Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C02p25670 Brassica napus HOM05D003602 ORTHO05D018547 6.5e-108 394.0 195 100.0
BcaC03g15021 Brassica carinata HOM05D003602 ORTHO05D018547 2.7e-98 362.1 183 97.3
AL4G45940 Arabidopsis lyrata HOM05D003602 ORTHO05D004808 3.1e-33 146.0 206 43.7
AT2G46520 Arabidopsis thaliana HOM05D003602 ORTHO05D004808 2.0e-32 143.3 206 42.7
Carub.0004s2923 Capsella rubella HOM05D003602 ORTHO05D004808 2.6e-32 142.9 206 42.2
CARHR141850 Cardamine hirsuta HOM05D003602 ORTHO05D004808 2.4e-30 136.3 206 40.3
Aa31LG1G27870 Aethionema arabicum HOM05D003602 ORTHO05D004808 4.2e-30 135.6 206 39.3
vmacro07844 Vaccinium macrocarpon HOM05D003602 ORTHO05D004808 5.4e-30 135.2 204 38.7
Cpa.g.sc18.79 Carica papaya HOM05D003602 ORTHO05D004808 7.1e-30 134.8 204 40.2
THA.LOC104817368 Tarenaya hassleriana HOM05D003602 ORTHO05D004808 9.3e-30 134.4 204 40.2
Sp4g28560 Schrenkiella parvula HOM05D003602 ORTHO05D004808 2.7e-29 132.9 206 39.8
BcaC02g12682 Brassica carinata HOM05D003602 ORTHO05D004808 4.6e-29 132.1 202 39.1
Lalb_Chr04g0254381 Lupinus albus HOM05D003602 ORTHO05D004808 4.6e-29 132.1 201 37.8
Actinidia17298 Actinidia chinensis HOM05D003602 ORTHO05D004808 6.0e-29 131.7 199 39.2
Thhalv10001293m.g Eutrema salsugineum HOM05D003602 ORTHO05D004808 6.0e-29 131.7 201 39.8
Eucgr.D02383 Eucalyptus grandis HOM05D003602 ORTHO05D004808 7.8e-29 131.3 199 40.2
Duzib133G0673 Durio zibethinus HOM05D003602 ORTHO05D004808 1.3e-28 130.6 204 38.2
Gohir.D07G142200 Gossypium hirsutum HOM05D003602 ORTHO05D004808 1.3e-28 130.6 201 39.8
Gorai.001G154000 Gossypium raimondii HOM05D003602 ORTHO05D004808 1.3e-28 130.6 201 39.8
Lalb_Chr17g0342751 Lupinus albus HOM05D003602 ORTHO05D004808 1.3e-28 130.6 206 36.9
Glyma.07G054900 Glycine max HOM05D003602 ORTHO05D004808 1.7e-28 130.2 204 37.3
Gohir.A07G137000 Gossypium hirsutum HOM05D003602 ORTHO05D004808 1.7e-28 130.2 201 39.8
Hma1.2p1_0390F.1_g142640 Hydrangea macrophylla HOM05D003602 ORTHO05D004808 2.3e-28 129.8 202 40.1
Thecc.01G340800 Theobroma cacao HOM05D003602 ORTHO05D004808 2.3e-28 129.8 204 39.2
DCAR_008665 Daucus carota HOM05D003602 ORTHO05D004808 3.0e-28 129.4 204 37.7
Dinv34217 Davidia involucrata HOM05D003602 ORTHO05D004808 3.0e-28 129.4 204 40.2
SalBow3G0266 Salvia bowleyana HOM05D003602 ORTHO05D004808 3.9e-28 129.0 201 38.8
TWI59G0599 Tripterygium wilfordii HOM05D003602 ORTHO05D004808 3.9e-28 129.0 201 39.3
Glyma.16G023700 Glycine max HOM05D003602 ORTHO05D004808 5.1e-28 128.6 204 36.8
PGR042G2389 Punica granatum HOM05D003602 ORTHO05D004808 5.1e-28 128.6 201 40.8
Sabra02G0140500 Salix brachista HOM05D003602 ORTHO05D004808 8.7e-28 127.9 199 40.2
C04p01410 Brassica napus HOM05D003602 ORTHO05D004808 1.1e-27 127.5 203 37.4
A05p01280 Brassica napus HOM05D003602 ORTHO05D004808 1.5e-27 127.1 203 37.4
BolC4t21795H Brassica oleracea HOM05D003602 ORTHO05D004808 1.5e-27 127.1 196 38.3
