Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C02p21170 Brassica napus HOM05D006147 ORTHO05D007501 1.0e-82 310.1 164 100.0
BolC2t08257H Brassica oleracea HOM05D006147 ORTHO05D007501 1.4e-66 256.5 218 71.1
C09p25880 Brassica napus HOM05D006147 ORTHO05D007501 5.4e-39 164.9 156 63.5
BolC9t55495H Brassica oleracea HOM05D006147 ORTHO05D007501 1.6e-38 163.3 156 62.8
BraA07t28491Z Brassica rapa HOM05D006147 ORTHO05D007501 1.4e-26 123.6 135 62.2
AL4G10420 Arabidopsis lyrata HOM05D006147 ORTHO05D007501 4.0e-26 122.1 114 63.2
AT2G21280 Arabidopsis thaliana HOM05D006147 ORTHO05D007501 4.0e-26 122.1 114 63.2
Carub.0004s0032 Capsella rubella HOM05D006147 ORTHO05D007501 4.0e-26 122.1 114 63.2
BcaC02g08802 Brassica carinata HOM05D006147 ORTHO05D007501 5.2e-26 121.7 114 63.2
A04p16060 Brassica napus HOM05D006147 ORTHO05D007501 5.2e-26 121.7 114 63.2
C04p50520 Brassica napus HOM05D006147 ORTHO05D007501 5.2e-26 121.7 114 63.2
BolC4t26650H Brassica oleracea HOM05D006147 ORTHO05D007501 5.2e-26 121.7 114 63.2
Sp4g00470 Schrenkiella parvula HOM05D006147 ORTHO05D007501 6.8e-26 121.3 114 63.2
Thhalv10000221m.g Eutrema salsugineum HOM05D006147 ORTHO05D007501 2.0e-25 119.8 101 68.3
CARHR112150 Cardamine hirsuta HOM05D006147 ORTHO05D007501 5.8e-25 118.2 151 53.6
Aa31LG7G15210 Aethionema arabicum HOM05D006147 ORTHO05D007501 8.3e-24 114.4 154 51.9
A07p07030 Brassica napus HOM05D006147 ORTHO05D007501 7.1e-23 111.3 125 59.2
vmacro17420 Vaccinium macrocarpon HOM05D006147 ORTHO05D007501 1.2e-22 110.5 114 55.3
Gohir.D02G220700 Gossypium hirsutum HOM05D006147 ORTHO05D007501 2.7e-22 109.4 114 56.1
CANSAT11G2690 Cannabis sativa HOM05D006147 ORTHO05D007501 4.6e-22 108.6 114 56.1
PGSC0003DMG402031287 Solanum tuberosum HOM05D006147 ORTHO05D007501 4.6e-22 108.6 114 56.1
BcaC03g14677 Brassica carinata HOM05D006147 ORTHO05D007501 6.0e-22 108.2 86 70.9
Sabra09G0095800 Salix brachista HOM05D006147 ORTHO05D007501 6.0e-22 108.2 131 51.9
Ca_20936_v3 Cicer arietinum L. HOM05D006147 ORTHO05D007501 1.0e-21 107.5 114 56.1
Medtr4g072040 Medicago truncatula HOM05D006147 ORTHO05D007501 1.0e-21 107.5 114 56.1
PSO210G6769 Papaver somniferum HOM05D006147 ORTHO05D007501 1.0e-21 107.5 114 55.3
Solyc09g091970.4 Solanum lycopersicum HOM05D006147 ORTHO05D007501 1.0e-21 107.5 131 51.9
Sopen09g034870 Solanum pennellii HOM05D006147 ORTHO05D007501 1.3e-21 107.1 131 51.9
CAN.G1635.6 Capsicum annuum HOM05D006147 ORTHO05D007501 1.7e-21 106.7 114 55.3
Cpa.g.sc150.15 Carica papaya HOM05D006147 ORTHO05D007501 1.7e-21 106.7 114 55.3
COL.COLO4_26048 Corchorus olitorius HOM05D006147 ORTHO05D007501 1.7e-21 106.7 114 55.3
Gohir.A03G199400 Gossypium hirsutum HOM05D006147 ORTHO05D007501 1.7e-21 106.7 114 55.3
Gorai.005G248600 Gossypium raimondii HOM05D006147 ORTHO05D007501 1.7e-21 106.7 114 55.3
Rhsim05G0068100 Rhododendron simsii HOM05D006147 ORTHO05D007501 1.7e-21 106.7 114 54.4
CSS0033675 Camellia sinensis var. sinensis HOM05D006147 ORTHO05D007501 3.0e-21 105.9 114 54.4
Ciclev10028728m.g Citrus clementina HOM05D006147 ORTHO05D007501 3.0e-21 105.9 131 51.1
Lj5C189G13 Lonicera japonica HOM05D006147 ORTHO05D007501 3.0e-21 105.9 114 55.3
Manes.04G083100 Manihot esculenta HOM05D006147 ORTHO05D007501 3.9e-21 105.5 145 49.0
