Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C02p24540 Brassica napus HOM05D020469 ORTHO05D022045 1.4e-81 306.2 153 100.0
C05p39220 Brassica napus HOM05D020469 ORTHO05D022045 6.5e-79 297.4 153 98.0
BolC5t32655H Brassica oleracea HOM05D020469 ORTHO05D022045 5.5e-78 294.3 153 97.4
BolC2t07195H Brassica oleracea HOM05D020469 ORTHO05D022045 4.6e-77 291.2 153 96.1
C03p64770 Brassica napus HOM05D020469 ORTHO05D022045 3.1e-73 278.5 155 92.9
BolC3t18740H Brassica oleracea HOM05D020469 ORTHO05D022045 3.4e-72 275.0 155 92.3
A06p10790 Brassica napus HOM05D000222 ORTHO05D004962 2.1e-29 132.9 87 85.1
BraA06t24257Z Brassica rapa HOM05D000222 ORTHO05D004962 2.1e-29 132.9 87 85.1
BcaC05g25393 Brassica carinata HOM05D000222 ORTHO05D004962 1.5e-27 126.7 88 83.0
C05p12690 Brassica napus HOM05D000222 ORTHO05D004962 1.5e-27 126.7 88 83.0
BolC5t30012H Brassica oleracea HOM05D000222 ORTHO05D004962 1.5e-27 126.7 88 83.0
BcaB02g06545 Brassica carinata HOM05D000222 ORTHO05D004962 2.0e-27 126.3 90 82.2
AL1G26750 Arabidopsis lyrata HOM05D000222 ORTHO05D004962 6.4e-26 121.3 89 77.5
Sp1g13180 Schrenkiella parvula HOM05D000222 ORTHO05D004962 6.4e-26 121.3 88 78.4
AT1G14740 Arabidopsis thaliana HOM05D000222 ORTHO05D004962 8.3e-26 120.9 89 76.4
Carub.0001s1452 Capsella rubella HOM05D000222 ORTHO05D004962 1.1e-25 120.6 89 77.5
Thhalv10006891m.g Eutrema salsugineum HOM05D000222 ORTHO05D004962 2.4e-25 119.4 88 77.3
Aa31LG1G350 Aethionema arabicum HOM05D000222 ORTHO05D004962 5.6e-22 108.2 92 68.5
THA.LOC104805095 Tarenaya hassleriana HOM05D000222 ORTHO05D004962 2.2e-18 96.3 92 66.3
BcaC07g38759 Brassica carinata HOM05D000222 ORTHO05D004962 7.1e-17 91.3 88 61.4
C08p16900 Brassica napus HOM05D000222 ORTHO05D004962 7.1e-17 91.3 88 61.4
BolC8t49317H Brassica oleracea HOM05D000222 ORTHO05D004962 7.1e-17 91.3 88 61.4
BcaB03g13083 Brassica carinata HOM05D000222 ORTHO05D004962 1.3e-15 87.0 88 64.8
Lj2g0002621 Lotus japonicus HOM05D000222 ORTHO05D004962 1.1e-09 67.4 96 46.9
VMungo0251G0007 Vigna mungo HOM05D000222 ORTHO05D004962 5.4e-09 65.1 108 42.6
Lsat_1_v5_gn_2_36420 Lactuca sativa HOM05D000222 ORTHO05D004962 9.2e-09 64.3 95 45.3
arahy.Tifrunner.gnm1.ann1.EPT9JX Arachis hypogaea HOM05D000222 ORTHO05D004962 1.2e-08 63.9 109 41.3
arahy.Tifrunner.gnm1.ann1.J9EPM7 Arachis hypogaea HOM05D000222 ORTHO05D004962 1.2e-08 63.9 109 41.3
Phvul.002G182200 Phaseolus vulgaris HOM05D000222 ORTHO05D004962 1.6e-08 63.5 108 42.6
Lalb_Chr13g0293651 Lupinus albus HOM05D000222 ORTHO05D004962 2.1e-08 63.2 112 40.2
Migut.E00527 Erythranthe guttata HOM05D000222 ORTHO05D004962 1.7e-07 60.1 109 44.0
Phvul.003G014700 Phaseolus vulgaris HOM05D000222 ORTHO05D004962 1.7e-07 60.1 104 44.2
VMungo1215G2627 Vigna mungo HOM05D000222 ORTHO05D004962 1.7e-07 60.1 105 42.9
Duzib248G1586 Durio zibethinus HOM05D000222 ORTHO05D004962 2.3e-07 59.7 122 36.9
TPR.G5124 Trifolium pratense HOM05D000222 ORTHO05D004962 2.3e-07 59.7 104 42.3
Atru.chr11.750 Acer truncatum HOM05D000222 ORTHO05D004962 3.0e-07 59.3 114 39.5
Duzib251G0369 Durio zibethinus HOM05D000222 ORTHO05D004962 3.9e-07 58.9 121 37.2
Gorai.013G031700 Gossypium raimondii HOM05D000222 ORTHO05D004962 3.9e-07 58.9 115 39.1
