Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC03g14888 Brassica carinata HOM05D007313 ORTHO05D005299 1.0e-28 129.4 67 100.0
C02p23620 Brassica napus HOM05D007313 ORTHO05D005299 1.0e-28 129.4 67 100.0
BolC2t08492H Brassica oleracea HOM05D007313 ORTHO05D005299 1.0e-28 129.4 67 100.0
BcaB05g24323 Brassica carinata HOM05D007313 ORTHO05D005299 3.3e-27 124.4 67 94.0
A02p14560 Brassica napus HOM05D007313 ORTHO05D005299 3.3e-27 124.4 67 95.5
BraA02t06526Z Brassica rapa HOM05D007313 ORTHO05D005299 3.3e-27 124.4 67 95.5
A07p32280 Brassica napus HOM05D007313 ORTHO05D005299 9.9e-24 112.8 67 88.1
BraA07t30853Z Brassica rapa HOM05D007313 ORTHO05D005299 9.9e-24 112.8 67 88.1
BcaC08g46215 Brassica carinata HOM05D007313 ORTHO05D005299 1.7e-23 112.1 67 85.1
BolC6t39221H Brassica oleracea HOM05D007313 ORTHO05D005299 1.7e-23 112.1 67 85.1
Sp5g22920 Schrenkiella parvula HOM05D007313 ORTHO05D005299 2.9e-23 111.3 67 85.1
BcaC08g46017 Brassica carinata HOM05D007313 ORTHO05D005299 3.8e-23 110.9 67 86.6
C06p38120 Brassica napus HOM05D007313 ORTHO05D005299 3.8e-23 110.9 67 86.6
BolC6t38909H Brassica oleracea HOM05D007313 ORTHO05D005299 3.8e-23 110.9 67 86.6
BraA07t31073Z Brassica rapa HOM05D007313 ORTHO05D005299 1.4e-22 109.0 67 83.6
Thhalv10019740m.g Eutrema salsugineum HOM05D007313 ORTHO05D005299 2.4e-22 108.2 67 83.6
BcaB03g15385 Brassica carinata HOM05D007313 ORTHO05D005299 5.4e-22 107.1 68 83.8
A07p34460 Brassica napus HOM05D007313 ORTHO05D005299 5.4e-22 107.1 67 82.1
BcaB03g15149 Brassica carinata HOM05D007313 ORTHO05D005299 1.6e-21 105.5 67 82.1
Carub.0002s1441 Capsella rubella HOM05D007313 ORTHO05D005299 3.5e-21 104.4 68 85.3
CARHR060560 Cardamine hirsuta HOM05D007313 ORTHO05D005299 3.5e-21 104.4 68 85.3
AT1G67920 Arabidopsis thaliana HOM05D007313 ORTHO05D005299 1.3e-20 102.4 68 82.4
AL2G26720 Arabidopsis lyrata HOM05D007313 ORTHO05D005299 3.0e-20 101.3 68 80.9
Duzib248G0390 Durio zibethinus HOM05D007313 ORTHO05D005299 1.2e-13 79.3 72 66.7
Carub.0001s2549 Capsella rubella HOM05D007313 ORTHO05D005299 1.0e-12 76.3 73 64.4
Sp1g23170 Schrenkiella parvula HOM05D007313 ORTHO05D005299 1.8e-12 75.5 73 63.0
AL1G40310 Arabidopsis lyrata HOM05D007313 ORTHO05D005299 2.3e-12 75.1 74 66.2
Gohir.A03G114900 Gossypium hirsutum HOM05D007313 ORTHO05D005299 3.0e-12 74.7 54 74.1
Gohir.D02G140300 Gossypium hirsutum HOM05D007313 ORTHO05D005299 3.0e-12 74.7 54 74.1
Gorai.005G156500 Gossypium raimondii HOM05D007313 ORTHO05D005299 3.0e-12 74.7 54 74.1
Duzib268G0019 Durio zibethinus HOM05D007313 ORTHO05D005299 3.9e-12 74.3 73 61.6
BcaB03g12049 Brassica carinata HOM05D007313 ORTHO05D005299 6.7e-12 73.6 74 62.2
CARHR026470 Cardamine hirsuta HOM05D007313 ORTHO05D005299 1.9e-11 72.0 73 61.6
COL.COLO4_16580 Corchorus olitorius HOM05D007313 ORTHO05D005299 3.3e-11 71.2 75 60.0
Gohir.A01G147300 Gossypium hirsutum HOM05D007313 ORTHO05D005299 3.3e-11 71.2 72 62.5
Gohir.D01G140300 Gossypium hirsutum HOM05D007313 ORTHO05D005299 3.3e-11 71.2 72 62.5
Gorai.002G172500 Gossypium raimondii HOM05D007313 ORTHO05D005299 3.3e-11 71.2 72 62.5
Atru.chr11.945 Acer truncatum HOM05D007313 ORTHO05D005299 4.3e-11 70.9 68 60.3
