Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C02p23310 Brassica napus HOM05D005422 ORTHO05D006578 5.1e-57 224.2 111 100.0
BcaB05g24303 Brassica carinata HOM05D005422 ORTHO05D006578 1.2e-50 203.0 110 90.9
BcaC03g14856 Brassica carinata HOM05D005422 ORTHO05D006578 3.0e-49 198.4 110 87.3
C02p23270 Brassica napus HOM05D005422 ORTHO05D006578 1.5e-48 196.1 110 86.4
BolC2t08466H Brassica oleracea HOM05D005422 ORTHO05D006578 5.6e-48 194.1 110 84.5
BraA02t06501Z Brassica rapa HOM05D005422 ORTHO05D006578 2.8e-47 191.8 110 84.5
A02p14390 Brassica napus HOM05D005422 ORTHO05D006578 8.1e-47 190.3 110 84.5
Sp5g22630 Schrenkiella parvula HOM05D005422 ORTHO05D006578 8.1e-47 190.3 110 81.8
AT1G67630 Arabidopsis thaliana HOM05D005422 ORTHO05D006578 1.9e-43 179.1 111 78.4
Thhalv10018287m.g Eutrema salsugineum HOM05D005422 ORTHO05D006578 2.1e-42 175.6 111 76.6
Carub.0002s1397 Capsella rubella HOM05D005422 ORTHO05D006578 6.0e-42 174.1 111 76.6
CARHR060210 Cardamine hirsuta HOM05D005422 ORTHO05D006578 5.6e-40 167.5 110 77.3
AL2G26300 Arabidopsis lyrata HOM05D005422 ORTHO05D006578 7.3e-40 167.2 111 75.7
Aa31LG4G12020 Aethionema arabicum HOM05D005422 ORTHO05D006578 1.9e-32 142.5 108 68.5
THA.LOC104807895 Tarenaya hassleriana HOM05D005422 ORTHO05D006578 4.5e-29 131.3 110 60.9
Manes.12G015200 Manihot esculenta HOM05D005422 ORTHO05D006578 4.8e-23 111.3 109 52.3
Sabra10G0049200 Salix brachista HOM05D005422 ORTHO05D006578 5.3e-22 107.8 109 53.2
Potri.010G055900 Populus trichocarpa HOM05D005422 ORTHO05D006578 9.0e-22 107.1 109 52.3
Atru.chr11.2256 Acer truncatum HOM05D005422 ORTHO05D006578 7.6e-21 104.0 112 49.1
Cpa.g.sc43.8 Carica papaya HOM05D005422 ORTHO05D006578 1.0e-20 103.6 110 48.2
Atru.chr11.2241 Acer truncatum HOM05D005422 ORTHO05D006578 1.7e-20 102.8 112 48.2
Potri.008G178951 Populus trichocarpa HOM05D005422 ORTHO05D006578 2.2e-20 102.4 110 51.8
GSVIVG01010354001 Vitis vinifera HOM05D005422 ORTHO05D006578 3.8e-20 101.7 110 48.2
Haze_12366 Corylus avellana HOM05D005422 ORTHO05D006578 3.2e-19 98.6 101 47.5
QL03p054803 Quercus lobata HOM05D005422 ORTHO05D006578 3.2e-19 98.6 110 46.4
CiPaw.06G099500 Carya illinoinensis HOM05D005422 ORTHO05D006578 4.2e-19 98.2 101 44.6
Cfa009312 Carpinus fangiana HOM05D005422 ORTHO05D006578 5.5e-19 97.8 101 47.5
Sed0011369 Sechium edule HOM05D005422 ORTHO05D006578 7.1e-19 97.4 101 47.5
Ciclev10030973m.g Citrus clementina HOM05D005422 ORTHO05D006578 2.7e-18 95.5 108 46.3
CANSAT01G0865 Cannabis sativa HOM05D005422 ORTHO05D006578 1.8e-17 92.8 101 47.5
FAN22G2139 Fragaria x ananassa HOM05D005422 ORTHO05D000550 3.0e-17 92.0 108 47.2
vmacro16136 Vaccinium macrocarpon HOM05D005422 ORTHO05D006578 5.1e-17 91.3 101 45.5
MELO3C002044.2 Cucumis melo HOM05D005422 ORTHO05D006578 6.7e-17 90.9 112 44.6
CsaV3_1G006150 Cucumis sativus L. HOM05D005422 ORTHO05D006578 6.7e-17 90.9 101 44.6
