Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C02p20850 Brassica napus HOM05D007169 ORTHO05D007243 1.3e-137 493.0 250 100.0
BolC2t08225H Brassica oleracea HOM05D007169 ORTHO05D007243 1.2e-135 486.5 249 98.4
BcaC03g14651 Brassica carinata HOM05D007169 ORTHO05D007243 6.1e-135 484.2 249 98.0
A02p12790 Brassica napus HOM05D007169 ORTHO05D007243 1.0e-129 466.8 249 96.0
BraA02t06336Z Brassica rapa HOM05D007169 ORTHO05D007243 1.0e-129 466.8 249 96.0
BcaB05g24052 Brassica carinata HOM05D007169 ORTHO05D007243 1.5e-125 453.0 252 92.9
Sp6g12560 Schrenkiella parvula HOM05D007169 ORTHO05D007243 5.7e-117 424.5 251 87.3
SpUn0015_0080 Schrenkiella parvula HOM05D007169 ORTHO05D007243 5.7e-117 424.5 251 87.3
SpUn0039_0020 Schrenkiella parvula HOM05D007169 ORTHO05D007243 5.7e-117 424.5 251 87.3
Thhalv10014456m.g Eutrema salsugineum HOM05D007169 ORTHO05D007243 5.9e-114 414.5 252 84.9
AT5G50410 Arabidopsis thaliana HOM05D007169 ORTHO05D007243 1.7e-108 396.4 255 82.4
Aa31LG3G6930 Aethionema arabicum HOM05D007169 ORTHO05D007243 8.3e-108 394.0 247 83.0
AL8G24630 Arabidopsis lyrata HOM05D007169 ORTHO05D007243 1.1e-107 393.7 254 82.7
Carub.0008s1052 Capsella rubella HOM05D007169 ORTHO05D007243 6.0e-106 387.9 254 81.1
THA.LOC104803148 Tarenaya hassleriana HOM05D007169 ORTHO05D007243 4.7e-87 325.1 253 69.6
CARHR257950 Cardamine hirsuta HOM05D007169 ORTHO05D007243 2.2e-84 316.2 252 69.0
Cpa.g.sc13.118 Carica papaya HOM05D007169 ORTHO05D007243 9.3e-75 284.3 243 61.7
Thecc.03G128900 Theobroma cacao HOM05D007169 ORTHO05D007243 2.4e-70 269.6 247 59.5
Duzib068G0521 Durio zibethinus HOM05D007169 ORTHO05D007243 7.6e-69 264.6 248 58.5
Gohir.D09G247400 Gossypium hirsutum HOM05D007169 ORTHO05D007243 1.6e-66 256.9 247 56.7
Gorai.006G271900 Gossypium raimondii HOM05D007169 ORTHO05D007243 1.6e-66 256.9 247 56.7
Gohir.A09G246900 Gossypium hirsutum HOM05D007169 ORTHO05D007243 4.6e-66 255.4 244 57.0
Ciclev10018838m.g Citrus clementina HOM05D003858 ORTHO05D005878 1.0e-65 254.2 227 59.0
Sabra15G0116800 Salix brachista HOM05D007169 ORTHO05D007243 1.5e-64 250.4 251 53.8
Manes.01G190300 Manihot esculenta HOM05D007169 ORTHO05D007243 1.3e-63 247.3 244 55.7
TWI23G0849 Tripterygium wilfordii HOM05D007169 ORTHO05D007243 1.3e-63 247.3 255 54.9
Potri.015G096000 Populus trichocarpa HOM05D007169 ORTHO05D007243 6.2e-63 245.0 233 55.8
Atru.chr9.1127 Acer truncatum HOM05D007169 ORTHO05D007243 2.4e-62 243.0 233 56.7
Potri.012G097500 Populus trichocarpa HOM05D007169 ORTHO05D007243 2.6e-61 239.6 247 53.8
arahy.Tifrunner.gnm1.ann1.NVZ1RT Arachis hypogaea HOM05D007169 ORTHO05D007243 3.2e-59 232.6 219 57.1
arahy.Tifrunner.gnm1.ann1.ZT3MCZ Arachis hypogaea HOM05D007169 ORTHO05D007243 3.2e-59 232.6 219 57.1
Lj1g0026378 Lotus japonicus HOM05D007169 ORTHO05D007243 3.2e-59 232.6 217 58.1
CiPaw.12G042700 Carya illinoinensis HOM05D007169 ORTHO05D007243 1.2e-58 230.7 247 51.0
