ORTHO05D006036 3.5e-20 101.7 87 56.3
Prupe.1G290900 Prunus persica HOM05D004844 ORTHO05D006036 3.5e-20 101.7 92 59.8
HPP92_012262 Vanilla planifolia HOM05D004844 ORTHO05D008684 7.9e-20 100.5 80 63.8
MELO3C011408.2 Cucumis melo HOM05D004844 ORTHO05D006036 1.0e-19 100.1 88 55.7
Peaxi162Scf00175g00927 Petunia axillaris HOM05D004844 ORTHO05D006036 1.0e-19 100.1 74 66.2
TAR623G1540 Trochodendron aralioides HOM05D004844 ORTHO05D006036 1.0e-19 100.1 93 62.4
ECA233G1780 Erigeron canadensis HOM05D004844 ORTHO05D006036 1.3e-19 99.8 90 56.7
unitig_62.g23699 Utricularia gibba HOM05D004844 ORTHO05D006036 1.8e-19 99.4 91 60.4
CBR_g4135 Chara braunii HOM05D004844 ORTHO05D006036 2.3e-19 99.0 90 56.7
PSO063G4789 Papaver somniferum HOM05D004844 ORTHO05D006036 2.3e-19 99.0 89 58.4
PSO782G4088 Papaver somniferum HOM05D004844 ORTHO05D006036 2.3e-19 99.0 89 58.4
AagrBONN_evm.TU.Sc2ySwM_228.4292 Anthoceros agrestis HOM05D004844 ORTHO05D006036 1.1e-18 96.7 88 55.7
TPR.G25170 Trifolium pratense HOM05D004844 ORTHO05D006036 2.2e-17 92.4 92 54.3
MD13G1058800 Malus domestica HOM05D004844 ORTHO05D006036 1.3e-14 83.2 71 60.6
SEGI_15727 Sequoiadendron giganteum HOM05D004844 ORTHO05D006036 7.2e-13 77.4 79 55.7
RcHm_v2.0_Chr1g0340811 Rosa chinensis HOM05D004844 ORTHO05D006036 2.0e-10 69.3 59 54.2
Cre06.g260850 Chlamydomonas reinhardtii HOM05D004844 ORTHO05D006036 7.4e-10 67.4 92 42.4
PRCOL_00006390 Prasinoderma coloniale HOM05D004844 ORTHO05D006036 3.4e-07 58.5 85 36.5
Dinv20143 Davidia involucrata HOM05D004844 ORTHO05D006036 1.7e-06 56.2 43 58.1
SEGI_23631 Sequoiadendron giganteum HOM05D004844 ORTHO05D006036 2.2e-06 55.8 49 65.3


User provided reference genes

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