Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C02p21250 Brassica napus HOM05D006840 ORTHO05D008588 1.2e-145 520.0 290 100.0
BolC2t08265H Brassica oleracea HOM05D006840 ORTHO05D008588 7.1e-143 510.8 290 98.3
BcaC03g14685 Brassica carinata HOM05D006840 ORTHO05D008588 6.0e-142 507.7 269 98.5
A02p13110 Brassica napus HOM05D006840 ORTHO05D008588 8.6e-141 503.8 269 97.8
BraA02t06367Z Brassica rapa HOM05D006840 ORTHO05D008588 8.6e-141 503.8 269 97.8
BcaB05g24097 Brassica carinata HOM05D006840 ORTHO05D008588 4.4e-137 491.5 269 95.2
Sp5g19910 Schrenkiella parvula HOM05D006840 ORTHO05D008588 3.2e-127 458.8 269 89.2
AT1G65230 Arabidopsis thaliana HOM05D006840 ORTHO05D008588 4.6e-126 454.9 268 85.8
Thhalv10018969m.g Eutrema salsugineum HOM05D006840 ORTHO05D008588 4.6e-126 454.9 269 86.6
Carub.0002s1076 Capsella rubella HOM05D006840 ORTHO05D008588 1.0e-125 453.8 268 85.8
Aa31LG2G2360 Aethionema arabicum HOM05D006840 ORTHO05D008588 3.4e-121 438.7 269 80.7
CARHR056840 Cardamine hirsuta HOM05D006840 ORTHO05D008588 3.4e-121 438.7 269 83.6
AL2G20230 Arabidopsis lyrata HOM05D006840 ORTHO05D008588 9.3e-119 430.6 248 87.1
THA.LOC104821923 Tarenaya hassleriana HOM05D006840 ORTHO05D008588 2.3e-109 399.4 273 75.1
Rhsim06G0181200 Rhododendron simsii HOM05D006840 ORTHO05D008588 3.1e-98 362.5 255 72.2
Gohir.D08G247000 Gossypium hirsutum HOM05D006840 ORTHO05D008588 5.0e-96 355.1 256 70.3
Peaxi162Scf00529g00710 Petunia axillaris HOM05D006840 ORTHO05D008588 1.4e-95 353.6 271 66.4
AUR62000298 Chenopodium quinoa HOM05D006840 ORTHO05D008588 1.2e-94 350.5 275 66.2
CSS0048734 Camellia sinensis var. sinensis HOM05D006840 ORTHO05D008588 2.7e-94 349.4 257 69.3
Gohir.A08G226600 Gossypium hirsutum HOM05D006840 ORTHO05D008588 2.7e-94 349.4 256 68.8
vmacro12041 Vaccinium macrocarpon HOM05D006840 ORTHO05D008588 2.7e-94 349.4 267 69.3
PGR119G2059 Punica granatum HOM05D006840 ORTHO05D008588 1.4e-93 347.1 255 67.5
GSVIVG01019072001 Vitis vinifera HOM05D006840 ORTHO05D008588 1.4e-93 347.1 260 69.2
Duzib106G1767 Durio zibethinus HOM05D006840 ORTHO05D008588 1.8e-93 346.7 264 67.4
AUR62006644 Chenopodium quinoa HOM05D006840 ORTHO05D008588 2.3e-93 346.3 254 68.9
QL01p049413 Quercus lobata HOM05D006840 ORTHO05D008588 3.9e-93 345.5 261 67.8
CiPaw.08G114500 Carya illinoinensis HOM05D006840 ORTHO05D008588 6.7e-93 344.7 273 65.2
EL10Ac4g09995 Beta vulgaris HOM05D006840 ORTHO05D008588 2.6e-92 342.8 254 68.5
Manes.13G004800 Manihot esculenta HOM05D006840 ORTHO05D008588 2.6e-92 342.8 255 67.5
