Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C02p24130 Brassica napus HOM05D001218 ORTHO05D041870 1.6e-49 199.1 101 100.0
BraA10t43274Z Brassica rapa HOM05D001218 ORTHO05D041870 1.2e-28 129.8 76 89.5
Sp1g18650 Schrenkiella parvula HOM05D001218 ORTHO05D004088 1.4e-13 79.7 65 69.2
Aa31LG7G5130 Aethionema arabicum HOM05D001218 ORTHO05D004088 1.8e-13 79.3 65 69.2
Thhalv10007087m.g Eutrema salsugineum HOM05D001218 ORTHO05D004088 1.8e-13 79.3 65 69.2
Carub.0001s2042 Capsella rubella HOM05D001218 ORTHO05D004088 3.1e-13 78.6 65 69.2
BcaB03g12841 Brassica carinata HOM05D001218 ORTHO05D004088 4.1e-13 78.2 65 67.7
BcaB07g32089 Brassica carinata HOM05D001218 ORTHO05D004088 4.1e-13 78.2 65 67.7
BcaC05g26002 Brassica carinata HOM05D001218 ORTHO05D004088 4.1e-13 78.2 65 67.7
BcaC07g39066 Brassica carinata HOM05D001218 ORTHO05D004088 4.1e-13 78.2 65 67.7
A06p16940 Brassica napus HOM05D001218 ORTHO05D004088 4.1e-13 78.2 65 67.7
A08p29140 Brassica napus HOM05D001218 ORTHO05D004088 4.1e-13 78.2 65 67.7
C05p19600 Brassica napus HOM05D001218 ORTHO05D004088 4.1e-13 78.2 65 67.7
C08p20520 Brassica napus HOM05D001218 ORTHO05D004088 4.1e-13 78.2 65 67.7
BolC5t30663H Brassica oleracea HOM05D001218 ORTHO05D004088 4.1e-13 78.2 65 67.7
BraA06t24804Z Brassica rapa HOM05D001218 ORTHO05D004088 4.1e-13 78.2 65 67.7
CARHR021410 Cardamine hirsuta HOM05D001218 ORTHO05D004088 5.3e-13 77.8 65 67.7
MD06G1002300 Malus domestica HOM05D001218 ORTHO05D004088 7.0e-13 77.4 79 58.2
Prupe.5G003400 Prunus persica HOM05D001218 ORTHO05D004088 2.0e-12 75.9 79 57.0
AT1G20950 Arabidopsis thaliana HOM05D001218 ORTHO05D004088 3.5e-12 75.1 65 66.2
CAN.G208.42 Capsicum annuum HOM05D001218 ORTHO05D004088 3.5e-12 75.1 65 63.1
Thhalv10018291m.g Eutrema salsugineum HOM05D001218 ORTHO05D004088 5.9e-12 74.3 97 52.6
Solyc12g095760.2 Solanum lycopersicum HOM05D001218 ORTHO05D004088 5.9e-12 74.3 65 63.1
Sopen12g031660 Solanum pennellii HOM05D001218 ORTHO05D004088 5.9e-12 74.3 65 63.1
AL1G33980 Arabidopsis lyrata HOM05D001218 ORTHO05D004088 7.7e-12 73.9 97 53.6
Nitab4.5_0001309g0150 Nicotiana tabacum HOM05D001218 ORTHO05D004088 7.7e-12 73.9 65 63.1
PGR031G3703 Punica granatum HOM05D001218 ORTHO05D004088 7.7e-12 73.9 80 55.0
BcaC08g47163 Brassica carinata HOM05D001218 ORTHO05D004088 1.0e-11 73.6 65 61.5
Duzib116G0454 Durio zibethinus HOM05D001218 ORTHO05D004088 1.0e-11 73.6 75 56.0