BraA05t19126Z Brassica rapa HOM05D003602 ORTHO05D004808 1.5e-27 127.1 203 37.4
CsaV3_3G007970 Cucumis sativus L. HOM05D003602 ORTHO05D004808 1.5e-27 127.1 199 39.7
Manes.01G245400 Manihot esculenta HOM05D003602 ORTHO05D004808 1.5e-27 127.1 201 39.3
CSS0032390 Camellia sinensis var. sinensis HOM05D003602 ORTHO05D004808 1.9e-27 126.7 204 37.3
Manes.05G021800 Manihot esculenta HOM05D003602 ORTHO05D004808 1.9e-27 126.7 201 38.8
Nn1g00272 Nelumbo nucifera HOM05D003602 ORTHO05D004808 1.9e-27 126.7 204 37.7
TAR371G1016 Trochodendron aralioides HOM05D003602 ORTHO05D004808 1.9e-27 126.7 201 40.3
MELO3C006015.2 Cucumis melo HOM05D003602 ORTHO05D004808 4.3e-27 125.6 199 39.7
Rhsim03G0025100 Rhododendron simsii HOM05D003602 ORTHO05D004808 5.6e-27 125.2 204 36.8
ClCG05G000750 Citrullus lanatus HOM05D003602 ORTHO05D004808 9.6e-27 124.4 202 38.6
Duzib138G1559 Durio zibethinus HOM05D003602 ORTHO05D004808 1.3e-26 124.0 201 37.8
Ciclev10018709m.g Citrus clementina HOM05D003602 ORTHO05D004808 1.6e-26 123.6 199 39.2
Potri.002G172700 Populus trichocarpa HOM05D003602 ORTHO05D004808 1.6e-26 123.6 200 40.0
arahy.Tifrunner.gnm1.ann1.M38EY0 Arachis hypogaea HOM05D003602 ORTHO05D004808 2.1e-26 123.2 201 37.8
VMungo0540G0473 Vigna mungo HOM05D003602 ORTHO05D004808 2.1e-26 123.2 201 38.3
arahy.Tifrunner.gnm1.ann1.100NT6 Arachis hypogaea HOM05D003602 ORTHO05D004808 2.8e-26 122.9 201 37.8
Sed0018077 Sechium edule HOM05D003602 ORTHO05D004808 2.8e-26 122.9 199 39.2
SGA_v2.0_scaffold22G09976 Striga asiatica HOM05D003602 ORTHO05D004808 2.8e-26 122.9 201 39.3
COL.COLO4_06273 Corchorus olitorius HOM05D003602 ORTHO05D004808 3.6e-26 122.5 205 36.6
Lj7P499T29 Lonicera japonica HOM05D003602 ORTHO05D004808 3.6e-26 122.5 204 37.3
Sed0022447 Sechium edule HOM05D003602 ORTHO05D004808 6.2e-26 121.7 199 39.7
Migut.N01537 Erythranthe guttata HOM05D003602 ORTHO05D004808 8.1e-26 121.3 201 37.8
SalBow2G0371 Salvia bowleyana HOM05D003602 ORTHO05D004808 8.1e-26 121.3 202 38.1
Sc02g0002440 Simmondsia chinensis HOM05D003602 ORTHO05D004808 8.1e-26 121.3 195 39.5
Sc02g0002490 Simmondsia chinensis HOM05D003602 ORTHO05D004808 8.1e-26 121.3 195 39.5
MSTRG.17352 Avicennia marina HOM05D003602 ORTHO05D004808 1.1e-25 120.9 204 38.2
PSO135G0828 Papaver somniferum HOM05D003602 ORTHO05D004808 1.4e-25 120.6 204 37.7
SGA_v2.0_scaffold22G09979 Striga asiatica HOM05D003602 ORTHO05D004808 1.4e-25 120.6 201 38.8
ATR0605G321 Amborella trichopoda HOM05D003602 ORTHO05D004808 1.8e-25 120.2 197 40.1
Phvul.006G114200 Phaseolus vulgaris HOM05D003602 ORTHO05D004808 1.8e-25 120.2 201 37.3
PSO384G3294 Papaver somniferum HOM05D003602 ORTHO05D004808 3.1e-25 119.4 204 37.7
VMungo0540G0209 Vigna mungo HOM05D003602 ORTHO05D004808 3.1e-25 119.4 201 37.8
CANSAT56G2221 Cannabis sativa HOM05D003602 ORTHO05D004808 4.0e-25 119.0 199 38.2
CARHR193560 Cardamine hirsuta HOM05D003602 ORTHO05D004808 4.0e-25 119.0 206 37.4