Thecc.02G273900 Theobroma cacao HOM05D005422 ORTHO05D006578 8.7e-17 90.5 101 44.6
Aqoxy5G03525 Aquilegia oxysepala HOM05D005422 ORTHO05D006578 1.5e-16 89.7 112 44.6
FAN17G0355 Fragaria x ananassa HOM05D005422 ORTHO05D006578 1.9e-16 89.4 98 48.0
CSS0029300 Camellia sinensis var. sinensis HOM05D005422 ORTHO05D006578 3.3e-16 88.6 101 46.5
FvH4_4g24380 Fragaria vesca HOM05D005422 ORTHO05D006578 3.3e-16 88.6 99 47.5
FAN07G0746 Fragaria x ananassa HOM05D005422 ORTHO05D000550 3.3e-16 88.6 99 47.5
FAN12G3101 Fragaria x ananassa HOM05D005422 ORTHO05D006578 3.3e-16 88.6 99 47.5
PGR102G2427 Punica granatum HOM05D005422 ORTHO05D006578 3.3e-16 88.6 108 44.4
Hund25438 Selenicereus undatus HOM05D005422 ORTHO05D006578 3.3e-16 88.6 103 44.7
Sc11g0000670 Simmondsia chinensis HOM05D005422 ORTHO05D006578 4.3e-16 88.2 107 44.9
ClCG04G011650 Citrullus lanatus HOM05D005422 ORTHO05D006578 1.3e-15 86.7 112 42.9
Eucgr.B03458 Eucalyptus grandis HOM05D005422 ORTHO05D006578 1.3e-15 86.7 109 44.0
CSS0043806 Camellia sinensis var. sinensis HOM05D005422 ORTHO05D006578 2.8e-15 85.5 101 45.5
Actinidia33261 Actinidia chinensis HOM05D005422 ORTHO05D006578 3.7e-15 85.1 101 45.5
BcaC03g14863 Brassica carinata HOM05D000026 ORTHO05D000094 4.8e-15 84.7 43 93.0
Gohir.D05G312350 Gossypium hirsutum HOM05D005422 ORTHO05D006578 6.3e-15 84.3 101 43.6
Gorai.009G333700 Gossypium raimondii HOM05D005422 ORTHO05D006578 6.3e-15 84.3 101 43.6
Dinv14796 Davidia involucrata HOM05D005422 ORTHO05D006578 1.1e-14 83.6 100 44.0
Rhsim12G0105700 Rhododendron simsii HOM05D005422 ORTHO05D006578 1.1e-14 83.6 101 43.6
Gohir.A05G311350 Gossypium hirsutum HOM05D005422 ORTHO05D006578 2.4e-14 82.4 101 43.6
RcHm_v2.0_Chr4g0431221 Rosa chinensis HOM05D005422 ORTHO05D006578 3.1e-14 82.0 99 45.5
AUR62005568 Chenopodium quinoa HOM05D005422 ORTHO05D006578 4.1e-14 81.6 97 45.4
Nn3g16548 Nelumbo nucifera HOM05D005422 ORTHO05D006578 4.1e-14 81.6 100 43.0
Ca_16485_v3 Cicer arietinum L. HOM05D005422 ORTHO05D006578 1.2e-13 80.1 110 40.9
AUR62024162 Chenopodium quinoa HOM05D005422 ORTHO05D006578 1.5e-13 79.7 97 44.3
MD16G1111400 Malus domestica HOM05D005422 ORTHO05D006578 4.5e-13 78.2 109 42.2
TAR374G0226 Trochodendron aralioides HOM05D005422 ORTHO05D006578 4.5e-13 78.2 96 45.8
EL10Ac6g13434 Beta vulgaris HOM05D005422 ORTHO05D006578 7.6e-13 77.4 96 44.8
TPR.G22445 Trifolium pratense HOM05D005422 ORTHO05D006578 1.3e-12 76.6 110 42.7
COL.COLO4_23617 Corchorus olitorius HOM05D005422 ORTHO05D006578 1.7e-12 76.3 101 39.6
MD13G1111800 Malus domestica HOM05D005422 ORTHO05D006578 3.8e-12 75.1 109 42.2
Medtr3g085750 Medicago truncatula HOM05D005422 ORTHO05D006578 6.5e-12 74.3 110 40.9
Oeu056686.1 Olea europaea HOM05D005422 ORTHO05D006578 6.5e-12 74.3 100 41.0
DCAR_013710 Daucus carota HOM05D005422 ORTHO05D006578 1.1e-11 73.6 101 41.6