Nitab4.5_0003423g0060 Nicotiana tabacum HOM05D001218 ORTHO05D004088 1.0e-11 73.6 65 61.5
PGSC0003DMG400029309 Solanum tuberosum HOM05D001218 ORTHO05D004088 1.0e-11 73.6 65 61.5
Cpa.g.c24967.5 Carica papaya HOM05D001218 ORTHO05D004088 1.3e-11 73.2 65 60.0
Peaxi162Scf00064g01432 Petunia axillaris HOM05D001218 ORTHO05D004088 1.7e-11 72.8 68 61.8
THA.LOC104812017 Tarenaya hassleriana HOM05D001218 ORTHO05D004088 1.7e-11 72.8 65 63.1
BcaC08g47232 Brassica carinata HOM05D001218 ORTHO05D004088 2.2e-11 72.4 97 51.5
A07p42210 Brassica napus HOM05D001218 ORTHO05D004088 2.2e-11 72.4 97 51.5
C06p50810 Brassica napus HOM05D001218 ORTHO05D004088 2.2e-11 72.4 97 51.5
BolC6t40103H Brassica oleracea HOM05D001218 ORTHO05D004088 2.2e-11 72.4 97 51.5
BraA07t31750Z Brassica rapa HOM05D001218 ORTHO05D004088 2.2e-11 72.4 97 51.5
Duzib093G2014 Durio zibethinus HOM05D001218 ORTHO05D004088 2.2e-11 72.4 66 57.6
Eucgr.F01823 Eucalyptus grandis HOM05D001218 ORTHO05D004088 2.2e-11 72.4 65 61.5
AL2G36690 Arabidopsis lyrata HOM05D001218 ORTHO05D004088 2.9e-11 72.0 97 50.5
arahy.Tifrunner.gnm1.ann1.H559FZ Arachis hypogaea HOM05D001218 ORTHO05D004088 2.9e-11 72.0 69 58.0
FAN04G0409 Fragaria x ananassa HOM05D001218 ORTHO05D004088 2.9e-11 72.0 79 54.4
FAN08G1986 Fragaria x ananassa HOM05D001218 ORTHO05D004088 2.9e-11 72.0 70 58.6
FAN18G2420 Fragaria x ananassa HOM05D001218 ORTHO05D004088 2.9e-11 72.0 79 54.4
Sp5g31710 Schrenkiella parvula HOM05D001218 ORTHO05D004088 2.9e-11 72.0 97 51.5
Carub.0002s2346 Capsella rubella HOM05D001218 ORTHO05D004088 3.8e-11 71.6 65 60.0
CARHR070100 Cardamine hirsuta HOM05D001218 ORTHO05D004088 5.0e-11 71.2 65 58.5
SGA_v2.0_scaffold227G43178 Striga asiatica HOM05D001218 ORTHO05D004088 5.0e-11 71.2 65 60.0
Thecc.08G098300 Theobroma cacao HOM05D001218 ORTHO05D004088 5.0e-11 71.2 65 60.0
Phvul.003G009600 Phaseolus vulgaris HOM05D001218 ORTHO05D004088 6.5e-11 70.9 65 60.0
C02p24000 Brassica napus HOM05D006421 ORTHO05D008268 8.5e-11 70.5 36 97.2
Dinv23340 Davidia involucrata HOM05D001218 ORTHO05D004088 8.5e-11 70.5 80 52.5
Lsat_1_v5_gn_9_48180 Lactuca sativa HOM05D001218 ORTHO05D004088 8.5e-11 70.5 76 53.9
Peaxi162Scf00385g00622 Petunia axillaris HOM05D001218 ORTHO05D004088 8.5e-11 70.5 65 61.5
Psat6g131840 Pisum sativum HOM05D001218 ORTHO05D004088 8.5e-11 70.5 65 60.0
TWI12G0956 Tripterygium wilfordii HOM05D001218 ORTHO05D004088 8.5e-11 70.5 65 60.0
