Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C02p24100 Brassica napus HOM05D006421 ORTHO05D008268 1.7e-164 583.2 430 100.0
A01p06150 Brassica napus HOM05D006421 ORTHO05D008268 8.3e-148 527.7 429 85.1
BcaC03g14918 Brassica carinata HOM05D006421 ORTHO05D008268 2.9e-145 519.2 399 91.5
C01p06780 Brassica napus HOM05D006421 ORTHO05D008268 1.6e-138 496.9 429 82.3
BolC1t00672H Brassica oleracea HOM05D006421 ORTHO05D008268 1.6e-138 496.9 429 82.3
BcaC09g52004 Brassica carinata HOM05D006421 ORTHO05D008268 6.0e-138 495.0 429 82.5
AT4G32190 Arabidopsis thaliana HOM05D006421 ORTHO05D008268 1.2e-119 434.1 449 70.6
BcaNung03144 Brassica carinata HOM05D006421 ORTHO05D008268 3.6e-119 432.6 437 75.7
Thhalv10024464m.g Eutrema salsugineum HOM05D006421 ORTHO05D008268 5.4e-115 418.7 454 70.3
AL7G19640 Arabidopsis lyrata HOM05D006421 ORTHO05D008268 5.4e-107 392.1 449 66.1
CARHR240120 Cardamine hirsuta HOM05D006421 ORTHO05D008268 2.7e-106 389.8 455 65.9
Sp7g29980 Schrenkiella parvula HOM05D006421 ORTHO05D008268 1.4e-99 367.5 454 66.1
Carub.0007s0836 Capsella rubella HOM05D006421 ORTHO05D008268 3.0e-97 359.8 450 70.7
Eucgr.C01728 Eucalyptus grandis HOM05D006421 ORTHO05D008268 2.5e-72 276.9 450 51.1
Gohir.A07G028900 Gossypium hirsutum HOM05D006421 ORTHO05D008268 8.5e-68 261.9 451 49.4
FAN27G1287 Fragaria x ananassa HOM05D006421 ORTHO05D008268 7.2e-67 258.8 445 52.4
TWI34G1016 Tripterygium wilfordii HOM05D006421 ORTHO05D008268 2.7e-66 256.9 451 51.4
FAN15G0163 Fragaria x ananassa HOM05D006421 ORTHO05D008268 4.7e-66 256.1 445 51.5
Actinidia15670 Actinidia chinensis HOM05D006421 ORTHO05D008268 3.0e-65 253.4 451 50.3
Duzib187G1366 Durio zibethinus HOM05D006421 ORTHO05D008268 8.8e-65 251.9 455 56.7
THA.LOC104818618 Tarenaya hassleriana HOM05D006421 ORTHO05D008268 5.7e-64 249.2 453 49.7
Gohir.D07G032900 Gossypium hirsutum HOM05D006421 ORTHO05D008268 7.4e-64 248.8 451 48.6
Gorai.001G034500 Gossypium raimondii HOM05D006421 ORTHO05D008268 3.7e-63 246.5 451 48.3
FAN20G2434 Fragaria x ananassa HOM05D006421 ORTHO05D008268 1.8e-62 244.2 446 50.4
FAN24G1512 Fragaria x ananassa HOM05D006421 ORTHO05D008268 5.0e-60 236.1 445 49.9
SalBow4G3177 Salvia bowleyana HOM05D006421 ORTHO05D008268 5.0e-60 236.1 445 49.0
Psat6g029040 Pisum sativum HOM05D006421 ORTHO05D008268 2.7e-58 230.3 457 51.2
Aa31LG2G17740 Aethionema arabicum HOM05D006421 ORTHO05D008268 6.1e-58 229.2 400 59.0
DCAR_001538 Daucus carota HOM05D006421 ORTHO05D008268 2.3e-57 227.3 437 46.2
Migut.A00033 Erythranthe guttata HOM05D006421 ORTHO05D008268 8.8e-57 225.3 454 49.1
Hma1.2p1_0243F.1_g100900 Hydrangea macrophylla HOM05D006421 ORTHO05D008268 7.4e-56 222.2 436 48.6
EL10Ac2g04201 Beta vulgaris HOM05D006421 ORTHO05D008268 8.2e-55 218.8 459 49.7
Oeu053117.1 Olea europaea HOM05D006421 ORTHO05D008268 9.1e-54 215.3 449 46.5
FvH4_2g28941 Fragaria vesca HOM05D006421 ORTHO05D008268 2.2e-52 210.7 445 47.6
Oeu033132.1 Olea europaea HOM05D006421 ORTHO05D008268 6.5e-52 209.1 441 51.7
Cc08_g00500 Coffea canephora HOM05D006421 ORTHO05D008268 2.5e-51 207.2 435 45.3
Thecc.09G023300 Theobroma cacao HOM05D006421 ORTHO05D008268 2.1e-50 204.1 450 50.0
Manes.16G122900 Manihot esculenta HOM05D006421 ORTHO05D008268 4.0e-49 199.9 452 47.8
