Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C02p25290 Brassica napus HOM05D010973 ORTHO05D014088 1.6e-166 589.3 304 100.0
C09p49360 Brassica napus HOM05D010973 ORTHO05D014088 3.4e-156 555.1 293 97.3
BolC9t57788H Brassica oleracea HOM05D010973 ORTHO05D014088 1.0e-155 553.5 293 97.3
BcaC03g13719 Brassica carinata HOM05D010973 ORTHO05D014088 7.7e-148 527.3 282 96.8
C02p31140 Brassica napus HOM05D010973 ORTHO05D014088 3.9e-128 461.8 345 75.4
BcaC07g38975 Brassica carinata HOM05D010973 ORTHO05D014088 5.3e-117 424.9 332 73.2
C08p19170 Brassica napus HOM05D010973 ORTHO05D014088 7.7e-116 421.0 320 74.1
C05p27560 Brassica napus HOM05D010973 ORTHO05D014088 1.8e-109 399.8 291 75.9
BcaC06g34072 Brassica carinata HOM05D010973 ORTHO05D014088 1.0e-99 367.5 204 94.1
BolC7t43813H Brassica oleracea HOM05D010973 ORTHO05D014088 4.0e-64 249.2 227 65.2
BolC5t31476H Brassica oleracea HOM05D010973 ORTHO05D014088 9.9e-63 244.6 227 64.8
BcaC06g34075 Brassica carinata HOM05D010973 ORTHO05D014088 3.4e-55 219.5 222 60.4
BcaC05g26903 Brassica carinata HOM05D010973 ORTHO05D014088 5.7e-42 175.6 225 51.6
BcaB03g13985 Brassica carinata HOM05D010973 ORTHO05D014088 1.6e-33 147.5 187 55.6
BcaC06g34074 Brassica carinata HOM05D010973 ORTHO05D014088 4.8e-25 119.4 77 83.1
BcaC06g34073 Brassica carinata HOM05D010973 ORTHO05D095910 6.5e-22 109.0 54 96.3
Thhalv10011596m.g Eutrema salsugineum HOM05D002316 ORTHO05D002280 7.9e-20 102.1 148 47.3
AL1G61670 Arabidopsis lyrata HOM05D002316 ORTHO05D002280 1.0e-19 101.7 148 46.6
C06p09030 Brassica napus HOM05D002316 ORTHO05D002280 2.6e-18 97.1 92 62.0
BcaC08g43517 Brassica carinata HOM05D002316 ORTHO05D002280 7.4e-18 95.5 92 62.0
BolC6t35981H Brassica oleracea HOM05D002316 ORTHO05D002280 7.4e-18 95.5 92 62.0
Aa31LG10G1890 Aethionema arabicum HOM05D002316 ORTHO05D002280 2.2e-17 94.0 156 39.7
A06p01090 Brassica napus HOM05D002316 ORTHO05D002280 2.2e-17 94.0 92 60.9
BraA06t23336Z Brassica rapa HOM05D002316 ORTHO05D002280 2.2e-17 94.0 92 60.9
Sp1g39830 Schrenkiella parvula HOM05D002316 ORTHO05D002280 8.2e-17 92.0 205 38.0
C03p91300 Brassica napus HOM05D002316 ORTHO05D002280 9.1e-16 88.6 93 62.4
BcaB04g17097 Brassica carinata HOM05D002316 ORTHO05D002280 2.0e-15 87.4 145 47.6
BcaC01g01372 Brassica carinata HOM05D002316 ORTHO05D002280 2.6e-15 87.0 93 61.3
BraA08t32224Z Brassica rapa HOM05D002316 ORTHO05D002280 2.6e-15 87.0 204 37.3
BolC3t21445H Brassica oleracea HOM05D002316 ORTHO05D002280 4.5e-15 86.3 93 61.3
A08p01710 Brassica napus HOM05D002316 ORTHO05D002280 2.9e-14 83.6 204 36.3
CARHR043490 Cardamine hirsuta HOM05D002316 ORTHO05D002280 1.1e-13 81.6 197 35.5
CAN.G292.5 Capsicum annuum HOM05D002316 ORTHO05D002280 1.5e-13 81.3 161 34.2
AT1G53250 Arabidopsis thaliana HOM05D002316 ORTHO05D002280 5.5e-13 79.3 166 39.2
Solyc12g014220.3 Solanum lycopersicum HOM05D002316 ORTHO05D002280 3.6e-12 76.6 86 47.7
Carub.0001s4244 Capsella rubella HOM05D002316 ORTHO05D002280 4.7e-12 76.3 148 39.2
Lj8A150T53 Lonicera japonica HOM05D002316 ORTHO05D002280 4.7e-12 76.3 131 38.9
Peaxi162Scf00934g00148 Petunia axillaris HOM05D002316 ORTHO05D002280 1.0e-11 75.1 134 38.1
Sopen12g006010 Solanum pennellii HOM05D002316 ORTHO05D002280 1.4e-11 74.7 86 46.5
Cpa.g.sc131.59 Carica papaya HOM05D002316 ORTHO05D002280 3.0e-11 73.6 92 45.7
