Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C02p23530 Brassica napus HOM05D000042 ORTHO05D000028 9.1e-72 273.5 139 100.0
BcaC03g15342 Brassica carinata HOM05D000042 ORTHO05D000028 2.7e-47 192.2 192 60.4
A03p06170 Brassica napus HOM05D000042 ORTHO05D000028 3.2e-40 168.7 165 58.8
BraA03t09951Z Brassica rapa HOM05D000042 ORTHO05D000028 3.2e-40 168.7 165 58.8
BolC3t13219H Brassica oleracea HOM05D000042 ORTHO05D000028 9.2e-40 167.2 165 58.2
C03p07180 Brassica napus HOM05D000042 ORTHO05D000028 1.7e-38 162.9 164 57.9
BcaB01g05337 Brassica carinata HOM05D000042 ORTHO05D000028 4.3e-37 158.3 171 56.1
BcaC01g02408 Brassica carinata HOM05D000042 ORTHO05D000028 5.6e-37 157.9 90 90.0
C03p65590 Brassica napus HOM05D000042 ORTHO05D000028 5.6e-37 157.9 90 90.0
Sp6g30230 Schrenkiella parvula HOM05D000042 ORTHO05D000028 1.8e-35 152.9 165 55.2
C02p29480 Brassica napus HOM05D000042 ORTHO05D000028 3.1e-35 152.1 169 56.8
BolC3t18812H Brassica oleracea HOM05D000042 ORTHO05D000028 5.2e-35 151.4 90 86.7
BcaC04g24253 Brassica carinata HOM05D000042 ORTHO05D000028 7.8e-31 137.5 165 50.9
A10p24560 Brassica napus HOM05D000042 ORTHO05D000028 2.0e-26 122.9 85 76.5
BraA10t44520Z Brassica rapa HOM05D000042 ORTHO05D000028 2.0e-26 122.9 85 76.5
AL6G24410 Arabidopsis lyrata HOM05D000042 ORTHO05D000028 4.4e-26 121.7 85 72.9
Thhalv10014765m.g Eutrema salsugineum HOM05D000042 ORTHO05D000028 4.4e-26 121.7 165 47.3
BcaC04g19080 Brassica carinata HOM05D000042 ORTHO05D000028 7.6e-26 120.9 85 72.9
C09p63310 Brassica napus HOM05D000042 ORTHO05D000028 7.6e-26 120.9 85 72.9
BolC9t59168H Brassica oleracea HOM05D000042 ORTHO05D000028 7.6e-26 120.9 85 72.9
Carub.0006s1197 Capsella rubella HOM05D000042 ORTHO05D000028 1.1e-24 117.1 85 70.6
AT5G13790 Arabidopsis thaliana HOM05D000042 ORTHO05D000028 4.1e-24 115.2 85 72.9
CARHR199650 Cardamine hirsuta HOM05D000042 ORTHO05D000028 8.6e-22 107.5 116 52.6
THA.LOC104819107 Tarenaya hassleriana HOM05D000042 ORTHO05D000028 2.4e-16 89.4 85 55.3
THA.LOC104826694 Tarenaya hassleriana HOM05D000042 ORTHO05D000028 4.3e-13 78.6 87 54.0
Manes.07G011600 Manihot esculenta HOM05D000042 ORTHO05D000028 2.4e-11 72.8 96 45.8
Medtr0003s0590 Medicago truncatula HOM05D000042 ORTHO05D000028 5.3e-11 71.6 111 39.6
QL04p010447 Quercus lobata HOM05D000042 ORTHO05D000028 1.5e-10 70.1 105 41.9
Manes.10G135400 Manihot esculenta HOM05D000042 ORTHO05D000028 3.4e-10 68.9 94 45.7
Gorai.008G112400 Gossypium raimondii HOM05D000042 ORTHO05D000028 4.4e-10 68.6 85 47.1
