Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C02p24530 Brassica napus HOM05D003134 ORTHO05D003500 4.9e-76 287.7 147 100.0
BolC2t08556H Brassica oleracea HOM05D003134 ORTHO05D003500 1.5e-72 276.2 148 98.0
BcaB05g24377 Brassica carinata HOM05D003134 ORTHO05D003500 5.3e-70 267.7 148 94.6
A02p14980 Brassica napus HOM05D003134 ORTHO05D003500 1.2e-69 266.5 148 95.3
BraA02t06565Z Brassica rapa HOM05D003134 ORTHO05D003500 1.2e-69 266.5 148 95.3
Sp5g23500 Schrenkiella parvula HOM05D003134 ORTHO05D003500 6.9e-62 240.7 149 86.6
A07p32020 Brassica napus HOM05D003134 ORTHO05D003500 2.3e-57 225.7 148 84.5
BraA07t30832Z Brassica rapa HOM05D003134 ORTHO05D003500 2.3e-57 225.7 148 84.5
Thhalv10019521m.g Eutrema salsugineum HOM05D003134 ORTHO05D003500 3.9e-57 224.9 150 84.0
BcaB03g15416 Brassica carinata HOM05D003134 ORTHO05D003500 4.8e-55 218.0 148 82.4
BcaC08g45971 Brassica carinata HOM05D003134 ORTHO05D003500 6.3e-55 217.6 150 81.3
C06p37610 Brassica napus HOM05D003134 ORTHO05D003500 6.3e-55 217.6 150 81.3
BolC6t38864H Brassica oleracea HOM05D003134 ORTHO05D003500 6.3e-55 217.6 150 81.3
BcaB03g15807 Brassica carinata HOM05D003134 ORTHO05D003500 8.2e-55 217.2 147 80.3
BcaC08g46286 Brassica carinata HOM05D003134 ORTHO05D003500 2.7e-50 202.2 148 78.4
C06p41530 Brassica napus HOM05D003134 ORTHO05D003500 2.6e-48 195.7 150 76.0
BolC6t39271H Brassica oleracea HOM05D003134 ORTHO05D003500 2.6e-48 195.7 150 76.0
A07p34840 Brassica napus HOM05D003134 ORTHO05D003500 5.7e-48 194.5 150 76.0
BraA07t31102Z Brassica rapa HOM05D003134 ORTHO05D003500 5.7e-48 194.5 150 76.0
BcaC08g46282 Brassica carinata HOM05D003134 ORTHO05D003500 1.3e-47 193.4 150 75.3
Carub.0002s1492 Capsella rubella HOM05D003134 ORTHO05D003500 2.4e-46 189.1 157 73.2
CARHR061210 Cardamine hirsuta HOM05D003134 ORTHO05D003500 1.3e-44 183.3 155 69.7
AL2G27290 Arabidopsis lyrata HOM05D003134 ORTHO05D003500 1.7e-44 183.0 151 72.8
AT1G68430 Arabidopsis thaliana HOM05D003134 ORTHO05D003500 3.5e-37 158.7 151 66.2
Aa31LG4G14620 Aethionema arabicum HOM05D003134 ORTHO05D003500 5.0e-36 154.8 158 62.7
THA.LOC104808293 Tarenaya hassleriana HOM05D003134 ORTHO05D003500 1.0e-33 147.1 164 57.3
TWI31G0745 Tripterygium wilfordii HOM05D003134 ORTHO05D003500 7.7e-21 104.4 164 44.5
Ciclev10016989m.g Citrus clementina HOM05D003134 ORTHO05D003500 2.3e-20 102.8 170 45.3
COL.COLO4_32156 Corchorus olitorius HOM05D003134 ORTHO05D003500 2.3e-20 102.8 166 45.2
Prupe.1G315800 Prunus persica HOM05D003134 ORTHO05D003500 2.9e-20 102.4 149 46.3