GSVIVG01014224001 Vitis vinifera HOM05D002316 ORTHO05D002280 5.2e-11 72.8 108 40.7
Nitab4.5_0000035g0100 Nicotiana tabacum HOM05D002316 ORTHO05D002280 1.1e-10 71.6 121 39.7
Nn1g09090 Nelumbo nucifera HOM05D002316 ORTHO05D002280 2.0e-10 70.9 103 41.7
Dinv14972 Davidia involucrata HOM05D002316 ORTHO05D002280 4.4e-10 69.7 121 36.4
PGSC0003DMG400015334 Solanum tuberosum HOM05D002316 ORTHO05D002280 5.7e-10 69.3 85 44.7
Manes.02G100500 Manihot esculenta HOM05D002316 ORTHO05D002280 2.8e-09 67.0 92 41.3
Nitab4.5_0005440g0080 Nicotiana tabacum HOM05D002316 ORTHO05D002280 3.7e-09 66.6 78 47.4
COL.COLO4_17596 Corchorus olitorius HOM05D002316 ORTHO05D002280 6.3e-09 65.9 112 37.5
Thecc.07G106400 Theobroma cacao HOM05D002316 ORTHO05D002280 8.2e-09 65.5 108 39.8
CSS0043472 Camellia sinensis var. sinensis HOM05D002316 ORTHO05D002280 1.1e-08 65.1 106 39.6
Gohir.D13G153100 Gossypium hirsutum HOM05D002316 ORTHO05D002280 1.1e-08 65.1 108 38.0
Gorai.013G173000 Gossypium raimondii HOM05D002316 ORTHO05D002280 1.1e-08 65.1 108 38.0
Duzib213G0315 Durio zibethinus HOM05D002316 ORTHO05D002280 3.1e-08 63.5 106 39.6
Gohir.A13G148550 Gossypium hirsutum HOM05D002316 ORTHO05D002280 3.1e-08 63.5 108 37.0
AUR62038474 Chenopodium quinoa HOM05D002316 ORTHO05D002280 7.0e-08 62.4 109 34.9
ECA234G4357 Erigeron canadensis HOM05D002316 ORTHO05D002280 7.0e-08 62.4 121 33.1
FAN21G3617 Fragaria x ananassa HOM05D002316 ORTHO05D002280 7.0e-08 62.4 110 38.2
Lsat_1_v5_gn_5_127320 Lactuca sativa HOM05D000043 ORTHO05D009639 7.0e-08 62.4 77 44.2
PGR031G2525 Punica granatum HOM05D002316 ORTHO05D002280 9.1e-08 62.0 110 34.5
Potri.011G112300 Populus trichocarpa HOM05D002316 ORTHO05D002280 1.2e-07 61.6 108 36.1
PSO063G2003 Papaver somniferum HOM05D002478 ORTHO05D002280 2.0e-07 60.8 156 32.1
MBI06_g25991_MAGBIO Magnolia biondii HOM05D002316 ORTHO05D002280 2.7e-07 60.5 131 35.1
TAR624G0302 Trochodendron aralioides HOM05D002316 ORTHO05D002280 3.5e-07 60.1 104 37.5
EL10Ac4g08303 Beta vulgaris HOM05D002316 ORTHO05D002280 4.5e-07 59.7 90 38.9
Eucgr.F03256 Eucalyptus grandis HOM05D002316 ORTHO05D002280 4.5e-07 59.7 93 40.9
Oeu051116.1 Olea europaea HOM05D002316 ORTHO05D002280 4.5e-07 59.7 89 40.4
Duzib213G0761 Durio zibethinus HOM05D002316 ORTHO05D002280 5.9e-07 59.3 70 47.1
MD11G1260000 Malus domestica HOM05D002316 ORTHO05D002280 1.3e-06 58.2 112 35.7
DCAR_017163 Daucus carota HOM05D002316 ORTHO05D002280 1.7e-06 57.8 156 28.2
THA.LOC104810445 Tarenaya hassleriana HOM05D002316 ORTHO05D002280 1.7e-06 57.8 110 34.5
ATR0733G115 Amborella trichopoda HOM05D002316 ORTHO05D002280 2.2e-06 57.4 101 38.6
Migut.H01980 Erythranthe guttata HOM05D002316 ORTHO05D002280 2.2e-06 57.4 137 32.8
Hma1.2p1_0607F.1_g188170 Hydrangea macrophylla HOM05D002316 ORTHO05D002280 2.2e-06 57.4 88 35.2
PSO782G0144 Papaver somniferum HOM05D002478 ORTHO05D002280 2.2e-06 57.4 155 31.6
Cc05_g11320 Coffea canephora HOM05D002316 ORTHO05D002280 2.9e-06 57.0 100 38.0
Sc03g0010430 Simmondsia chinensis HOM05D002316 ORTHO05D002280 5.0e-06 56.2 99 37.4
Atru.chr2.2212 Acer truncatum HOM05D002316 ORTHO05D002280 6.5e-06 55.8 93 36.6
HanXRQChr12g0373471 Helianthus annuus HOM05D002316 ORTHO05D002280 6.5e-06 55.8 85 36.5


User provided reference genes

Program Settings