Potri.009G124800 Populus trichocarpa HOM05D006147 ORTHO05D007501 3.9e-21 105.5 131 50.4
TAR628G0064 Trochodendron aralioides HOM05D006147 ORTHO05D007501 3.9e-21 105.5 145 49.0
Nitab4.5_0001154g0060 Nicotiana tabacum HOM05D006147 ORTHO05D007501 5.1e-21 105.1 114 55.3
Nitab4.5_0001370g0020 Nicotiana tabacum HOM05D006147 ORTHO05D007501 5.1e-21 105.1 114 55.3
CSS0016386 Camellia sinensis var. sinensis HOM05D006147 ORTHO05D007501 6.6e-21 104.8 114 53.5
Peaxi162Scf00684g00123 Petunia axillaris HOM05D006147 ORTHO05D007501 6.6e-21 104.8 114 55.3
Thecc.02G074800 Theobroma cacao HOM05D006147 ORTHO05D007501 6.6e-21 104.8 114 53.5
Aqoxy6G02357 Aquilegia oxysepala HOM05D006147 ORTHO05D007501 8.6e-21 104.4 114 54.4
CsaV3_7G000410 Cucumis sativus L. HOM05D006147 ORTHO05D007501 8.6e-21 104.4 114 53.5
ECA233G5423 Erigeron canadensis HOM05D006147 ORTHO05D001140 8.6e-21 104.4 114 55.3
Eucgr.G01732 Eucalyptus grandis HOM05D006147 ORTHO05D007501 8.6e-21 104.4 154 46.8
Sed0012779 Sechium edule HOM05D006147 ORTHO05D007501 8.6e-21 104.4 114 52.6
Actinidia02248 Actinidia chinensis HOM05D006147 ORTHO05D007501 1.1e-20 104.0 114 54.4
arahy.Tifrunner.gnm1.ann1.JUX7JJ Arachis hypogaea HOM05D006147 ORTHO05D007501 1.1e-20 104.0 150 46.0
arahy.Tifrunner.gnm1.ann1.S6V2XE Arachis hypogaea HOM05D006147 ORTHO05D007501 1.1e-20 104.0 150 46.0
Glyma.12G036900 Glycine max HOM05D006147 ORTHO05D007501 1.1e-20 104.0 114 52.6
Sc18g0005390 Simmondsia chinensis HOM05D006147 ORTHO05D007501 1.1e-20 104.0 114 54.4
TPR.G28159 Trifolium pratense HOM05D006147 ORTHO05D007501 1.1e-20 104.0 114 54.4
Migut.N01278 Erythranthe guttata HOM05D006147 ORTHO05D007501 1.5e-20 103.6 114 53.5
Lj3g0027328 Lotus japonicus HOM05D006147 ORTHO05D007501 1.5e-20 103.6 114 52.6
Prupe.8G083600 Prunus persica HOM05D006147 ORTHO05D007501 1.5e-20 103.6 114 53.5
Cfa005114 Carpinus fangiana HOM05D006147 ORTHO05D007501 1.9e-20 103.2 145 48.3
CiPaw.05G073500 Carya illinoinensis HOM05D006147 ORTHO05D007501 1.9e-20 103.2 145 48.3
AUR62010384 Chenopodium quinoa HOM05D006147 ORTHO05D007501 1.9e-20 103.2 110 53.6
AUR62016834 Chenopodium quinoa HOM05D006147 ORTHO05D007501 1.9e-20 103.2 149 46.3
MD05G1055500 Malus domestica HOM05D006147 ORTHO05D007501 1.9e-20 103.2 114 53.5
Haze_02237 Corylus avellana HOM05D006147 ORTHO05D007501 2.5e-20 102.8 145 48.3
Psat7g138880 Pisum sativum HOM05D006147 ORTHO05D007501 2.5e-20 102.8 114 53.5
Hund00177 Selenicereus undatus HOM05D006147 ORTHO05D007501 2.5e-20 102.8 114 53.5
Hund00185 Selenicereus undatus HOM05D006147 ORTHO05D007501 2.5e-20 102.8 114 53.5
Atru.chr5.3146 Acer truncatum HOM05D006147 ORTHO05D007501 3.3e-20 102.4 114 53.5
Lalb_Chr03g0025341 Lupinus albus HOM05D006147 ORTHO05D007501 3.3e-20 102.4 114 51.8
QL11p046465 Quercus lobata HOM05D006147 ORTHO05D007501 3.3e-20 102.4 145 48.3
RcHm_v2.0_Chr6g0267981 Rosa chinensis HOM05D006147 ORTHO05D007501 3.3e-20 102.4 114 53.5
SalBow3G3875 Salvia bowleyana HOM05D006147 ORTHO05D007501 3.3e-20 102.4 114 53.5
SGA_v2.0_scaffold80G25875 Striga asiatica HOM05D006147 ORTHO05D007501 3.3e-20 102.4 110 55.5
HPP92_002502 Vanilla planifolia HOM05D006147 ORTHO05D007501 3.3e-20 102.4 114 52.6
MELO3C002785.2 Cucumis melo HOM05D006147 ORTHO05D007501 4.3e-20 102.1 97 58.8