Eucgr.B01421 Eucalyptus grandis HOM05D006840 ORTHO05D008588 7.4e-92 341.3 256 68.0
Gorai.004G263500 Gossypium raimondii HOM05D006840 ORTHO05D008588 1.3e-91 340.5 281 63.7
Sc06g0005020 Simmondsia chinensis HOM05D006840 ORTHO05D008588 8.2e-91 337.8 257 67.7
arahy.Tifrunner.gnm1.ann1.SXK3FV Arachis hypogaea HOM05D006840 ORTHO05D008588 1.4e-90 337.0 246 67.5
Nitab4.5_0000083g0050 Nicotiana tabacum HOM05D006840 ORTHO05D008588 1.8e-90 336.7 255 66.7
TWI75G0198 Tripterygium wilfordii HOM05D006840 ORTHO05D008588 1.8e-90 336.7 272 63.6
Sabra13G0078300 Salix brachista HOM05D006840 ORTHO05D008588 5.3e-90 335.1 276 64.5
Potri.013G085300 Populus trichocarpa HOM05D006840 ORTHO05D008588 1.5e-89 333.6 261 65.5
CANSAT54G1191 Cannabis sativa HOM05D006840 ORTHO05D008588 3.4e-89 332.4 275 63.3
PGSC0003DMG400010521 Solanum tuberosum HOM05D006840 ORTHO05D008588 4.5e-89 332.0 251 64.9
Psat3g102720 Pisum sativum HOM05D006840 ORTHO05D008588 5.9e-89 331.6 273 62.6
TPR.G23771 Trifolium pratense HOM05D006840 ORTHO05D008588 5.9e-89 331.6 257 65.4
Glyma.09G249400 Glycine max HOM05D006840 ORTHO05D008588 7.7e-89 331.3 257 66.9
Glyma.18G243000 Glycine max HOM05D006840 ORTHO05D008588 1.0e-88 330.9 279 63.4
Nitab4.5_0009290g0020 Nicotiana tabacum HOM05D006840 ORTHO05D008588 1.3e-88 330.5 279 62.7
Lj1g0027213 Lotus japonicus HOM05D006840 ORTHO05D008588 1.7e-88 330.1 267 63.7
Phvul.008G053500 Phaseolus vulgaris HOM05D006840 ORTHO05D008588 2.9e-88 329.3 257 65.4
Solyc04g056580.3 Solanum lycopersicum HOM05D006840 ORTHO05D008588 2.9e-88 329.3 251 65.3
TWI36G0520 Tripterygium wilfordii HOM05D006840 ORTHO05D008588 2.9e-88 329.3 263 63.5
Prupe.6G362300 Prunus persica HOM05D006840 ORTHO05D008588 3.8e-88 328.9 251 66.1
Atru.BG.274.p Acer truncatum HOM05D006840 ORTHO05D008588 5.0e-88 328.6 235 68.1
Lj1A575G23 Lonicera japonica HOM05D006840 ORTHO05D008588 5.0e-88 328.6 243 65.8
Hund21908 Selenicereus undatus HOM05D006840 ORTHO05D008588 8.5e-88 327.8 302 59.3
CSS0032443 Camellia sinensis var. sinensis HOM05D006840 ORTHO05D008588 1.4e-87 327.0 232 70.7
Sopen04g025500 Solanum pennellii HOM05D006840 ORTHO05D008588 1.9e-87 326.6 251 65.3
ECA232G2794 Erigeron canadensis HOM05D006840 ORTHO05D008588 3.2e-87 325.9 264 63.6
Lsat_1_v5_gn_0_18400 Lactuca sativa HOM05D006840 ORTHO05D008588 3.2e-87 325.9 255 65.1
MSTRG.27397 Avicennia marina HOM05D006840 ORTHO05D008588 4.2e-87 325.5 255 65.5
SGA_v2.0_scaffold62G21495 Striga asiatica HOM05D006840 ORTHO05D008588 7.2e-87 324.7 268 64.6