TPR.G18596 Trifolium pratense HOM05D001218 ORTHO05D004088 1.1e-10 70.1 65 61.5
Ca_12496_v3 Cicer arietinum L. HOM05D001218 ORTHO05D004088 1.5e-10 69.7 65 60.0
FvH4_5g26380 Fragaria vesca HOM05D001218 ORTHO05D004088 1.5e-10 69.7 79 53.2
FAN13G0530 Fragaria x ananassa HOM05D001218 ORTHO05D004088 1.5e-10 69.7 79 53.2
Glyma.07G160500 Glycine max HOM05D001218 ORTHO05D004088 1.5e-10 69.7 65 58.5
HanXRQChr16g0512491 Helianthus annuus HOM05D001218 ORTHO05D004088 1.9e-10 69.3 65 58.5
Manes.18G001100 Manihot esculenta HOM05D001218 ORTHO05D004088 1.9e-10 69.3 80 51.2
PGSC0003DMG400010007 Solanum tuberosum HOM05D001218 ORTHO05D004088 1.9e-10 69.3 65 60.0
GSVIVG01013442001 Vitis vinifera HOM05D001218 ORTHO05D004088 1.9e-10 69.3 80 52.5
Cfa014150 Carpinus fangiana HOM05D001218 ORTHO05D004088 2.5e-10 68.9 65 58.5
Glyma.20G007400 Glycine max HOM05D001218 ORTHO05D004088 2.5e-10 68.9 65 58.5
Nitab4.5_0000464g0120 Nicotiana tabacum HOM05D001218 ORTHO05D004088 2.5e-10 68.9 65 60.0
RcHm_v2.0_Chr7g0217221 Rosa chinensis HOM05D001218 ORTHO05D004088 2.5e-10 68.9 68 57.4
Actinidia15552 Actinidia chinensis HOM05D001218 ORTHO05D004088 3.2e-10 68.6 80 51.2
CAN.G1330.23 Capsicum annuum HOM05D001218 ORTHO05D004088 3.2e-10 68.6 65 58.5
Ciclev10000595m.g Citrus clementina HOM05D001218 ORTHO05D004088 3.2e-10 68.6 80 51.2
THA.LOC104813730 Tarenaya hassleriana HOM05D001218 ORTHO05D004088 3.2e-10 68.6 65 61.5
TWI36G0968 Tripterygium wilfordii HOM05D001218 ORTHO05D004088 3.2e-10 68.6 65 58.5
Medtr1g035230 Medicago truncatula HOM05D001218 ORTHO05D004088 4.2e-10 68.2 65 58.5
Potri.005G257800 Populus trichocarpa HOM05D001218 ORTHO05D004088 4.2e-10 68.2 65 56.9
QL02p016004 Quercus lobata HOM05D001218 ORTHO05D004088 4.2e-10 68.2 65 56.9
Rhsim06G0002000 Rhododendron simsii HOM05D001218 ORTHO05D004088 4.2e-10 68.2 80 51.2
Atru.chr13.35 Acer truncatum HOM05D001218 ORTHO05D004088 5.5e-10 67.8 65 58.5
AT1G76550 Arabidopsis thaliana HOM05D001218 ORTHO05D004088 7.2e-10 67.4 97 48.5
CSS0003035 Camellia sinensis var. sinensis HOM05D001218 ORTHO05D004088 9.4e-10 67.0 80 51.2
CsaV3_4G037690 Cucumis sativus L. HOM05D001218 ORTHO05D004088 9.4e-10 67.0 65 55.4
Lj2g0017094 Lotus japonicus HOM05D001218 ORTHO05D004088 9.4e-10 67.0 65 56.9
Lalb_Chr04g0258861 Lupinus albus HOM05D001218 ORTHO05D004088 9.4e-10 67.0 76 48.7
Lalb_Chr17g0338171 Lupinus albus HOM05D001218 ORTHO05D004088 9.4e-10 67.0 76 50.0