Rhsim07G0159500 Rhododendron simsii HOM05D006421 ORTHO05D008268 1.5e-48 198.0 452 46.0
Lj8P705T28 Lonicera japonica HOM05D006421 ORTHO05D008268 1.7e-47 194.5 448 47.5
Medtr1g012620 Medicago truncatula HOM05D006421 ORTHO05D008268 4.8e-47 193.0 440 50.5
CiPaw.07G224100 Carya illinoinensis HOM05D006421 ORTHO05D008268 1.1e-46 191.8 446 44.6
Hund04507 Selenicereus undatus HOM05D006421 ORTHO05D008268 1.1e-46 191.8 469 44.8
TAR636G3563 Trochodendron aralioides HOM05D006421 ORTHO05D008268 1.4e-46 191.4 307 56.4
GSVIVG01035871001 Vitis vinifera HOM05D006421 ORTHO05D008268 1.6e-45 188.0 452 45.8
Potri.006G255800 Populus trichocarpa HOM05D006421 ORTHO05D008268 5.9e-45 186.0 453 47.0
Duzib168G2139 Durio zibethinus HOM05D006421 ORTHO05D008268 1.0e-44 185.3 450 45.1
TAR625G1222 Trochodendron aralioides HOM05D006421 ORTHO05D008268 5.0e-44 183.0 245 45.7
arahy.Tifrunner.gnm1.ann1.1F1BFK Arachis hypogaea HOM05D006421 ORTHO05D008268 6.5e-44 182.6 446 45.3
CAN.G117.5 Capsicum annuum HOM05D006421 ORTHO05D008268 6.5e-44 182.6 445 47.9
AUR62031532 Chenopodium quinoa HOM05D006421 ORTHO05D008268 8.5e-44 182.2 462 36.6
arahy.Tifrunner.gnm1.ann1.658XMK Arachis hypogaea HOM05D006421 ORTHO05D008268 1.5e-43 181.4 442 51.1
Actinidia14601 Actinidia chinensis HOM05D006421 ORTHO05D008268 1.2e-42 178.3 308 56.5
TPR.G15679 Trifolium pratense HOM05D006421 ORTHO05D008268 1.2e-42 178.3 455 44.2
Lj5g0021919 Lotus japonicus HOM05D006421 ORTHO05D008268 3.6e-42 176.8 402 54.7
MD15G1126300 Malus domestica HOM05D006421 ORTHO05D008268 6.1e-42 176.0 445 44.0
vmacro05173 Vaccinium macrocarpon HOM05D006421 ORTHO05D008268 1.8e-41 174.5 452 45.8
SGA_v2.0_scaffold20G09108 Striga asiatica HOM05D002695 ORTHO05D002964 5.2e-41 172.9 435 49.2
RcHm_v2.0_Chr6g0297771 Rosa chinensis HOM05D006421 ORTHO05D008268 8.8e-41 172.2 446 43.5
Nitab4.5_0002408g0020 Nicotiana tabacum HOM05D006421 ORTHO05D008268 9.8e-40 168.7 449 44.3
Nn8g39522 Nelumbo nucifera HOM05D006421 ORTHO05D008268 1.3e-39 168.3 459 43.4
COL.COLO4_18870 Corchorus olitorius HOM05D006421 ORTHO05D008268 2.2e-39 167.5 228 46.9
Sopen08g011590 Solanum pennellii HOM05D006421 ORTHO05D008268 3.7e-39 166.8 449 42.5
BraA10t43273Z Brassica rapa HOM05D006421 ORTHO05D008268 1.1e-38 165.2 105 90.5
Solyc08g022030.3 Solanum lycopersicum HOM05D006421 ORTHO05D008268 7.0e-38 162.5 449 42.3
Nitab4.5_0002042g0070 Nicotiana tabacum HOM05D006421 ORTHO05D008268 3.5e-37 160.2 449 43.7
Sabra06G0200100 Salix brachista HOM05D006421 ORTHO05D008268 8.6e-36 155.6 453 45.7
Ciclev10007642m.g Citrus clementina HOM05D006421 ORTHO05D008268 5.5e-35 152.9 311 52.4
Peaxi162Scf01131g00117 Petunia axillaris HOM05D006421 ORTHO05D008268 2.1e-34 151.0 436 51.4
Prupe.1G482200 Prunus persica HOM05D006421 ORTHO05D008268 6.1e-34 149.4 311 52.4
VMungo0647G1945 Vigna mungo HOM05D006421 ORTHO05D008268 3.0e-33 147.1 224 45.1
Haze_21503 Corylus avellana HOM05D006421 ORTHO05D008268 1.2e-32 145.2 454 46.5
ECA246G1400 Erigeron canadensis HOM05D002695 ORTHO05D002964 2.0e-32 144.4 434 39.9
AUR62012410 Chenopodium quinoa HOM05D006421 ORTHO05D008268 2.6e-32 144.1 389 38.6
PSO170G2190 Papaver somniferum HOM05D006421 ORTHO05D008268 3.4e-32 143.7 458 39.7