Ca_23524_v3 Cicer arietinum L. HOM05D003602 ORTHO05D004808 9.0e-25 117.9 201 34.8
Phvul.006G114111 Phaseolus vulgaris HOM05D003602 ORTHO05D004808 1.2e-24 117.5 200 37.0
Aqoxy7G00067 Aquilegia oxysepala HOM05D003602 ORTHO05D004808 1.5e-24 117.1 201 37.8
A02p08760 Brassica napus HOM05D003602 ORTHO05D004808 1.5e-24 117.1 194 36.6
BraA02t05946Z Brassica rapa HOM05D003602 ORTHO05D004808 1.5e-24 117.1 191 36.6
unitig_736.g22809 Utricularia gibba HOM05D003602 ORTHO05D004808 2.0e-24 116.7 201 38.3
Carub.0001s3638 Capsella rubella HOM05D003602 ORTHO05D004808 2.6e-24 116.3 208 39.4
BcaC03g13954 Brassica carinata HOM05D003602 ORTHO05D004808 3.4e-24 115.9 198 36.4
RcHm_v2.0_Chr1g0360031 Rosa chinensis HOM05D003602 ORTHO05D004808 4.5e-24 115.5 194 38.7
HPP92_002938 Vanilla planifolia HOM05D003602 ORTHO05D004808 5.8e-24 115.2 198 36.9
Lj3g0012795 Lotus japonicus HOM05D003602 ORTHO05D004808 9.9e-24 114.4 205 35.1
Sabra14G0073400 Salix brachista HOM05D003602 ORTHO05D004808 9.9e-24 114.4 199 37.7
CARHR195690 Cardamine hirsuta HOM05D003602 ORTHO05D004808 1.3e-23 114.0 197 39.1
TPR.G20226 Trifolium pratense HOM05D003602 ORTHO05D004808 2.2e-23 113.2 204 33.3
Haze_15672 Corylus avellana HOM05D003602 ORTHO05D004808 2.9e-23 112.8 199 35.7
Ah.03g136880 Amaranthus hybridus HOM05D003602 ORTHO05D004808 3.8e-23 112.5 200 37.0
Potri.014G100000 Populus trichocarpa HOM05D003602 ORTHO05D004808 3.8e-23 112.5 199 37.2
Cfa003788 Carpinus fangiana HOM05D003602 ORTHO05D004808 6.4e-23 111.7 199 35.2
Mapoly0156s0024 Marchantia polymorpha HOM05D003602 ORTHO05D004808 6.4e-23 111.7 196 36.2
Prupe.2G190300 Prunus persica HOM05D003602 ORTHO05D004808 6.4e-23 111.7 197 37.1
Ah.14g081150 Amaranthus hybridus HOM05D003602 ORTHO05D004808 8.4e-23 111.3 198 35.9
SHI11330 Sapria himalayana HOM05D003602 ORTHO05D004808 8.4e-23 111.3 201 36.3
EL10Ac6g13271 Beta vulgaris HOM05D003602 ORTHO05D004808 1.9e-22 110.2 197 36.0
Oeu043228.1 Olea europaea HOM05D003602 ORTHO05D004808 1.9e-22 110.2 201 35.8
Medtr8g027450 Medicago truncatula HOM05D003602 ORTHO05D004808 2.4e-22 109.8 201 33.8
Hund27357 Selenicereus undatus HOM05D003602 ORTHO05D004808 3.2e-22 109.4 197 36.5
Dinv32601 Davidia involucrata HOM05D003602 ORTHO05D004808 4.2e-22 109.0 193 37.3
MD01G1083100 Malus domestica HOM05D003602 ORTHO05D004808 5.4e-22 108.6 200 35.5
Cc02_g39500 Coffea canephora HOM05D003602 ORTHO05D004808 7.1e-22 108.2 204 35.3
FvH4_7g16830 Fragaria vesca HOM05D003602 ORTHO05D004808 7.1e-22 108.2 194 37.1
FAN06G4341 Fragaria x ananassa HOM05D003602 ORTHO05D004808 7.1e-22 108.2 194 37.1
FAN10G2704 Fragaria x ananassa HOM05D003602 ORTHO05D004808 7.1e-22 108.2 194 37.1
FAN06G1715 Fragaria x ananassa HOM05D003602 ORTHO05D004808 9.3e-22 107.8 194 36.6
HanXRQChr04g0120491 Helianthus annuus HOM05D003602 ORTHO05D004808 9.3e-22 107.8 201 35.8
Peaxi162Scf00345g00023 Petunia axillaris HOM05D003602 ORTHO05D004808 9.3e-22 107.8 204 33.8