Gohir.A12G100400 Gossypium hirsutum HOM05D000042 ORTHO05D000028 9.9e-10 67.4 83 47.0
Gohir.D12G103400 Gossypium hirsutum HOM05D000042 ORTHO05D000028 9.9e-10 67.4 83 47.0
Cfa010822 Carpinus fangiana HOM05D000042 ORTHO05D000028 1.3e-09 67.0 107 39.3
Ca_26441_v3 Cicer arietinum L. HOM05D000042 ORTHO05D000028 1.3e-09 67.0 108 39.8
Atru.chr11.2528 Acer truncatum HOM05D000042 ORTHO05D000028 2.2e-09 66.2 100 41.0
Eucgr.G03284 Eucalyptus grandis HOM05D000042 ORTHO05D000028 4.9e-09 65.1 108 45.4
Lj3g0001475 Lotus japonicus HOM05D000042 ORTHO05D000028 6.4e-09 64.7 101 37.6
Potri.009G055700 Populus trichocarpa HOM05D000042 ORTHO05D000028 6.4e-09 64.7 89 43.8
Nn2g15187 Nelumbo nucifera HOM05D000042 ORTHO05D000028 1.1e-08 63.9 109 38.5
Thecc.01G404500 Theobroma cacao HOM05D000042 ORTHO05D000028 1.9e-08 63.2 76 46.1
MBI17_g18123_MAGBIO Magnolia biondii HOM05D000042 ORTHO05D000028 4.2e-08 62.0 107 37.4
MD07G1022500 Malus domestica HOM05D000042 ORTHO05D000028 4.2e-08 62.0 89 41.6
Sabra09G0040800 Salix brachista HOM05D000042 ORTHO05D000028 4.2e-08 62.0 100 40.0
CANSAT80G1550 Cannabis sativa HOM05D000042 ORTHO05D000028 5.4e-08 61.6 107 37.4
TPR.G8340 Trifolium pratense HOM05D000042 ORTHO05D000028 5.4e-08 61.6 107 37.4
Lalb_Chr19g0140231 Lupinus albus HOM05D000042 ORTHO05D000028 1.2e-07 60.5 115 37.4
Ciclev10032519m.g Citrus clementina HOM05D000042 ORTHO05D000028 2.1e-07 59.7 88 42.0
EL10Ac2g04380 Beta vulgaris HOM05D000042 ORTHO05D000028 3.5e-07 58.9 115 36.5
MD02G1301400 Malus domestica HOM05D000042 ORTHO05D000028 7.9e-07 57.8 82 42.7
CsaV3_3G031900 Cucumis sativus L. HOM05D000042 ORTHO05D000028 1.3e-06 57.0 87 40.2
Gohir.D08G162600 Gossypium hirsutum HOM05D000042 ORTHO05D000028 1.7e-06 56.6 68 45.6
Gorai.004G169000 Gossypium raimondii HOM05D000042 ORTHO05D000028 1.7e-06 56.6 68 45.6
PGR031G1523 Punica granatum HOM05D000042 ORTHO05D000028 1.7e-06 56.6 104 42.3
Gohir.A08G141500 Gossypium hirsutum HOM05D000042 ORTHO05D000028 3.9e-06 55.5 68 44.1
Lalb_Chr01g0000501 Lupinus albus HOM05D000042 ORTHO05D000028 3.9e-06 55.5 111 35.1
Nn7g36342 Nelumbo nucifera HOM05D000042 ORTHO05D000028 3.9e-06 55.5 103 36.9
TWI09G1037 Tripterygium wilfordii HOM05D000042 ORTHO05D000028 3.9e-06 55.5 107 38.3
Lalb_Chr04g0263791 Lupinus albus HOM05D000042 ORTHO05D000028 5.1e-06 55.1 92 40.2
TAR636G0038 Trochodendron aralioides HOM05D000042 ORTHO05D000028 5.1e-06 55.1 67 46.3
FAN01G3037 Fragaria x ananassa HOM05D000042 ORTHO05D000028 8.7e-06 54.3 88 38.6


User provided reference genes

Program Settings