Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A02p15590 Brassica napus HOM05D008249 ORTHO05D010427 8.2e-48 193.4 95 100.0
C02p25760 Brassica napus HOM05D008249 ORTHO05D010427 8.2e-48 193.4 95 100.0
BolC2t08645H Brassica oleracea HOM05D008249 ORTHO05D010427 8.2e-48 193.4 95 100.0
BraA02t06620Z Brassica rapa HOM05D008249 ORTHO05D010427 8.2e-48 193.4 95 100.0
AT1G69050 Arabidopsis thaliana HOM05D008249 ORTHO05D010427 3.7e-40 167.9 95 85.3
AL2G28100 Arabidopsis lyrata HOM05D008249 ORTHO05D010427 6.9e-39 163.7 95 83.2
BcaC03g15029 Brassica carinata HOM05D008249 ORTHO05D010427 5.9e-38 160.6 80 100.0
Thhalv10019523m.g Eutrema salsugineum HOM05D008249 ORTHO05D010427 5.5e-36 154.1 96 81.2
BolC6t38825H Brassica oleracea HOM05D008249 ORTHO05D010427 9.4e-36 153.3 95 83.2
BraA07t30800Z Brassica rapa HOM05D008249 ORTHO05D010427 1.6e-35 152.5 95 82.1
BraA07t31135Z Brassica rapa HOM05D008249 ORTHO05D010427 1.6e-35 152.5 96 80.2
BcaC08g46348 Brassica carinata HOM05D008249 ORTHO05D010427 2.1e-35 152.1 96 80.2
BcaC08g46347 Brassica carinata HOM05D008249 ORTHO05D010427 4.7e-35 151.0 96 81.2
A07p35440 Brassica napus HOM05D008249 ORTHO05D010427 4.7e-35 151.0 96 79.2
BolC6t39354H Brassica oleracea HOM05D008249 ORTHO05D010427 4.7e-35 151.0 96 81.2
A07p31730 Brassica napus HOM05D008249 ORTHO05D010427 7.9e-35 150.2 95 81.1
BcaB03g15456 Brassica carinata HOM05D008249 ORTHO05D010427 1.4e-34 149.4 95 80.0
Carub.0002s1567 Capsella rubella HOM05D008249 ORTHO05D010427 2.0e-33 145.6 99 78.8
BcaC08g45919 Brassica carinata HOM05D008249 ORTHO05D010427 2.6e-33 145.2 95 80.0
C06p37200 Brassica napus HOM05D008249 ORTHO05D010427 2.6e-33 145.2 95 80.0
BcaB03g15873 Brassica carinata HOM05D008249 ORTHO05D010427 4.7e-27 124.4 74 82.4
CARHR061920 Cardamine hirsuta HOM05D008249 ORTHO05D010427 1.8e-26 122.5 100 66.0
Aa31LG4G11760 Aethionema arabicum HOM05D008249 ORTHO05D010427 3.3e-25 118.2 91 69.2
THA.LOC104822892 Tarenaya hassleriana HOM05D008249 ORTHO05D010427 1.5e-20 102.8 96 57.3
Sp5g24160 Schrenkiella parvula HOM05D005042 ORTHO05D006080 4.2e-20 101.3 47 95.7
THA.LOC109116338 Tarenaya hassleriana HOM05D008249 ORTHO05D010427 2.7e-19 98.6 109 51.4
Manes.01G024800 Manihot esculenta HOM05D008249 ORTHO05D010427 1.3e-08 63.2 95 42.1
Haze_11870 Corylus avellana HOM05D008249 ORTHO05D010427 2.8e-08 62.0 85 51.8
Potri.008G109150 Populus trichocarpa HOM05D008249 ORTHO05D010427 2.8e-08 62.0 78 46.2
Potri.T139662 Populus trichocarpa HOM05D008249 ORTHO05D010427 2.8e-08 62.0 78 46.2
Potri.010G138700 Populus trichocarpa HOM05D008249 ORTHO05D010427 6.3e-08 60.8 85 49.4
VMungo1215G0100 Vigna mungo HOM05D008249 ORTHO05D010427 5.4e-07 57.8 80 47.5
CiPaw.05G122300 Carya illinoinensis HOM05D008249 ORTHO05D010427 7.0e-07 57.4 88 50.0
Manes.05G112900 Manihot esculenta HOM05D008249 ORTHO05D010427 7.0e-07 57.4 93 43.0
Prupe.1G293000 Prunus persica HOM05D008249 ORTHO05D010427 7.0e-07 57.4 82 48.8
RcHm_v2.0_Chr4g0437411 Rosa chinensis HOM05D008249 ORTHO05D010427 7.0e-07 57.4 86 45.3
Sabra10G0107000 Salix brachista HOM05D008249 ORTHO05D010427 9.2e-07 57.0 85 48.2
ClCG08G010570 Citrullus lanatus HOM05D008249 ORTHO05D010427 1.2e-06 56.6 86 50.0
COL.COLO4_27817 Corchorus olitorius HOM05D008249 ORTHO05D010427 2.0e-06 55.8 100 41.0
Actinidia13403 Actinidia chinensis HOM05D000485 ORTHO05D000341 4.5e-06 54.7 88 44.3
Gorai.005G147300 Gossypium raimondii HOM05D008249 ORTHO05D010427 5.9e-06 54.3 101 42.6
Ciclev10033881m.g Citrus clementina HOM05D008249 ORTHO05D010427 7.8e-06 53.9 107 41.1
Gohir.D02G131400 Gossypium hirsutum HOM05D008249 ORTHO05D010427 7.8e-06 53.9 101 42.6


User provided reference genes

Program Settings