Sc09g0008160 Simmondsia chinensis HOM05D006421 ORTHO05D008268 4.4e-32 143.3 437 49.0
Cfa013134 Carpinus fangiana HOM05D006421 ORTHO05D008268 4.9e-31 139.8 453 44.8
CANSAT35G0532 Cannabis sativa HOM05D006421 ORTHO05D008268 1.4e-30 138.3 289 55.4
PGSC0003DMG400004306 Solanum tuberosum HOM05D006421 ORTHO05D008268 1.8e-30 137.9 449 40.8
HanXRQChr16g0510771 Helianthus annuus HOM05D006421 ORTHO05D008268 2.0e-29 134.4 435 48.7
QL02p021457 Quercus lobata HOM05D006421 ORTHO05D008268 3.5e-29 133.7 454 46.7
Dinv08633 Davidia involucrata HOM05D006421 ORTHO05D008268 1.3e-28 131.7 450 42.2
MELO3C003706.2 Cucumis melo HOM05D006421 ORTHO05D008268 3.3e-27 127.1 435 42.1
Lsat_1_v5_gn_5_30240 Lactuca sativa HOM05D006421 ORTHO05D008268 3.1e-25 120.6 203 39.4
Ca_13033_v3 Cicer arietinum L. HOM05D006421 ORTHO05D008268 6.8e-25 119.4 451 43.9
Glyma.14G115951 Glycine max HOM05D006421 ORTHO05D008268 5.8e-24 116.3 200 43.0
MSTRG.11610 Avicennia marina HOM05D006421 ORTHO05D008268 7.5e-24 115.9 451 41.0
CSS0048874 Camellia sinensis var. sinensis HOM05D006421 ORTHO05D008268 7.5e-24 115.9 302 49.3
Phvul.001G050600 Phaseolus vulgaris HOM05D006421 ORTHO05D008268 9.8e-24 115.5 454 40.1
PGR031G1896 Punica granatum HOM05D006421 ORTHO05D008268 4.9e-23 113.2 240 37.1
CSS0036831 Camellia sinensis var. sinensis HOM05D006421 ORTHO05D008268 1.6e-21 108.2 304 48.0
SEGI_00734 Sequoiadendron giganteum HOM05D006421 ORTHO05D008268 2.7e-21 107.5 212 34.9
Lalb_Chr24g0402151 Lupinus albus HOM05D006421 ORTHO05D008268 3.5e-21 107.1 430 36.7
Cpa.g.sc217.10 Carica papaya HOM05D006421 ORTHO05D008268 1.0e-20 105.5 445 45.6
Glyma.17G211900 Glycine max HOM05D006421 ORTHO05D008268 2.3e-20 104.4 227 39.2
PSO017G0123 Papaver somniferum HOM05D006421 ORTHO05D008268 1.6e-18 98.2 461 34.5
Potri.018G026300 Populus trichocarpa HOM05D006421 ORTHO05D008268 2.1e-18 97.8 394 29.4
SEGI_28581 Sequoiadendron giganteum HOM05D006421 ORTHO05D008268 3.6e-18 97.1 199 35.2
A03p32460 Brassica napus HOM05D003015 ORTHO05D024548 1.1e-17 95.5 106 63.2
BraA07t31256Z Brassica rapa HOM05D000793 ORTHO05D024548 1.1e-17 95.5 106 63.2
CsaV3_3G046330 Cucumis sativus L. HOM05D006421 ORTHO05D008268 8.9e-17 92.4 410 41.7
Sed0003255 Sechium edule HOM05D006421 ORTHO05D008268 2.0e-16 91.3 443 40.6
ATR0800G069 Amborella trichopoda HOM05D006421 ORTHO05D008268 9.2e-14 82.4 402 46.0
Atru.chr7.2443 Acer truncatum HOM05D006421 ORTHO05D008268 1.2e-13 82.0 200 33.5
FAN15G3016 Fragaria x ananassa HOM05D006421 ORTHO05D008268 2.7e-13 80.9 263 50.6
C02p23990 Brassica napus HOM05D006421 ORTHO05D008268 6.0e-13 79.7 91 57.1
unitig_748.g8080 Utricularia gibba HOM05D006421 ORTHO05D008268 1.5e-11 75.1 392 37.5
Zm00001eb206500 Zea mays HOM05D006421 ORTHO05D008268 2.3e-09 67.8 444 32.9
A07p36910 Brassica napus HOM05D000793 ORTHO05D024548 3.1e-09 67.4 51 74.5
CDE07G0223 Ceratophyllum demersum HOM05D006421 ORTHO05D008268 1.2e-08 65.5 165 52.7
FAN15G3111 Fragaria x ananassa HOM05D006421 ORTHO05D008268 2.6e-08 64.3 126 36.5
Sabra18G0029000 Salix brachista HOM05D006421 ORTHO05D008268 5.8e-08 63.2 146 32.2
C02p24000 Brassica napus HOM05D006421 ORTHO05D008268 9.2e-06 55.8 29 100.0


User provided reference genes

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