CsaV3_1G009620 Cucumis sativus L. HOM05D007169 ORTHO05D007243 1.2e-58 230.7 250 51.2
Phvul.009G166500 Phaseolus vulgaris HOM05D007169 ORTHO05D007243 1.2e-58 230.7 219 57.1
FvH4_5g08300 Fragaria vesca HOM05D007169 ORTHO05D007243 3.5e-58 229.2 216 56.0
FAN04G2393 Fragaria x ananassa HOM05D007169 ORTHO05D007243 4.6e-58 228.8 225 54.7
Prupe.5G151300 Prunus persica HOM05D007169 ORTHO05D007243 7.9e-58 228.0 228 54.4
Eucgr.K02727 Eucalyptus grandis HOM05D007169 ORTHO05D007243 1.3e-57 227.3 230 50.9
Ca_16044_v3 Cicer arietinum L. HOM05D007169 ORTHO05D007243 1.8e-57 226.9 225 53.8
ClCG03G003730 Citrullus lanatus HOM05D007169 ORTHO05D007243 1.8e-57 226.9 253 51.0
Gorai.004G276100 Gossypium raimondii HOM05D007169 ORTHO05D007243 3.0e-57 226.1 208 57.2
RcHm_v2.0_Chr7g0190221 Rosa chinensis HOM05D007169 ORTHO05D007243 3.9e-57 225.7 230 51.7
MELO3C002358.2 Cucumis melo HOM05D007169 ORTHO05D007243 5.1e-57 225.3 267 48.3
Glyma.06G170200 Glycine max HOM05D007169 ORTHO05D007243 9.6e-56 221.1 243 50.6
Lalb_Chr08g0237141 Lupinus albus HOM05D007169 ORTHO05D007243 9.6e-56 221.1 218 55.0
Psat5g051240 Pisum sativum HOM05D007169 ORTHO05D007243 1.3e-55 220.7 232 52.6
FAN18G0310 Fragaria x ananassa HOM05D007169 ORTHO05D007243 2.8e-55 219.5 222 54.5
PGR044G0546 Punica granatum HOM05D007169 ORTHO05D007243 4.8e-55 218.8 221 50.2
QL10p002966 Quercus lobata HOM05D007169 ORTHO05D007243 4.8e-55 218.8 251 49.8
TPR.G14220 Trifolium pratense HOM05D007169 ORTHO05D007243 8.2e-55 218.0 231 50.6
Sed0023866 Sechium edule HOM05D007169 ORTHO05D007243 1.8e-54 216.9 232 52.6
Medtr3g099350 Medicago truncatula HOM05D007169 ORTHO05D007243 7.6e-53 211.5 234 50.9
RhsimUnG0231000 Rhododendron simsii HOM05D007169 ORTHO05D007243 1.4e-51 207.2 237 49.4
MD06G1142100 Malus domestica HOM05D007169 ORTHO05D007243 3.2e-51 206.1 260 45.0
Sed0005692 Sechium edule HOM05D007169 ORTHO05D007243 7.2e-51 204.9 224 50.9
MD14G1157400 Malus domestica HOM05D007169 ORTHO05D007243 3.6e-50 202.6 274 43.4
Gohir.D08G258666 Gossypium hirsutum HOM05D007169 ORTHO05D007243 4.6e-50 202.2 155 63.9
CANSAT80G1416 Cannabis sativa HOM05D007169 ORTHO05D007243 1.1e-48 197.6 232 49.1
GSVIVG01008542001 Vitis vinifera HOM05D003858 ORTHO05D005878 2.5e-48 196.4 232 47.4
Cfa018798 Carpinus fangiana HOM05D007169 ORTHO05D007243 2.2e-47 193.4 207 51.2
Sc04g0000670 Simmondsia chinensis HOM05D007169 ORTHO05D007243 2.2e-47 193.4 225 47.6
Gorai.008G206100 Gossypium raimondii HOM05D007169 ORTHO05D007243 2.8e-47 193.0 208 51.0
Gohir.D12G191801 Gossypium hirsutum HOM05D007169 ORTHO05D007243 1.1e-46 191.0 208 50.5
Haze_07134 Corylus avellana HOM05D007169 ORTHO05D007243 1.8e-46 190.3 207 50.2
Nn3g16473 Nelumbo nucifera HOM05D007169 ORTHO05D007243 2.4e-46 189.9 250 44.4
VMungo1309G2045 Vigna mungo HOM05D007169 ORTHO05D007243 4.1e-46 189.1 172 57.6
Lsat_1_v5_gn_1_28980 Lactuca sativa HOM05D007169 ORTHO05D007243 7.7e-45 184.9 227 42.7