SMO364G0669 Selaginella moellendorffii HOM05D003602 ORTHO05D004808 9.3e-22 107.8 206 36.4
SEGI_02600 Sequoiadendron giganteum HOM05D003602 ORTHO05D004808 9.3e-22 107.8 199 35.2
Sopen01g039780 Solanum pennellii HOM05D003602 ORTHO05D004808 9.3e-22 107.8 204 34.8
CiPaw.01G077200 Carya illinoinensis HOM05D003602 ORTHO05D004808 1.2e-21 107.5 199 34.7
FAN01G1925 Fragaria x ananassa HOM05D003602 ORTHO05D004808 1.2e-21 107.5 194 37.1
Actinidia39220 Actinidia chinensis HOM05D003602 ORTHO05D004808 1.6e-21 107.1 186 36.6
FAN10G3025 Fragaria x ananassa HOM05D003602 ORTHO05D004808 1.6e-21 107.1 194 37.1
QL08p045638 Quercus lobata HOM05D003602 ORTHO05D004808 2.7e-21 106.3 198 37.9
PGSC0003DMG401000117 Solanum tuberosum HOM05D003602 ORTHO05D004808 2.7e-21 106.3 204 34.8
Solyc01g096060.4 Solanum lycopersicum HOM05D003602 ORTHO05D004808 4.6e-21 105.5 204 34.8
FAN03G2718 Fragaria x ananassa HOM05D003602 ORTHO05D004808 6.0e-21 105.1 194 36.1
EL10Ac8g18571 Beta vulgaris HOM05D003602 ORTHO05D004808 1.3e-20 104.0 200 35.5
AUR62020311 Chenopodium quinoa HOM05D003602 ORTHO05D004808 1.3e-20 104.0 194 33.0
CAN.G1415.23 Capsicum annuum HOM05D003602 ORTHO05D004808 1.8e-20 103.6 202 34.7
ECA236G0047 Erigeron canadensis HOM05D003602 ORTHO05D004808 1.8e-20 103.6 201 34.3
Lsat_1_v5_gn_7_961 Lactuca sativa HOM05D003602 ORTHO05D004808 1.8e-20 103.6 202 35.6
Os01g0235400 Oryza sativa ssp. japonica HOM05D003602 ORTHO05D004808 1.8e-20 103.6 207 32.4
Nitab4.5_0002614g0030 Nicotiana tabacum HOM05D003602 ORTHO05D004808 2.3e-20 103.2 202 34.2
Nitab4.5_0001763g0060 Nicotiana tabacum HOM05D003602 ORTHO05D004808 1.1e-19 100.9 202 33.7
Zm00001eb055080 Zea mays HOM05D003602 ORTHO05D004808 1.5e-19 100.5 200 33.0
BcaB03g13365 Brassica carinata HOM05D003602 ORTHO05D004808 2.1e-18 96.7 191 34.6
Pp3c16_3270 Physcomitrium patens HOM05D003602 ORTHO05D004808 2.1e-18 96.7 206 35.0
CAN.G1045.28 Capsicum annuum HOM05D003602 ORTHO05D004808 3.7e-18 95.9 204 33.3
Zm00001eb216140 Zea mays HOM05D003602 ORTHO05D004808 4.8e-18 95.5 208 31.2
Pp3c27_3380 Physcomitrium patens HOM05D003602 ORTHO05D004808 8.1e-18 94.7 200 34.0
Aqoxy4G00207 Aquilegia oxysepala HOM05D003602 ORTHO05D004808 4.5e-16 89.0 171 35.7
CSS0048042 Camellia sinensis var. sinensis HOM05D003602 ORTHO05D004808 4.2e-14 82.4 113 40.7
Oeu007881.3 Olea europaea HOM05D003602 ORTHO05D004808 7.1e-14 81.6 274 27.0
MCO04G210 Micromonas commoda HOM05D003602 ORTHO05D004808 1.5e-08 63.9 179 29.6
Thhalv10019782m.g Eutrema salsugineum HOM05D003602 ORTHO05D004808 2.9e-07 59.7 124 32.3
PRCOL_00001712 Prasinoderma coloniale HOM05D003602 ORTHO05D004808 1.4e-06 57.4 153 28.1
TAR375G0067 Trochodendron aralioides HOM05D003602 ORTHO05D004808 1.4e-06 57.4 89 39.3
Migut.B01885 Erythranthe guttata HOM05D003602 ORTHO05D004808 9.3e-06 54.7 64 40.6


User provided reference genes

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