Cpa.g.sc65.57 Carica papaya HOM05D003134 ORTHO05D003500 1.1e-19 100.5 165 45.5
Cfa015852 Carpinus fangiana HOM05D003134 ORTHO05D003500 5.5e-19 98.2 154 46.8
Cfa015853 Carpinus fangiana HOM05D003134 ORTHO05D003500 5.5e-19 98.2 154 47.4
Thecc.02G223300 Theobroma cacao HOM05D003134 ORTHO05D003500 9.5e-19 97.4 164 46.3
Cfa015849 Carpinus fangiana HOM05D003134 ORTHO05D003500 2.8e-18 95.9 154 47.4
Manes.06G065600 Manihot esculenta HOM05D003134 ORTHO05D003500 4.7e-18 95.1 156 44.9
QL01p040313 Quercus lobata HOM05D003134 ORTHO05D003500 6.1e-18 94.7 157 43.9
Duzib251G0591 Durio zibethinus HOM05D003134 ORTHO05D003500 8.0e-18 94.4 162 44.4
Gohir.D02G171600 Gossypium hirsutum HOM05D003134 ORTHO05D003500 1.0e-17 94.0 163 46.0
Gorai.005G193000 Gossypium raimondii HOM05D003134 ORTHO05D003500 1.0e-17 94.0 163 46.0
CiPaw.05G241000 Carya illinoinensis HOM05D003134 ORTHO05D003500 1.4e-17 93.6 160 45.6
Sabra10G0091400 Salix brachista HOM05D003134 ORTHO05D003500 2.3e-17 92.8 156 44.2
MD16G1038900 Malus domestica HOM05D003134 ORTHO05D003500 2.0e-16 89.7 149 40.9
Gohir.A03G148500 Gossypium hirsutum HOM05D003134 ORTHO05D003500 4.4e-16 88.6 163 44.8
CSS0042149 Camellia sinensis var. sinensis HOM05D003134 ORTHO05D003500 7.5e-16 87.8 162 42.0
Cpa.g.sc170.42 Carica papaya HOM05D003134 ORTHO05D003500 2.8e-15 85.9 168 40.5
Lalb_Chr02g0145791 Lupinus albus HOM05D003134 ORTHO05D003500 2.8e-15 85.9 154 44.2
Potri.010G121300 Populus trichocarpa HOM05D003134 ORTHO05D003500 4.9e-15 85.1 154 39.6
Sabra04G0066000 Salix brachista HOM05D003134 ORTHO05D003500 6.3e-15 84.7 151 43.7
TAR374G1690 Trochodendron aralioides HOM05D003134 ORTHO05D003500 8.3e-15 84.3 155 41.3
Medtr1g110190 Medicago truncatula HOM05D003134 ORTHO05D003500 1.1e-14 84.0 151 47.0
Oeu012575.1 Olea europaea HOM05D003134 ORTHO05D003500 1.1e-14 84.0 163 41.7
Hma1.2p1_1109F.1_g258190 Hydrangea macrophylla HOM05D003134 ORTHO05D003500 1.4e-14 83.6 158 43.0
TAR433G0003 Trochodendron aralioides HOM05D003134 ORTHO05D003500 1.4e-14 83.6 154 40.9
Duzib268G0372 Durio zibethinus HOM05D003134 ORTHO05D003500 1.8e-14 83.2 163 42.3
MD13G1036300 Malus domestica HOM05D003134 ORTHO05D003500 1.8e-14 83.2 149 39.6
Glyma.20G119200 Glycine max HOM05D003134 ORTHO05D003500 3.1e-14 82.4 147 40.8
MD17G1247700 Malus domestica HOM05D003134 ORTHO05D003500 3.1e-14 82.4 168 41.1
Prupe.3G146400 Prunus persica HOM05D003134 ORTHO05D003500 5.4e-14 81.6 168 39.9
Oeu012577.1 Olea europaea HOM05D003134 ORTHO05D003500 7.0e-14 81.3 160 42.5
PGR119G2525 Punica granatum HOM05D003134 ORTHO05D003500 7.0e-14 81.3 153 46.4