Lj4g0012229 Lotus japonicus HOM05D000222 ORTHO05D004962 3.9e-07 58.9 109 39.4
Lalb_Chr07g0187811 Lupinus albus HOM05D000222 ORTHO05D004962 3.9e-07 58.9 112 40.2
Glyma.07G174100 Glycine max HOM05D000222 ORTHO05D004962 6.6e-07 58.2 103 44.7
Glyma.20G012600 Glycine max HOM05D000222 ORTHO05D004962 6.6e-07 58.2 103 43.7
Rhsim09G0086600 Rhododendron simsii HOM05D000222 ORTHO05D004962 6.6e-07 58.2 115 37.4
Thecc.02G305400 Theobroma cacao HOM05D000222 ORTHO05D004962 6.6e-07 58.2 120 37.5
Cpa.g.sc2.140 Carica papaya HOM05D000222 ORTHO05D004962 8.6e-07 57.8 116 37.9
ClCG01G006740 Citrullus lanatus HOM05D000222 ORTHO05D004962 1.1e-06 57.4 99 43.4
MELO3C005247.2 Cucumis melo HOM05D000222 ORTHO05D004962 1.1e-06 57.4 99 42.4
Hma1.2p1_0037F.1_g023820 Hydrangea macrophylla HOM05D000222 ORTHO05D004962 1.1e-06 57.4 116 40.5
Psat7g083280 Pisum sativum HOM05D000222 ORTHO05D004962 1.1e-06 57.4 108 40.7
unitig_52.g17291 Utricularia gibba HOM05D000222 ORTHO05D004962 1.1e-06 57.4 111 43.2
Lalb_Chr12g0209391 Lupinus albus HOM05D000222 ORTHO05D004962 1.9e-06 56.6 112 41.1
Ciclev10014296m.g Citrus clementina HOM05D000222 ORTHO05D004962 2.5e-06 56.2 118 39.8
COL.COLO4_27597 Corchorus olitorius HOM05D000222 ORTHO05D004962 2.5e-06 56.2 122 36.9
DCAR_023547 Daucus carota HOM05D000222 ORTHO05D004962 2.5e-06 56.2 112 37.5
DCAR_030303 Daucus carota HOM05D000222 ORTHO05D004962 2.5e-06 56.2 112 39.3
Glyma.05G138900 Glycine max HOM05D000222 ORTHO05D004962 2.5e-06 56.2 113 39.8
Actinidia12434 Actinidia chinensis HOM05D000222 ORTHO05D004962 3.3e-06 55.8 112 41.1
Actinidia20114 Actinidia chinensis HOM05D000222 ORTHO05D004962 3.3e-06 55.8 112 42.9
MD13G1016800 Malus domestica HOM05D000222 ORTHO05D004962 3.3e-06 55.8 116 37.9
PSO063G5028 Papaver somniferum HOM05D000222 ORTHO05D004962 3.3e-06 55.8 114 38.6
PSO782G4980 Papaver somniferum HOM05D000222 ORTHO05D004962 3.3e-06 55.8 114 38.6
CsaV3_5G027810 Cucumis sativus L. HOM05D000222 ORTHO05D004962 4.3e-06 55.5 100 44.0
Sed0000815 Sechium edule HOM05D000222 ORTHO05D004962 4.3e-06 55.5 99 42.4
CAN.G647.5 Capsicum annuum HOM05D000222 ORTHO05D004962 5.6e-06 55.1 101 43.6
FvH4_4g33110 Fragaria vesca HOM05D000222 ORTHO05D004962 5.6e-06 55.1 111 39.6
FAN12G2155 Fragaria x ananassa HOM05D000222 ORTHO05D004962 5.6e-06 55.1 111 39.6
FAN22G0304 Fragaria x ananassa HOM05D000222 ORTHO05D004962 5.6e-06 55.1 111 39.6
Hma1.2p1_1450F.1_g284240 Hydrangea macrophylla HOM05D000222 ORTHO05D004962 5.6e-06 55.1 117 38.5
MD16G1014700 Malus domestica HOM05D000222 ORTHO05D004962 5.6e-06 55.1 116 38.8
Cc11_g05940 Coffea canephora HOM05D000222 ORTHO05D004962 7.3e-06 54.7 113 38.9
Lj6A732T72 Lonicera japonica HOM05D000222 ORTHO05D004962 7.3e-06 54.7 105 39.0
Manes.17G086800 Manihot esculenta HOM05D000222 ORTHO05D004962 7.3e-06 54.7 120 37.5
Ca_11582_v3 Cicer arietinum L. HOM05D000222 ORTHO05D004962 9.6e-06 54.3 108 37.0
Dinv14377 Davidia involucrata HOM05D000222 ORTHO05D004962 9.6e-06 54.3 112 39.3
ECA246G4790 Erigeron canadensis HOM05D000222 ORTHO05D004962 9.6e-06 54.3 103 42.7


User provided reference genes

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