Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C02p22560 Brassica napus HOM05D002270 ORTHO05D002866 5.8e-77 290.8 145 100.0
BcaC03g14803 Brassica carinata HOM05D002270 ORTHO05D002866 1.5e-21 106.7 61 88.5
C02p22490 Brassica napus HOM05D002270 ORTHO05D002866 1.5e-21 106.7 61 88.5
BraA02t06460Z Brassica rapa HOM05D002270 ORTHO05D002866 1.5e-21 106.7 61 88.5
A02p14000 Brassica napus HOM05D002270 ORTHO05D002866 4.5e-21 105.1 61 83.6
Sp5g22070 Schrenkiella parvula HOM05D002270 ORTHO05D002866 5.8e-21 104.8 61 83.6
BcaC05g27865 Brassica carinata HOM05D001285 ORTHO05D000199 2.9e-20 102.4 118 50.0
C05p38670 Brassica napus HOM05D002270 ORTHO05D002866 2.9e-20 102.4 118 50.0
CARHR059570 Cardamine hirsuta HOM05D002270 ORTHO05D002866 2.5e-19 99.4 93 60.2
Carub.0002s1342 Capsella rubella HOM05D002270 ORTHO05D002866 2.7e-18 95.9 60 80.0
Thhalv10017991m.g Eutrema salsugineum HOM05D002270 ORTHO05D002866 6.0e-18 94.7 61 80.3
AL2G25500 Arabidopsis lyrata HOM05D002270 ORTHO05D002866 3.7e-15 85.5 60 75.0
AT1G67120 Arabidopsis thaliana HOM05D002270 ORTHO05D002866 3.7e-15 85.5 60 71.7
Aa31LG2G3520 Aethionema arabicum HOM05D002270 ORTHO05D002866 2.1e-10 69.7 64 57.8
THA.LOC104807245 Tarenaya hassleriana HOM05D002270 ORTHO05D002866 1.5e-08 63.5 60 53.3
Cpa.g.sc30.17 Carica papaya HOM05D002270 ORTHO05D002866 2.0e-08 63.2 54 51.9
BolC4t23855H Brassica oleracea HOM05D004255 ORTHO05D004815 1.4e-06 57.0 51 58.8
Lsat_1_v5_gn_4_95020 Lactuca sativa HOM05D002270 ORTHO05D002866 1.4e-06 57.0 53 49.1
Cc04_g01520 Coffea canephora HOM05D002270 ORTHO05D002866 3.1e-06 55.8 55 47.3
Dinv37885 Davidia involucrata HOM05D002270 ORTHO05D002866 3.1e-06 55.8 50 52.0
Lsat_1_v5_gn_7_1960 Lactuca sativa HOM05D002270 ORTHO05D002866 3.1e-06 55.8 56 48.2
THA.LOC104805560 Tarenaya hassleriana HOM05D002270 ORTHO05D002866 3.1e-06 55.8 59 50.8
Lsat_1_v5_gn_7_1981 Lactuca sativa HOM05D002270 ORTHO05D002866 4.1e-06 55.5 56 46.4
Atru.chr1.3813 Acer truncatum HOM05D002270 ORTHO05D002866 5.3e-06 55.1 74 41.9
Atru.chr1.3816 Acer truncatum HOM05D002270 ORTHO05D002866 6.9e-06 54.7 68 44.1
Haze_16005 Corylus avellana HOM05D002270 ORTHO05D002866 9.1e-06 54.3 54 46.3


User provided reference genes

Program Settings