RcHm_v2.0_Chr4g0434621 Rosa chinensis HOM05D003134 ORTHO05D003500 7.0e-14 81.3 153 43.1
Oeu039736.1 Olea europaea HOM05D003134 ORTHO05D003500 1.6e-13 80.1 160 40.0
CANSAT01G0067 Cannabis sativa HOM05D003134 ORTHO05D003500 2.0e-13 79.7 175 38.9
Lj4P188T25 Lonicera japonica HOM05D003134 ORTHO05D003500 2.0e-13 79.7 156 42.9
Rhsim08G0083300 Rhododendron simsii HOM05D003134 ORTHO05D003500 2.7e-13 79.3 161 40.4
Nn3g17932 Nelumbo nucifera HOM05D003134 ORTHO05D003500 3.5e-13 79.0 164 39.6
PGR042G1462 Punica granatum HOM05D003134 ORTHO05D003500 3.5e-13 79.0 160 38.8
Lsat_1_v5_gn_3_80541 Lactuca sativa HOM05D003134 ORTHO05D003500 4.5e-13 78.6 153 43.8
Ciclev10013038m.g Citrus clementina HOM05D003134 ORTHO05D003500 5.9e-13 78.2 159 38.4
FvH4_4g26860 Fragaria vesca HOM05D003134 ORTHO05D003500 5.9e-13 78.2 151 43.0
VMungo0720G1250 Vigna mungo HOM05D000260 ORTHO05D000318 7.8e-13 77.8 148 40.5
Dinv33962 Davidia involucrata HOM05D003134 ORTHO05D003500 1.0e-12 77.4 159 39.6
Phvul.007G030600 Phaseolus vulgaris HOM05D003134 ORTHO05D003500 1.3e-12 77.0 148 41.9
SalBow5G3107 Salvia bowleyana HOM05D003134 ORTHO05D003500 1.3e-12 77.0 151 39.7
SalBow5G4218 Salvia bowleyana HOM05D003134 ORTHO05D003500 1.3e-12 77.0 151 39.7
FAN12G3405 Fragaria x ananassa HOM05D003134 ORTHO05D003500 1.7e-12 76.6 150 42.0
FAN22G0900 Fragaria x ananassa HOM05D003134 ORTHO05D003500 1.7e-12 76.6 151 44.4
Solyc03g034300.1 Solanum lycopersicum HOM05D003134 ORTHO05D003500 2.9e-12 75.9 156 39.1
PGSC0003DMG400002449 Solanum tuberosum HOM05D003134 ORTHO05D003500 2.9e-12 75.9 169 35.5
ClCG11G007810 Citrullus lanatus HOM05D003134 ORTHO05D003500 3.8e-12 75.5 165 36.4
Psat6g225360 Pisum sativum HOM05D003134 ORTHO05D003500 3.8e-12 75.5 150 41.3
SGA_v2.0_scaffold49G18114 Striga asiatica HOM05D003134 ORTHO05D003500 3.8e-12 75.5 156 39.7
CANSAT78G1475 Cannabis sativa HOM05D003134 ORTHO05D003500 5.0e-12 75.1 172 39.0
Sed0003377 Sechium edule HOM05D003134 ORTHO05D003500 5.0e-12 75.1 152 36.2
Manes.02G070500 Manihot esculenta HOM05D003134 ORTHO05D003500 6.6e-12 74.7 157 36.3
TPR.G36596 Trifolium pratense HOM05D003134 ORTHO05D003500 6.6e-12 74.7 162 38.3
Dinv34801 Davidia involucrata HOM05D003134 ORTHO05D003500 8.6e-12 74.3 160 39.4
PGSC0003DMG400024380 Solanum tuberosum HOM05D003134 ORTHO05D003500 8.6e-12 74.3 169 34.9
Atru.chr1.1630 Acer truncatum HOM05D003134 ORTHO05D003500 1.1e-11 73.9 155 36.8
MELO3C008147.2 Cucumis melo HOM05D003134 ORTHO05D003500 1.5e-11 73.6 167 37.7
Solyc02g086260.1 Solanum lycopersicum HOM05D003134 ORTHO05D003500 2.5e-11 72.8 163 39.9