Glyma.11G110000 Glycine max HOM05D006147 ORTHO05D007501 4.3e-20 102.1 114 52.6
Phvul.011G038600 Phaseolus vulgaris HOM05D006147 ORTHO05D007501 4.3e-20 102.1 114 52.6
VMungo1127G0575 Vigna mungo HOM05D006147 ORTHO05D007501 4.3e-20 102.1 114 52.6
EL10Ac9g21633 Beta vulgaris HOM05D006147 ORTHO05D007501 5.6e-20 101.7 114 50.9
Oeu055635.1 Olea europaea HOM05D006147 ORTHO05D007501 5.6e-20 101.7 114 53.5
MD10G1062800 Malus domestica HOM05D006147 ORTHO05D007501 9.5e-20 100.9 114 52.6
Duzib248G0035 Durio zibethinus HOM05D006147 ORTHO05D007501 1.2e-19 100.5 154 42.2
FAN27G3378 Fragaria x ananassa HOM05D006147 ORTHO05D007501 1.2e-19 100.5 114 52.6
GSVIVG01024169001 Vitis vinifera HOM05D006147 ORTHO05D007501 1.2e-19 100.5 114 51.8
TWI31G1450 Tripterygium wilfordii HOM05D006147 ORTHO05D007501 1.6e-19 100.1 114 50.9
FAN15G0109 Fragaria x ananassa HOM05D006147 ORTHO05D007501 2.1e-19 99.8 114 51.8
PGR042G0282 Punica granatum HOM05D006147 ORTHO05D007501 2.1e-19 99.8 155 45.8
ClCG02G004540 Citrullus lanatus HOM05D006147 ORTHO05D007501 2.8e-19 99.4 114 50.9
THA.LOC104804110 Tarenaya hassleriana HOM05D006147 ORTHO05D007501 4.7e-19 98.6 115 51.3
ATR0149G025 Amborella trichopoda HOM05D006147 ORTHO05D007501 1.1e-18 97.4 150 46.0
Zm00001eb259680 Zea mays HOM05D006147 ORTHO05D007501 1.1e-18 97.4 115 53.0
unitig_899.g15602 Utricularia gibba HOM05D006147 ORTHO05D007501 1.4e-18 97.1 114 50.0
Lsat_1_v5_gn_8_127980 Lactuca sativa HOM05D006147 ORTHO05D007501 4.0e-18 95.5 109 54.1
DCAR_003686 Daucus carota HOM05D006147 ORTHO05D007501 6.8e-18 94.7 114 50.0
Os02g0834700 Oryza sativa ssp. japonica HOM05D006147 ORTHO05D007501 6.8e-18 94.7 115 52.2
Dinv41999 Davidia involucrata HOM05D006147 ORTHO05D007501 8.9e-18 94.4 74 66.2
CDE02G0092 Ceratophyllum demersum HOM05D006147 ORTHO05D007501 2.0e-17 93.2 150 43.3
Cc02_g16890 Coffea canephora HOM05D006147 ORTHO05D007501 7.6e-17 91.3 57 77.2
arahy.Tifrunner.gnm1.ann1.KZ1FWN Arachis hypogaea HOM05D006147 ORTHO05D007501 2.2e-16 89.7 67 67.2
arahy.Tifrunner.gnm1.ann1.B04QBU Arachis hypogaea HOM05D006147 ORTHO05D007501 2.9e-16 89.4 74 63.5
SMO146G0042 Selaginella moellendorffii HOM05D006147 ORTHO05D007501 5.4e-15 85.1 97 47.4
Pp3c7_11090 Physcomitrium patens HOM05D006147 ORTHO05D007501 2.7e-14 82.8 101 47.5
Pp3c7_11100 Physcomitrium patens HOM05D006147 ORTHO05D007501 2.7e-14 82.8 101 47.5
Mapoly0021s0030 Marchantia polymorpha HOM05D006147 ORTHO05D007501 6.0e-14 81.6 114 42.1
arahy.Tifrunner.gnm1.ann1.63XKYH Arachis hypogaea HOM05D006147 ORTHO05D007501 1.1e-12 77.4 93 47.3
PSO170G3006 Papaver somniferum HOM05D006147 ORTHO05D007501 1.6e-11 73.6 101 45.5
Cre05.g233305 Chlamydomonas reinhardtii HOM05D006147 ORTHO05D007501 2.1e-11 73.2 115 39.1
MELO3C028749.2 Cucumis melo HOM05D006147 ORTHO05D007501 3.6e-11 72.4 42 81.0
MCO05G212 Micromonas commoda HOM05D006147 ORTHO05D007501 3.6e-11 72.4 118 37.3
PRCOL_00000238 Prasinoderma coloniale HOM05D006147 ORTHO05D007501 5.2e-10 68.6 115 39.1
Nn6g32256 Nelumbo nucifera HOM05D006147 ORTHO05D007501 9.9e-09 64.3 48 66.7
MCO16G248 Micromonas commoda HOM05D006147 ORTHO05D007501 2.4e-07 59.7 116 37.1


User provided reference genes

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