CAN.G642.5 Capsicum annuum HOM05D006840 ORTHO05D008588 1.6e-86 323.6 257 63.4
HanXRQChr15g0492181 Helianthus annuus HOM05D006840 ORTHO05D008588 2.1e-86 323.2 255 63.5
Migut.F02113 Erythranthe guttata HOM05D006840 ORTHO05D008588 2.7e-86 322.8 256 64.1
Cc09_g03780 Coffea canephora HOM05D006840 ORTHO05D008588 1.0e-85 320.9 252 65.9
MD04G1245900 Malus domestica HOM05D006840 ORTHO05D008588 3.0e-85 319.3 247 65.6
CsaV3_1G044150 Cucumis sativus L. HOM05D006840 ORTHO05D008588 3.9e-85 318.9 242 64.5
DCAR_028385 Daucus carota HOM05D006840 ORTHO05D008588 3.9e-85 318.9 270 62.2
Oeu020467.1 Olea europaea HOM05D006840 ORTHO05D008588 5.2e-85 318.5 227 70.0
Lalb_Chr03g0038681 Lupinus albus HOM05D006840 ORTHO05D008588 6.7e-85 318.2 257 62.6
RcHm_v2.0_Chr3g0447741 Rosa chinensis HOM05D006840 ORTHO05D008588 6.7e-85 318.2 249 64.7
VMungo1383G2163 Vigna mungo HOM05D006840 ORTHO05D008588 6.7e-85 318.2 258 64.3
MD12G1264100 Malus domestica HOM05D006840 ORTHO05D008588 8.8e-85 317.8 254 64.6
FvH4_6g00410 Fragaria vesca HOM05D006840 ORTHO05D008588 1.1e-84 317.4 261 63.6
ATR0215G001 Amborella trichopoda HOM05D006840 ORTHO05D008588 1.5e-84 317.0 246 63.8
SalBow1G4059 Salvia bowleyana HOM05D006840 ORTHO05D008588 1.5e-84 317.0 236 66.9
MELO3C010008.2 Cucumis melo HOM05D006840 ORTHO05D008588 2.6e-84 316.2 242 64.5
FAN09G3232 Fragaria x ananassa HOM05D006840 ORTHO05D008588 4.4e-84 315.5 261 63.2
Medtr7g080220 Medicago truncatula HOM05D006840 ORTHO05D008588 4.4e-84 315.5 259 62.9
PSO357G0633 Papaver somniferum HOM05D006840 ORTHO05D008588 4.4e-84 315.5 249 64.3
HanXRQChr15g0491491 Helianthus annuus HOM05D006840 ORTHO05D008588 4.8e-83 312.0 256 62.1
Sed0002286 Sechium edule HOM05D006840 ORTHO05D008588 4.8e-83 312.0 256 60.9
PSO170G0121 Papaver somniferum HOM05D006840 ORTHO05D008588 6.3e-83 311.6 249 63.5
arahy.Tifrunner.gnm1.ann1.1ED5VS Arachis hypogaea HOM05D006840 ORTHO05D008588 8.2e-83 311.2 246 63.4
ClCG03G011690 Citrullus lanatus HOM05D006840 ORTHO05D008588 3.5e-81 305.8 265 59.6
Dinv29090 Davidia involucrata HOM05D006840 ORTHO05D008588 2.5e-79 299.7 223 68.2
Thecc.05G192600 Theobroma cacao HOM05D006840 ORTHO05D008588 7.2e-79 298.1 239 64.4
Os01g0912700 Oryza sativa ssp. japonica HOM05D006840 ORTHO05D008588 1.6e-78 297.0 241 62.2
Cfa006254 Carpinus fangiana HOM05D006840 ORTHO05D008588 4.7e-78 295.4 224 67.0
Haze_04572 Corylus avellana HOM05D006840 ORTHO05D008588 8.0e-78 294.7 235 64.7
HPP92_000447 Vanilla planifolia HOM05D006840 ORTHO05D008588 4.4e-76 288.9 277 54.9