Migut.H00233 Erythranthe guttata HOM05D003134 ORTHO05D003500 3.3e-11 72.4 167 37.1
Sed0007756 Sechium edule HOM05D003134 ORTHO05D003500 3.3e-11 72.4 160 36.9
Cc07_g08620 Coffea canephora HOM05D003134 ORTHO05D003500 4.3e-11 72.0 169 37.9
Manes.01G112200 Manihot esculenta HOM05D003134 ORTHO05D003500 4.3e-11 72.0 161 40.4
Oeu008433.1 Olea europaea HOM05D003134 ORTHO05D003500 5.6e-11 71.6 162 36.4
Psat3g098080 Pisum sativum HOM05D003134 ORTHO05D003500 5.6e-11 71.6 164 36.6
Actinidia17642 Actinidia chinensis HOM05D003134 ORTHO05D003500 7.3e-11 71.2 148 39.9
Ca_08085_v3 Cicer arietinum L. HOM05D003134 ORTHO05D003500 7.3e-11 71.2 160 36.2
Potri.017G117866 Populus trichocarpa HOM05D003134 ORTHO05D003500 7.3e-11 71.2 150 38.7
Sopen03g007090 Solanum pennellii HOM05D003134 ORTHO05D003500 7.3e-11 71.2 159 37.1
ClCG01G005860 Citrullus lanatus HOM05D003134 ORTHO05D003500 9.5e-11 70.9 155 38.7
CsaV3_2G033780 Cucumis sativus L. HOM05D003134 ORTHO05D003500 9.5e-11 70.9 169 37.9
Oeu036853.1 Olea europaea HOM05D003134 ORTHO05D003500 9.5e-11 70.9 160 36.2
Sp7g03820 Schrenkiella parvula HOM05D003134 ORTHO05D003500 9.5e-11 70.9 167 37.7
Glyma.02G088600 Glycine max HOM05D003134 ORTHO05D003500 1.6e-10 70.1 161 38.5
Potri.008G123800 Populus trichocarpa HOM05D003134 ORTHO05D003500 1.6e-10 70.1 101 48.5
FAN03G2307 Fragaria x ananassa HOM05D003134 ORTHO05D003500 2.1e-10 69.7 163 38.0
Medtr7g082520 Medicago truncatula HOM05D003134 ORTHO05D003500 2.1e-10 69.7 161 34.8
Sc10g0001080 Simmondsia chinensis HOM05D003134 ORTHO05D003500 2.1e-10 69.7 161 37.9
AUR62009019 Chenopodium quinoa HOM05D003134 ORTHO05D003500 2.8e-10 69.3 172 38.4
FAN02G1640 Fragaria x ananassa HOM05D003134 ORTHO05D003500 2.8e-10 69.3 164 39.0
SalBow3G2725 Salvia bowleyana HOM05D003134 ORTHO05D003500 2.8e-10 69.3 152 38.2
TAR622G0779 Trochodendron aralioides HOM05D003134 ORTHO05D003500 2.8e-10 69.3 158 36.1
TAR622G1269 Trochodendron aralioides HOM05D003134 ORTHO05D003500 2.8e-10 69.3 158 36.1
DCAR_021449 Daucus carota HOM05D003134 ORTHO05D003500 3.6e-10 68.9 157 36.3
Lj5g0013847 Lotus japonicus HOM05D003134 ORTHO05D003500 3.6e-10 68.9 161 39.1
Peaxi162Scf00104g00142 Petunia axillaris HOM05D003134 ORTHO05D003500 3.6e-10 68.9 149 40.9
Potri.004G097200 Populus trichocarpa HOM05D003134 ORTHO05D003500 3.6e-10 68.9 151 37.1
EL10Ac2g04546 Beta vulgaris HOM05D003134 ORTHO05D003500 4.7e-10 68.6 171 36.8
Gohir.D11G171400 Gossypium hirsutum HOM05D003134 ORTHO05D003500 4.7e-10 68.6 166 34.9
Gorai.007G183800 Gossypium raimondii HOM05D003134 ORTHO05D003500 4.7e-10 68.6 166 34.9