Manes.05G129500 Manihot esculenta HOM05D001218 ORTHO05D004088 9.4e-10 67.0 80 50.0
Solyc04g082880.4 Solanum lycopersicum HOM05D001218 ORTHO05D004088 9.4e-10 67.0 65 56.9
Sopen04g036520 Solanum pennellii HOM05D001218 ORTHO05D004088 9.4e-10 67.0 65 56.9
CiPaw.08G078100 Carya illinoinensis HOM05D001218 ORTHO05D004088 1.2e-09 66.6 65 55.4
ECA232G2106 Erigeron canadensis HOM05D001218 ORTHO05D004088 1.2e-09 66.6 65 55.4
Sed0027532 Sechium edule HOM05D001218 ORTHO05D004088 1.2e-09 66.6 65 55.4
THA.LOC104804960 Tarenaya hassleriana HOM05D001218 ORTHO05D004088 1.2e-09 66.6 76 50.0
MSTRG.1008 Avicennia marina HOM05D001218 ORTHO05D004088 1.6e-09 66.2 65 56.9
MSTRG.24523 Avicennia marina HOM05D001218 ORTHO05D004088 1.6e-09 66.2 65 58.5
EL10Ac1g01822 Beta vulgaris HOM05D001218 ORTHO05D004088 1.6e-09 66.2 80 50.0
CANSAT25G3586 Cannabis sativa HOM05D001218 ORTHO05D004088 1.6e-09 66.2 65 56.9
CiPaw.07G131800 Carya illinoinensis HOM05D001218 ORTHO05D004088 1.6e-09 66.2 65 55.4
vmacro21744 Vaccinium macrocarpon HOM05D001218 ORTHO05D004088 1.6e-09 66.2 80 50.0
Oeu035767.1 Olea europaea HOM05D001218 ORTHO05D004088 2.1e-09 65.9 65 56.9
Psat2g088600 Pisum sativum HOM05D001218 ORTHO05D015696 2.1e-09 65.9 65 53.8
Potri.002G003100 Populus trichocarpa HOM05D001218 ORTHO05D004088 2.1e-09 65.9 80 48.8
Sabra02G0002000 Salix brachista HOM05D001218 ORTHO05D004088 2.1e-09 65.9 80 48.8
MSTRG.24899 Avicennia marina HOM05D001218 ORTHO05D004088 2.7e-09 65.5 65 55.4
ClCG11G019100 Citrullus lanatus HOM05D001218 ORTHO05D004088 2.7e-09 65.5 65 53.8
Migut.C00344 Erythranthe guttata HOM05D001218 ORTHO05D004088 2.7e-09 65.5 65 55.4
Lalb_Chr10g0095321 Lupinus albus HOM05D001218 ORTHO05D004088 2.7e-09 65.5 65 55.4
Actinidia17088 Actinidia chinensis HOM05D001218 ORTHO05D004088 3.6e-09 65.1 80 50.0
ATR0057G131 Amborella trichopoda HOM05D001218 ORTHO05D004088 3.6e-09 65.1 65 53.8
MELO3C017063.2 Cucumis melo HOM05D001218 ORTHO05D004088 3.6e-09 65.1 65 53.8
Gohir.A02G087100 Gossypium hirsutum HOM05D001218 ORTHO05D004088 3.6e-09 65.1 65 56.9
Gohir.D02G101900 Gossypium hirsutum HOM05D001218 ORTHO05D004088 3.6e-09 65.1 65 56.9
Gorai.005G115600 Gossypium raimondii HOM05D001218 ORTHO05D004088 3.6e-09 65.1 65 56.9
Lj4C3G12 Lonicera japonica HOM05D001218 ORTHO05D004088 3.6e-09 65.1 80 48.8
Psat2g090360 Pisum sativum HOM05D001218 ORTHO05D015696 3.6e-09 65.1 65 50.8