Nn7g37259 Nelumbo nucifera HOM05D006840 ORTHO05D008588 9.7e-76 287.7 283 57.6
Aqoxy5G00025 Aquilegia oxysepala HOM05D006840 ORTHO05D008588 3.7e-75 285.8 206 68.0
Ca_07995_v3 Cicer arietinum L. HOM05D006840 ORTHO05D008588 7.7e-73 278.1 236 61.4
Zm00001eb365000 Zea mays HOM05D006840 ORTHO05D008588 1.3e-72 277.3 242 59.9
CDE02G0188 Ceratophyllum demersum HOM05D006840 ORTHO05D008588 3.8e-72 275.8 222 65.3
Cpa.g.sc39.39 Carica papaya HOM05D006840 ORTHO05D008588 1.9e-71 273.5 274 56.6
Ciclev10013335m.g Citrus clementina HOM05D006840 ORTHO05D008588 5.5e-71 271.9 254 58.7
FAN14G4782 Fragaria x ananassa HOM05D006840 ORTHO05D008588 1.2e-70 270.8 230 62.2
FAN02G1048 Fragaria x ananassa HOM05D006840 ORTHO05D008588 4.7e-70 268.9 230 61.7
Lj1A595G27 Lonicera japonica HOM05D006840 ORTHO05D008588 4.7e-70 268.9 293 51.5
FAN05G5535 Fragaria x ananassa HOM05D006840 ORTHO05D008588 1.4e-69 267.3 230 61.7
SMO353G0271 Selaginella moellendorffii HOM05D006840 ORTHO05D008588 1.2e-65 254.2 247 52.6
Actinidia31085 Actinidia chinensis HOM05D006840 ORTHO05D008588 2.0e-65 253.4 179 70.9
Mapoly0031s0189 Marchantia polymorpha HOM05D006840 ORTHO05D008588 2.5e-63 246.5 237 51.9
Pp3c9_3810 Physcomitrium patens HOM05D006840 ORTHO05D008588 2.3e-61 240.0 248 48.8
MBI19_g03256_MAGBIO Magnolia biondii HOM05D006840 ORTHO05D008588 5.7e-60 235.3 239 55.6
unitig_22.g5732 Utricularia gibba HOM05D006840 ORTHO05D008588 1.3e-59 234.2 229 55.9
AagrBONN_evm.TU.Sc2ySwM_228.2548 Anthoceros agrestis HOM05D006840 ORTHO05D008588 7.5e-52 208.4 243 49.0
Pp3c15_10950 Physcomitrium patens HOM05D006840 ORTHO05D008588 7.0e-50 201.8 223 48.4
MBI07_g00615_MAGBIO Magnolia biondii HOM05D006840 ORTHO05D008588 3.5e-49 199.5 148 69.6
SEGI_09257 Sequoiadendron giganteum HOM05D006840 ORTHO05D008588 1.1e-47 194.5 178 56.2
CBR_g8822 Chara braunii HOM05D006840 ORTHO05D008588 2.2e-43 180.3 224 46.0
MCO02G353 Micromonas commoda HOM05D006840 ORTHO05D008588 7.8e-25 118.6 223 35.0
SEGI_35940 Sequoiadendron giganteum HOM05D006840 ORTHO05D008588 7.6e-20 102.1 86 61.6
Actinidia34706 Actinidia chinensis HOM05D006840 ORTHO05D008588 2.4e-18 97.1 121 47.1
Cre12.g536800 Chlamydomonas reinhardtii HOM05D006840 ORTHO05D008588 8.7e-16 88.6 226 29.2
Zm00001eb424130 Zea mays HOM05D006840 ORTHO05D008588 2.1e-14 84.0 72 56.9
Zm00001eb424170 Zea mays HOM05D006840 ORTHO05D008588 2.1e-14 84.0 72 56.9
PRCOL_00007103 Prasinoderma coloniale HOM05D006840 ORTHO05D008588 3.8e-11 73.2 228 28.5


User provided reference genes

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