FAN07G2257 Fragaria x ananassa HOM05D003134 ORTHO05D003500 6.1e-10 68.2 147 41.5
CsaV3_5G028830 Cucumis sativus L. HOM05D003134 ORTHO05D003500 8.0e-10 67.8 162 39.5
FAN17G2365 Fragaria x ananassa HOM05D003134 ORTHO05D003500 8.0e-10 67.8 149 38.9
Gohir.A11G165400 Gossypium hirsutum HOM05D003134 ORTHO05D003500 8.0e-10 67.8 166 34.9
FAN14G3652 Fragaria x ananassa HOM05D003134 ORTHO05D003500 1.4e-09 67.0 162 37.7
Glyma.18G294900 Glycine max HOM05D003134 ORTHO05D003500 1.4e-09 67.0 160 36.9
Nitab4.5_0015828g0010 Nicotiana tabacum HOM05D003134 ORTHO05D003500 1.8e-09 66.6 163 36.2
VMungo1383G0351 Vigna mungo HOM05D003134 ORTHO05D003500 1.8e-09 66.6 171 35.7
Sed0004988 Sechium edule HOM05D003134 ORTHO05D003500 2.3e-09 66.2 151 37.1
unitig_0.g841 Utricularia gibba HOM05D003134 ORTHO05D003500 2.3e-09 66.2 148 35.8
FAN01G0579 Fragaria x ananassa HOM05D003134 ORTHO05D003500 3.1e-09 65.9 164 37.8
Oeu030792.1 Olea europaea HOM05D000260 ORTHO05D000318 3.1e-09 65.9 150 36.7
Sp5g21880 Schrenkiella parvula HOM05D003134 ORTHO05D003500 3.1e-09 65.9 165 36.4
THA.LOC104823851 Tarenaya hassleriana HOM05D003134 ORTHO05D003500 3.1e-09 65.9 158 38.0
AUR62023283 Chenopodium quinoa HOM05D003134 ORTHO05D003500 4.0e-09 65.5 171 36.8
RcHm_v2.0_Chr1g0326241 Rosa chinensis HOM05D003134 ORTHO05D003500 5.2e-09 65.1 174 35.1
BraA07t30998Z Brassica rapa HOM05D003134 ORTHO05D003500 6.8e-09 64.7 165 36.4
MBI16_g37123_MAGBIO Magnolia biondii HOM05D003134 ORTHO05D003500 6.8e-09 64.7 161 34.8
Duzib138G0856 Durio zibethinus HOM05D003134 ORTHO05D003500 8.9e-09 64.3 168 32.7
Lalb_Chr10g0091341 Lupinus albus HOM05D003134 ORTHO05D003500 8.9e-09 64.3 155 36.8
Nitab4.5_0000625g0110 Nicotiana tabacum HOM05D003134 ORTHO05D003500 8.9e-09 64.3 163 35.6
Haze_14180 Corylus avellana HOM05D003134 ORTHO05D003500 1.2e-08 63.9 173 36.4
Ah.16g101650 Amaranthus hybridus HOM05D003134 ORTHO05D003500 1.5e-08 63.5 162 35.2
Cfa007900 Carpinus fangiana HOM05D003134 ORTHO05D003500 1.5e-08 63.5 178 34.3
FAN16G3541 Fragaria x ananassa HOM05D003134 ORTHO05D003500 1.5e-08 63.5 162 37.7
Lj1g0014230 Lotus japonicus HOM05D003134 ORTHO05D003500 1.5e-08 63.5 171 33.3
THA.LOC104805579 Tarenaya hassleriana HOM05D003134 ORTHO05D003500 2.0e-08 63.2 176 34.7
Thhalv10019248m.g Eutrema salsugineum HOM05D003134 ORTHO05D003500 2.6e-08 62.8 166 35.5
Nitab4.5_0000753g0120 Nicotiana tabacum HOM05D003134 ORTHO05D003500 2.6e-08 62.8 95 48.4
ATR1125G046 Amborella trichopoda HOM05D003134 ORTHO05D003500 3.4e-08 62.4 169 32.5
FAN12G3727 Fragaria x ananassa HOM05D003134 ORTHO05D003500 4.4e-08 62.0 98 46.9
