Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C02p22360 Brassica napus HOM05D012420 ORTHO05D039631 1.1e-113 413.3 208 100.0
C05p34980 Brassica napus HOM05D012420 ORTHO05D019981 4.1e-84 315.1 204 81.9
BcaC03g14787 Brassica carinata HOM05D012420 ORTHO05D039631 6.5e-82 307.8 195 82.6
BraA09t36193Z Brassica rapa HOM05D012420 ORTHO05D019981 2.6e-78 295.8 192 81.2
BcaB06g27920 Brassica carinata HOM05D012420 ORTHO05D019981 7.7e-67 257.7 201 70.1
A02p43840 Brassica napus HOM05D012420 ORTHO05D019981 7.8e-59 231.1 188 68.6
BcaC01g00738 Brassica carinata HOM05D012420 ORTHO05D019981 6.6e-58 228.0 190 68.9
BraA02t06834Z Brassica rapa HOM05D012420 ORTHO05D027447 4.7e-32 142.1 109 71.6
BraA09t36195Z Brassica rapa HOM05D012420 ORTHO05D027447 3.9e-26 122.5 57 98.2
C03p89600 Brassica napus HOM05D012420 ORTHO05D101041 9.9e-22 107.8 67 82.1
A08p03190 Brassica napus HOM05D012420 ORTHO05D027447 2.9e-21 106.3 57 86.0
BcaB04g19548 Brassica carinata HOM05D012420 ORTHO05D019981 3.9e-18 95.9 120 50.0
BcaC08g45606 Brassica carinata HOM05D015886 ORTHO05D017549 6.9e-15 85.1 235 26.0
A03p12660 Brassica napus HOM05D015886 ORTHO05D017549 1.3e-13 80.9 235 25.5
BcaB03g16838 Brassica carinata HOM05D015886 ORTHO05D017549 8.4e-13 78.2 239 25.9
C03p60980 Brassica napus HOM05D006735 ORTHO05D009558 2.1e-11 73.6 227 26.9
BcaC04g20609 Brassica carinata HOM05D028599 ORTHO05D027333 2.3e-10 70.1 208 27.4
A07p02010 Brassica napus HOM05D006735 ORTHO05D009558 2.3e-10 70.1 225 27.6
BolC9t57034H Brassica oleracea HOM05D028599 ORTHO05D027333 2.3e-10 70.1 208 27.4
BraA03t13722Z Brassica rapa HOM05D015886 ORTHO05D017549 5.1e-10 68.9 243 22.6
BolC5t31947H Brassica oleracea HOM05D066666 ORTHO05D042316 1.5e-09 67.4 69 52.2
BcaC09g51914 Brassica carinata HOM05D008982 ORTHO05D011553 1.9e-09 67.0 210 22.9
BraA01t02751Z Brassica rapa HOM05D008982 ORTHO05D011553 2.5e-09 66.6 238 25.6
C09p41560 Brassica napus HOM05D028599 ORTHO05D027333 3.3e-09 66.2 208 26.4
BraA04t16504Z Brassica rapa HOM05D008982 ORTHO05D011553 3.3e-09 66.2 238 25.6
A09p42550 Brassica napus HOM05D006735 ORTHO05D009558 7.4e-09 65.1 230 24.8
BcaNung01756 Brassica carinata HOM05D015886 ORTHO05D017549 2.8e-08 63.2 209 23.9
BcaC04g20691 Brassica carinata HOM05D006735 ORTHO05D009558 3.7e-08 62.8 238 25.2
C07p37620 Brassica napus HOM05D006735 ORTHO05D010262 3.7e-08 62.8 233 24.5
C09p40570 Brassica napus HOM05D006735 ORTHO05D009558 3.7e-08 62.8 238 25.2
C04p61000 Brassica napus HOM05D006735 ORTHO05D009558 4.8e-08 62.4 238 24.8
BcaC03g17872 Brassica carinata HOM05D008982 ORTHO05D011553 6.2e-08 62.0 201 22.4
A09p29490 Brassica napus HOM05D008982 ORTHO05D011553 1.4e-07 60.8 222 22.5
BcaC09g51566 Brassica carinata HOM05D006735 ORTHO05D009558 1.8e-07 60.5 248 23.8
BcaC01g01289 Brassica carinata HOM05D010326 ORTHO05D012728 3.1e-07 59.7 70 38.6
CSS0033511 Camellia sinensis var. sinensis HOM05D000876 ORTHO05D000285 4.0e-07 59.3 210 24.8
BcaC03g15864 Brassica carinata HOM05D006735 ORTHO05D009558 6.9e-07 58.5 242 25.2
BcaC03g18043 Brassica carinata HOM05D006735 ORTHO05D009558 9.0e-07 58.2 217 24.4
BcaC08g45821 Brassica carinata HOM05D006735 ORTHO05D009558 9.0e-07 58.2 242 24.8
C09p21780 Brassica napus HOM05D000496 ORTHO05D000411 9.0e-07 58.2 59 42.4
BraA01t01296Z Brassica rapa HOM05D012501 ORTHO05D014958 9.0e-07 58.2 59 44.1
AL2G13740 Arabidopsis lyrata HOM05D010326 ORTHO05D012728 2.6e-06 56.6 70 35.7
BolC9t58189H Brassica oleracea HOM05D006735 ORTHO05D009558 3.4e-06 56.2 194 25.8
BcaB01g02897 Brassica carinata HOM05D006735 ORTHO05D009558 4.5e-06 55.8 237 23.2
BcaB08g34933 Brassica carinata HOM05D012420 ORTHO05D019981 4.5e-06 55.8 31 90.3
Carub.0011s0008 Capsella rubella HOM05D010326 ORTHO05D012728 5.8e-06 55.5 270 20.0
C02p38090 Brassica napus HOM05D006735 ORTHO05D009558 7.6e-06 55.1 190 22.1
THA.LOC104819338 Tarenaya hassleriana HOM05D004230 ORTHO05D014126 7.6e-06 55.1 239 20.5
BcaC09g51945 Brassica carinata HOM05D006735 ORTHO05D009558 9.9e-06 54.7 67 37.3
CiPaw.15G017800 Carya illinoinensis HOM05D000876 ORTHO05D000285 9.9e-06 54.7 63 42.9


User provided reference genes

Program Settings