Psat6g112480 Pisum sativum HOM05D001218 ORTHO05D015696 3.6e-09 65.1 65 50.8
VMungo1215G2664 Vigna mungo HOM05D001218 ORTHO05D004088 3.6e-09 65.1 65 56.9
SGA_v2.0_scaffold161G37861 Striga asiatica HOM05D001218 ORTHO05D004088 4.7e-09 64.7 65 55.4
Zm00001eb252630 Zea mays HOM05D001218 ORTHO05D004088 4.7e-09 64.7 65 53.8
Actinidia37903 Actinidia chinensis HOM05D001218 ORTHO05D004088 6.1e-09 64.3 79 48.1
Eucgr.F03611 Eucalyptus grandis HOM05D001218 ORTHO05D004088 6.1e-09 64.3 65 55.4
Oeu042498.1 Olea europaea HOM05D001218 ORTHO05D004088 6.1e-09 64.3 65 56.9
Zm00001eb188910 Zea mays HOM05D001218 ORTHO05D004088 6.1e-09 64.3 65 52.3
HanXRQChr14g0427931 Helianthus annuus HOM05D001218 ORTHO05D004088 8.0e-09 63.9 80 48.8
Hma1.2p1_0450F.1_g155500 Hydrangea macrophylla HOM05D001218 ORTHO05D015696 8.0e-09 63.9 80 50.0
Hma1.2p1_0810F.1_g221990 Hydrangea macrophylla HOM05D001218 ORTHO05D004088 8.0e-09 63.9 80 50.0
Os06g0326400 Oryza sativa ssp. japonica HOM05D001218 ORTHO05D004088 8.0e-09 63.9 65 52.3
CSS0013185 Camellia sinensis var. sinensis HOM05D001218 ORTHO05D004088 1.0e-08 63.5 80 47.5
Hma1.2p1_1530F.1_g289220 Hydrangea macrophylla HOM05D001218 ORTHO05D004088 1.0e-08 63.5 65 55.4
Lsat_1_v5_gn_2_3161 Lactuca sativa HOM05D001218 ORTHO05D004088 1.0e-08 63.5 80 47.5
Psat2g099920 Pisum sativum HOM05D001218 ORTHO05D015696 1.0e-08 63.5 65 49.2
Sabra05G0199700 Salix brachista HOM05D001218 ORTHO05D004088 1.0e-08 63.5 80 46.2
TAR376G0228 Trochodendron aralioides HOM05D001218 ORTHO05D004088 1.0e-08 63.5 80 48.8
ATR0605G031 Amborella trichopoda HOM05D001218 ORTHO05D004088 1.4e-08 63.2 76 48.7
DCAR_017621 Daucus carota HOM05D001218 ORTHO05D004088 1.4e-08 63.2 65 53.8
MBI01_g22962_MAGBIO Magnolia biondii HOM05D001218 ORTHO05D004088 1.4e-08 63.2 80 51.2
Psat6g112440 Pisum sativum HOM05D001218 ORTHO05D015696 1.4e-08 63.2 65 50.8
TAR628G0316 Trochodendron aralioides HOM05D001218 ORTHO05D004088 1.4e-08 63.2 80 48.8
AUR62035185 Chenopodium quinoa HOM05D001218 ORTHO05D004088 1.8e-08 62.8 65 53.8
AUR62043319 Chenopodium quinoa HOM05D001218 ORTHO05D004088 1.8e-08 62.8 65 53.8
PSO170G0003 Papaver somniferum HOM05D001218 ORTHO05D004088 1.8e-08 62.8 76 50.0
Hund01814 Selenicereus undatus HOM05D001218 ORTHO05D004088 1.8e-08 62.8 80 47.5
AagrBONN_evm.TU.Sc2ySwM_228.4948 Anthoceros agrestis HOM05D001218 ORTHO05D004088 2.3e-08 62.4 76 47.4
Aqoxy5G00952 Aquilegia oxysepala HOM05D001218 ORTHO05D004088 2.3e-08 62.4 80 48.8