DCAR_024084 Daucus carota HOM05D005422 ORTHO05D006578 1.4e-11 73.2 101 41.6
Glyma.18G009300 Glycine max HOM05D005422 ORTHO05D006578 1.9e-11 72.8 116 42.2
Psat5g094440 Pisum sativum HOM05D005422 ORTHO05D006578 2.5e-11 72.4 110 40.0
arahy.Tifrunner.gnm1.ann1.3L5TD6 Arachis hypogaea HOM05D005422 ORTHO05D006578 4.2e-11 71.6 101 39.6
arahy.Tifrunner.gnm1.ann1.FGLE2H Arachis hypogaea HOM05D005422 ORTHO05D006578 4.2e-11 71.6 101 39.6
arahy.Tifrunner.gnm1.ann1.T7I6MJ Arachis hypogaea HOM05D005422 ORTHO05D006578 4.2e-11 71.6 101 39.6
PSO063G3748 Papaver somniferum HOM05D005422 ORTHO05D006578 4.2e-11 71.6 99 40.4
PSO782G4908 Papaver somniferum HOM05D005422 ORTHO05D006578 4.2e-11 71.6 99 40.4
Glyma.11G247900 Glycine max HOM05D005422 ORTHO05D006578 5.5e-11 71.2 114 43.0
Prupe.1G233700 Prunus persica HOM05D005422 ORTHO05D006578 7.2e-11 70.9 101 42.6
Hma1.2p1_1340F.1_g276720 Hydrangea macrophylla HOM05D005422 ORTHO05D006578 9.4e-11 70.5 101 39.6
Lj6C821T7 Lonicera japonica HOM05D005422 ORTHO05D006578 1.2e-10 70.1 101 38.6
Peaxi162Scf00128g00843 Petunia axillaris HOM05D005422 ORTHO05D006578 4.6e-10 68.2 102 35.3
Phvul.001G259300 Phaseolus vulgaris HOM05D005422 ORTHO05D006578 6.1e-10 67.8 112 40.2
Cc11_g16560 Coffea canephora HOM05D005422 ORTHO05D006578 7.9e-10 67.4 100 35.0
Lj6g0021706 Lotus japonicus HOM05D005422 ORTHO05D006578 2.3e-09 65.9 108 38.0
Lalb_Chr04g0262801 Lupinus albus HOM05D005422 ORTHO05D006578 3.0e-09 65.5 97 39.2
Nitab4.5_0000240g0030 Nicotiana tabacum HOM05D005422 ORTHO05D006578 2.5e-08 62.4 102 34.3
Nitab4.5_0000581g0110 Nicotiana tabacum HOM05D005422 ORTHO05D006578 3.3e-08 62.0 102 34.3
Lj6g0001538 Lotus japonicus HOM05D005422 ORTHO05D006578 5.7e-08 61.2 108 34.3
Solyc05g014540.3 Solanum lycopersicum HOM05D005422 ORTHO05D006578 5.7e-08 61.2 102 34.3
Sopen05g009590 Solanum pennellii HOM05D005422 ORTHO05D006578 5.7e-08 61.2 102 34.3
PGSC0003DMG400017439 Solanum tuberosum HOM05D005422 ORTHO05D006578 1.7e-07 59.7 102 33.3
SEGI_15215 Sequoiadendron giganteum HOM05D005422 ORTHO05D006578 2.2e-07 59.3 110 33.6
SEGI_16764 Sequoiadendron giganteum HOM05D005422 ORTHO05D006578 2.2e-07 59.3 110 33.6
SEGI_31313 Sequoiadendron giganteum HOM05D005422 ORTHO05D006578 2.2e-07 59.3 110 33.6
HPP92_024300 Vanilla planifolia HOM05D005422 ORTHO05D006578 2.8e-07 58.9 103 35.9
CAN.G163.4 Capsicum annuum HOM05D005422 ORTHO05D006578 3.7e-07 58.5 102 33.3
VMungo1383G2526 Vigna mungo HOM05D005422 ORTHO05D006578 2.4e-06 55.8 112 38.4
Duzib268G1013 Durio zibethinus HOM05D005422 ORTHO05D006578 4.1e-06 55.1 71 39.4
ATR0743G050 Amborella trichopoda HOM05D005422 ORTHO05D006578 5.3e-06 54.7 107 32.7
HPP92_024297 Vanilla planifolia HOM05D005422 ORTHO05D006578 9.1e-06 53.9 52 48.1


User provided reference genes

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