BcaC08g46122 Brassica carinata HOM05D003134 ORTHO05D003500 5.8e-08 61.6 173 34.1
AL2G25140 Arabidopsis lyrata HOM05D003134 ORTHO05D003500 7.5e-08 61.2 167 38.3
MELO3C005343.2 Cucumis melo HOM05D003134 ORTHO05D003500 7.5e-08 61.2 166 39.2
Peaxi162Scf00394g00095 Petunia axillaris HOM05D003134 ORTHO05D003500 7.5e-08 61.2 98 44.9
BcaB03g15220 Brassica carinata HOM05D003134 ORTHO05D003500 9.8e-08 60.8 168 35.1
C06p43260 Brassica napus HOM05D003134 ORTHO05D003500 9.8e-08 60.8 164 34.8
Duzib133G1507 Durio zibethinus HOM05D003134 ORTHO05D003500 9.8e-08 60.8 173 31.8
Migut.L00500 Erythranthe guttata HOM05D003134 ORTHO05D003500 9.8e-08 60.8 167 37.1
PGR004G0132 Punica granatum HOM05D003134 ORTHO05D003500 1.3e-07 60.5 164 34.8
A07p33710 Brassica napus HOM05D003134 ORTHO05D003500 1.7e-07 60.1 174 36.8
FAN10G2348 Fragaria x ananassa HOM05D003134 ORTHO05D003500 1.7e-07 60.1 164 36.0
CiPaw.03G063500 Carya illinoinensis HOM05D003134 ORTHO05D003500 2.2e-07 59.7 185 33.5
Phvul.008G007800 Phaseolus vulgaris HOM05D003134 ORTHO05D003500 2.2e-07 59.7 158 36.7
QL02p049588 Quercus lobata HOM05D003134 ORTHO05D003500 2.2e-07 59.7 182 34.1
HanXRQChr12g0375681 Helianthus annuus HOM05D003134 ORTHO05D003500 2.9e-07 59.3 161 36.6
FAN23G1965 Fragaria x ananassa HOM05D003134 ORTHO05D003500 3.7e-07 58.9 161 34.8
Lsat_1_v5_gn_2_81120 Lactuca sativa HOM05D003134 ORTHO05D003500 3.7e-07 58.9 158 34.2
PSO017G0284 Papaver somniferum HOM05D003134 ORTHO05D003500 3.7e-07 58.9 171 35.7
PSO170G0811 Papaver somniferum HOM05D003134 ORTHO05D003500 3.7e-07 58.9 171 32.7
FAN10G3294 Fragaria x ananassa HOM05D000266 ORTHO05D000765 6.4e-07 58.2 164 36.0
PGSC0003DMG400026385 Solanum tuberosum HOM05D001447 ORTHO05D005923 8.3e-07 57.8 97 44.3
FvH4_7g03610 Fragaria vesca HOM05D003134 ORTHO05D003500 1.1e-06 57.4 166 36.1
FAN06G4960 Fragaria x ananassa HOM05D003134 ORTHO05D003500 1.1e-06 57.4 166 36.1
Haze_24605 Corylus avellana HOM05D003134 ORTHO05D003500 1.4e-06 57.0 49 65.3
FAN28G2684 Fragaria x ananassa HOM05D003134 ORTHO05D003500 1.4e-06 57.0 164 36.0
Lalb_Chr06g0165891 Lupinus albus HOM05D003134 ORTHO05D003500 1.4e-06 57.0 58 60.3
ECA238G3055 Erigeron canadensis HOM05D003134 ORTHO05D003500 2.4e-06 56.2 162 34.0
Aa31LG2G3400 Aethionema arabicum HOM05D003134 ORTHO05D003500 3.2e-06 55.8 178 32.6
QL02p050634 Quercus lobata HOM05D003134 ORTHO05D003500 3.2e-06 55.8 183 33.3
Ah.10g037670 Amaranthus hybridus HOM05D003134 ORTHO05D003500 4.1e-06 55.5 163 33.7


User provided reference genes

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