C01p46640 Brassica napus HOM05D002288 ORTHO05D001029 2.3e-08 62.4 65 55.4
Psat7g194800 Pisum sativum HOM05D001218 ORTHO05D015696 2.3e-08 62.4 75 46.7
Migut.N02993 Erythranthe guttata HOM05D001218 ORTHO05D004088 3.0e-08 62.0 65 53.8
PSO017G6550 Papaver somniferum HOM05D001218 ORTHO05D004088 4.0e-08 61.6 65 53.8
Hund01817 Selenicereus undatus HOM05D001218 ORTHO05D004088 4.0e-08 61.6 80 46.2
HPP92_007461 Vanilla planifolia HOM05D001218 ORTHO05D004088 4.0e-08 61.6 65 52.3
Lsat_1_v5_gn_8_26721 Lactuca sativa HOM05D001218 ORTHO05D004088 5.2e-08 61.2 80 43.8
Psat1g072640 Pisum sativum HOM05D001218 ORTHO05D004088 5.2e-08 61.2 58 60.3
Sed0013544 Sechium edule HOM05D001218 ORTHO05D004088 5.2e-08 61.2 65 52.3
Os02g0714200 Oryza sativa ssp. japonica HOM05D001218 ORTHO05D004088 6.7e-08 60.8 65 50.8
Psat1g136120 Pisum sativum HOM05D001218 ORTHO05D015696 6.7e-08 60.8 74 45.9
ECA233G0383 Erigeron canadensis HOM05D001218 ORTHO05D004088 8.8e-08 60.5 76 46.1
SMO115G0046 Selaginella moellendorffii HOM05D001218 ORTHO05D004088 8.8e-08 60.5 64 53.1
Hma1.2p1_0489F.1_g164180 Hydrangea macrophylla HOM05D001218 ORTHO05D004088 1.1e-07 60.1 80 45.0
CDE05G0435 Ceratophyllum demersum HOM05D001218 ORTHO05D004088 1.5e-07 59.7 65 50.8
Psat0s2691g0160 Pisum sativum HOM05D001218 ORTHO05D015696 1.5e-07 59.7 65 47.7
CDE10G0658 Ceratophyllum demersum HOM05D001218 ORTHO05D004088 2.0e-07 59.3 76 44.7
DCAR_013949 Daucus carota HOM05D001218 ORTHO05D004088 2.0e-07 59.3 80 47.5
Nn6g31597 Nelumbo nucifera HOM05D001218 ORTHO05D004088 2.0e-07 59.3 65 52.3
TAR375G0723 Trochodendron aralioides HOM05D001218 ORTHO05D004088 2.6e-07 58.9 65 52.3
MBI04_g22928_MAGBIO Magnolia biondii HOM05D001218 ORTHO05D004088 3.3e-07 58.5 79 45.6
Zm00001eb354160 Zea mays HOM05D001218 ORTHO05D015696 3.3e-07 58.5 84 41.7
PSO210G6488 Papaver somniferum HOM05D001218 ORTHO05D004088 4.4e-07 58.2 65 50.8
Nn1g08050 Nelumbo nucifera HOM05D001218 ORTHO05D004088 9.7e-07 57.0 65 50.8
Sc02g0009320 Simmondsia chinensis HOM05D001218 ORTHO05D004088 9.7e-07 57.0 65 49.2
HanXRQChr08g0216771 Helianthus annuus HOM05D001218 ORTHO05D004088 1.3e-06 56.6 76 44.7
PSO210G1993 Papaver somniferum HOM05D001218 ORTHO05D004088 2.8e-06 55.5 65 49.2
SEGI_18001 Sequoiadendron giganteum HOM05D001218 ORTHO05D004088 2.8e-06 55.5 65 49.2


User provided reference genes

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