Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C02p21530 Brassica napus HOM05D000915 ORTHO05D017702 3.4e-92 341.7 176 100.0
BolC2t08293H Brassica oleracea HOM05D018215 ORTHO05D017702 4.0e-16 89.0 45 100.0
Sp5g20580 Schrenkiella parvula HOM05D000915 ORTHO05D004661 3.4e-15 85.9 114 47.4
A07p32910 Brassica napus HOM05D000915 ORTHO05D004661 7.6e-15 84.7 212 32.5
BolC6t39006H Brassica oleracea HOM05D000915 ORTHO05D004661 3.8e-14 82.4 212 32.5
AT1G65630 Arabidopsis thaliana HOM05D000915 ORTHO05D004661 4.9e-14 82.0 220 30.0
BcaB03g15326 Brassica carinata HOM05D000915 ORTHO05D004661 1.1e-13 80.9 212 32.5
AL2G22670 Arabidopsis lyrata HOM05D000915 ORTHO05D004661 2.4e-13 79.7 220 30.9
AL8G30170 Arabidopsis lyrata HOM05D000915 ORTHO05D004661 2.4e-13 79.7 218 30.3
Thhalv10019569m.g Eutrema salsugineum HOM05D000915 ORTHO05D011770 9.3e-13 77.8 220 30.5
Thhalv10019834m.g Eutrema salsugineum HOM05D000915 ORTHO05D004661 9.3e-13 77.8 220 30.5
Thhalv10019570m.g Eutrema salsugineum HOM05D000915 ORTHO05D004661 2.1e-12 76.6 214 32.2
BraA07t30918Z Brassica rapa HOM05D000915 ORTHO05D004661 5.1e-11 72.0 212 30.7
AL2G22680 Arabidopsis lyrata HOM05D000915 ORTHO05D004661 1.9e-10 70.1 221 29.0
C06p39130 Brassica napus HOM05D000915 ORTHO05D004661 3.7e-09 65.9 97 44.3
C04p55840 Brassica napus HOM05D000915 ORTHO05D004661 1.1e-08 64.3 157 31.8
CARHR268070 Cardamine hirsuta HOM05D000915 ORTHO05D023892 1.1e-08 64.3 218 29.4
Gohir.D12G087400 Gossypium hirsutum HOM05D000915 ORTHO05D004661 1.8e-08 63.5 161 28.6
BcaB06g29614 Brassica carinata HOM05D000915 ORTHO05D004661 2.4e-08 63.2 245 26.9
CARHR057460 Cardamine hirsuta HOM05D000915 ORTHO05D004661 3.1e-08 62.8 219 26.9
BcaC02g08319 Brassica carinata HOM05D000915 ORTHO05D004661 4.0e-08 62.4 157 31.8
ClCG11G011090 Citrullus lanatus HOM05D000915 ORTHO05D004661 5.3e-08 62.0 195 27.7
BolC4t27118H Brassica oleracea HOM05D000915 ORTHO05D004661 6.9e-08 61.6 159 31.4
Zm00001eb288180 Zea mays HOM05D000915 ORTHO05D004661 6.9e-08 61.6 200 27.5
AL2G22660 Arabidopsis lyrata HOM05D000915 ORTHO05D004661 2.6e-07 59.7 220 25.9
BcaC04g20305 Brassica carinata HOM05D000915 ORTHO05D023892 4.5e-07 58.9 123 35.8
Carub.0002s1148 Capsella rubella HOM05D000915 ORTHO05D004661 4.5e-07 58.9 223 26.9
Carub.0008s1501 Capsella rubella HOM05D000915 ORTHO05D004661 4.5e-07 58.9 199 26.6
Ah.04g159450 Amaranthus hybridus HOM05D000915 ORTHO05D004661 9.9e-07 57.8 93 38.7
AUR62000250 Chenopodium quinoa HOM05D000915 ORTHO05D004661 1.7e-06 57.0 93 38.7
Nitab4.5_0001653g0160 Nicotiana tabacum HOM05D000915 ORTHO05D004661 1.7e-06 57.0 109 33.0
Cpa.g.sc108.26 Carica papaya HOM05D000915 ORTHO05D004661 2.2e-06 56.6 95 37.9
MBI10_g16328_MAGBIO Magnolia biondii HOM05D000915 ORTHO05D004661 2.2e-06 56.6 95 38.9
CARHR261420 Cardamine hirsuta HOM05D000915 ORTHO05D004661 2.9e-06 56.2 213 24.9
AUR62006595 Chenopodium quinoa HOM05D000915 ORTHO05D004661 2.9e-06 56.2 93 38.7
Ciclev10014700m.g Citrus clementina HOM05D000915 ORTHO05D004661 4.9e-06 55.5 95 36.8
Manes.12G000700 Manihot esculenta HOM05D000915 ORTHO05D004661 4.9e-06 55.5 108 35.2
Peaxi162Scf00344g00048 Petunia axillaris HOM05D000915 ORTHO05D004661 4.9e-06 55.5 100 36.0
BolC8t47855H Brassica oleracea HOM05D000915 ORTHO05D016583 6.4e-06 55.1 203 25.1
CANSAT64G0733 Cannabis sativa HOM05D000915 ORTHO05D004661 6.4e-06 55.1 100 35.0
CAN.G691.27 Capsicum annuum HOM05D000915 ORTHO05D004661 6.4e-06 55.1 100 35.0
Gorai.008G097600 Gossypium raimondii HOM05D000915 ORTHO05D004661 6.4e-06 55.1 229 24.0
Nn1g09427 Nelumbo nucifera HOM05D000915 ORTHO05D004661 6.4e-06 55.1 95 36.8
Nitab4.5_0012874g0020 Nicotiana tabacum HOM05D000915 ORTHO05D004661 6.4e-06 55.1 109 32.1
ATR0743G105 Amborella trichopoda HOM05D000915 ORTHO05D004661 8.4e-06 54.7 104 33.7
Migut.F02074 Erythranthe guttata HOM05D000915 ORTHO05D004661 8.4e-06 54.7 95 36.8
Gohir.A12G090500 Gossypium hirsutum HOM05D000915 ORTHO05D004661 8.4e-06 54.7 229 24.0


User provided reference genes

Program Settings