AT1G24600 Arabidopsis thaliana HOM05D007313 ORTHO05D005299 5.6e-11 70.5 73 61.6
Manes.17G083600 Manihot esculenta HOM05D007313 ORTHO05D005299 7.4e-11 70.1 68 64.7
Thecc.02G291900 Theobroma cacao HOM05D007313 ORTHO05D005299 7.4e-11 70.1 63 63.5
Aa31LG7G9440 Aethionema arabicum HOM05D007313 ORTHO05D005299 9.6e-11 69.7 71 62.0
THA.LOC104825566 Tarenaya hassleriana HOM05D007313 ORTHO05D005299 9.6e-11 69.7 61 62.3
A08p26710 Brassica napus HOM05D007313 ORTHO05D005299 2.8e-10 68.2 74 59.5
BraA08t34617Z Brassica rapa HOM05D007313 ORTHO05D005299 2.8e-10 68.2 74 59.5
A07p12350 Brassica napus HOM05D007313 ORTHO05D005299 1.1e-09 66.2 74 59.5
BraA07t29016Z Brassica rapa HOM05D007313 ORTHO05D005299 1.1e-09 66.2 74 59.5
Manes.15G133700 Manihot esculenta HOM05D007313 ORTHO05D005299 1.1e-09 66.2 66 62.1
BcaC06g35248 Brassica carinata HOM05D007313 ORTHO05D005299 1.4e-09 65.9 74 60.8
C07p18250 Brassica napus HOM05D007313 ORTHO05D005299 1.4e-09 65.9 74 60.8
BolC7t42335H Brassica oleracea HOM05D007313 ORTHO05D005299 1.4e-09 65.9 74 60.8
TAR629G3106 Trochodendron aralioides HOM05D007313 ORTHO05D005299 1.4e-09 65.9 66 54.5
BcaB03g14014 Brassica carinata HOM05D007313 ORTHO05D005299 3.1e-09 64.7 74 58.1
Dinv10480 Davidia involucrata HOM05D007313 ORTHO05D005299 3.1e-09 64.7 53 67.9
Potri.008G134100 Populus trichocarpa HOM05D007313 ORTHO05D005299 4.0e-09 64.3 62 58.1
C05p25550 Brassica napus HOM05D007313 ORTHO05D005299 6.9e-09 63.5 71 59.2
BolC5t31282H Brassica oleracea HOM05D007313 ORTHO05D005299 6.9e-09 63.5 71 59.2
Ciclev10017248m.g Citrus clementina HOM05D007313 ORTHO05D005299 6.9e-09 63.5 65 56.9
Potri.010G107200 Populus trichocarpa HOM05D007313 ORTHO05D005299 2.0e-08 62.0 76 52.6
Rhsim09G0090300 Rhododendron simsii HOM05D007313 ORTHO05D005299 2.0e-08 62.0 57 61.4
BcaC05g26505 Brassica carinata HOM05D007313 ORTHO05D005299 2.6e-08 61.6 71 57.7
Cfa015015 Carpinus fangiana HOM05D007313 ORTHO05D005299 5.8e-08 60.5 69 55.1
QL03p035637 Quercus lobata HOM05D007313 ORTHO05D005299 1.3e-07 59.3 70 52.9
Sabra08G0102600 Salix brachista HOM05D007313 ORTHO05D005299 2.2e-07 58.5 59 55.9
A09p38970 Brassica napus HOM05D007313 ORTHO05D005299 2.9e-07 58.2 66 56.1
CANSAT01G0361 Cannabis sativa HOM05D007313 ORTHO05D005299 4.9e-07 57.4 60 58.3
Cpa.g.sc2.206 Carica papaya HOM05D007313 ORTHO05D005299 4.9e-07 57.4 53 66.0
SalBow2G1257 Salvia bowleyana HOM05D007313 ORTHO05D005299 1.4e-06 55.8 69 53.6
CSS0045507 Camellia sinensis var. sinensis HOM05D007313 ORTHO05D005299 2.5e-06 55.1 59 55.9
TAR371G1237 Trochodendron aralioides HOM05D008500 ORTHO05D005299 3.2e-06 54.7 74 50.0
BcaC05g26701 Brassica carinata HOM05D007313 ORTHO05D005299 4.2e-06 54.3 66 56.1
DCAR_023578 Daucus carota HOM05D007313 ORTHO05D005299 4.2e-06 54.3 53 58.5
Sabra10G0078300 Salix brachista HOM05D007313 ORTHO05D005299 4.2e-06 54.3 67 50.7
TAR371G0465 Trochodendron aralioides HOM05D008500 ORTHO05D005299 4.2e-06 54.3 74 50.0
CSS0007506 Camellia sinensis var. sinensis HOM05D007313 ORTHO05D005299 7.1e-06 53.5 59 55.9
Duzib205G0189 Durio zibethinus HOM05D008500 ORTHO05D005299 7.1e-06 53.5 71 54.9
Prupe.1G332700 Prunus persica HOM05D007313 ORTHO05D005299 9.3e-06 53.1 66 56.1


User provided reference genes

Program Settings