Hma1.2p1_0014F.1_g009470 Hydrangea macrophylla HOM05D007169 ORTHO05D007243 3.8e-44 182.6 231 45.9
Rhsim08G0190100 Rhododendron simsii HOM05D007169 ORTHO05D007243 3.2e-43 179.5 220 46.8
Medtr2g045120 Medicago truncatula HOM05D007169 ORTHO05D007243 1.6e-42 177.2 174 54.0
Medtr2g445400 Medicago truncatula HOM05D007169 ORTHO05D007243 1.6e-42 177.2 174 54.0
HanXRQChr02g0034741 Helianthus annuus HOM05D007169 ORTHO05D007243 6.1e-42 175.3 223 40.8
CANSAT80G0844 Cannabis sativa HOM05D007169 ORTHO05D007243 7.9e-42 174.9 153 58.2
Lalb_Chr23g0273701 Lupinus albus HOM05D007169 ORTHO05D007243 5.1e-41 172.2 216 45.8
ECA247G3219 Erigeron canadensis HOM05D007169 ORTHO05D007243 2.6e-40 169.9 247 38.5
COL.COLO4_28120 Corchorus olitorius HOM05D007169 ORTHO05D007243 4.4e-40 169.1 244 43.0
Dinv23144 Davidia involucrata HOM05D007169 ORTHO05D007243 2.2e-39 166.8 179 50.3
SalBow5G3517 Salvia bowleyana HOM05D007169 ORTHO05D007243 3.7e-39 166.0 151 54.3
CSS0048648 Camellia sinensis var. sinensis HOM05D007169 ORTHO05D007243 4.8e-39 165.6 153 58.2
Oeu006492.1 Olea europaea HOM05D007169 ORTHO05D007243 4.8e-39 165.6 138 57.2
TAR374G1569 Trochodendron aralioides HOM05D007169 ORTHO05D007243 4.8e-39 165.6 266 39.1
TAR371G0734 Trochodendron aralioides HOM05D007169 ORTHO05D007243 1.1e-38 164.5 237 41.8
SalBow5G4624 Salvia bowleyana HOM05D007169 ORTHO05D007243 1.4e-38 164.1 151 53.6
Actinidia18344 Actinidia chinensis HOM05D007169 ORTHO05D007243 2.4e-38 163.3 147 57.1
MSTRG.11390 Avicennia marina HOM05D007169 ORTHO05D007243 6.9e-38 161.8 157 51.0
TAR622G0369 Trochodendron aralioides HOM05D007169 ORTHO05D007243 1.2e-37 161.0 172 48.8
vmacro07808 Vaccinium macrocarpon HOM05D007169 ORTHO05D007243 1.5e-37 160.6 224 41.5
EL10Ac5g11418 Beta vulgaris HOM05D007169 ORTHO05D007243 4.5e-37 159.1 142 56.3
AUR62029615 Chenopodium quinoa HOM05D007169 ORTHO05D007243 5.9e-37 158.7 155 55.5
DCAR_016391 Daucus carota HOM05D007169 ORTHO05D007243 7.7e-37 158.3 177 49.2
Lj5A96T48 Lonicera japonica HOM05D007169 ORTHO05D007243 1.3e-36 157.5 150 52.0
Ah.02g111120 Amaranthus hybridus HOM05D007169 ORTHO05D007243 1.7e-36 157.1 137 59.9
Peaxi162Scf00089g01624 Petunia axillaris HOM05D007169 ORTHO05D007243 5.0e-36 155.6 142 58.5
Migut.I00155 Erythranthe guttata HOM05D007169 ORTHO05D007243 2.5e-35 153.3 167 47.3
SGA_v2.0_scaffold56G20032 Striga asiatica HOM05D007169 ORTHO05D007243 3.2e-35 152.9 140 55.7
Solyc03g112570.2 Solanum lycopersicum HOM05D007169 ORTHO05D007243 5.5e-35 152.1 142 56.3
Sopen03g031630 Solanum pennellii HOM05D007169 ORTHO05D007243 1.2e-34 151.0 142 56.3
DCAR_021617 Daucus carota HOM05D007169 ORTHO05D007243 2.1e-34 150.2 209 42.6
Aqoxy3G00802 Aquilegia oxysepala HOM05D007169 ORTHO05D007243 2.7e-34 149.8 203 42.9
PGSC0003DMG400018172 Solanum tuberosum HOM05D007169 ORTHO05D007243 6.1e-34 148.7 142 54.2
PSO478G3704 Papaver somniferum HOM05D007169 ORTHO05D007243 7.9e-34 148.3 153 51.0
FAN08G0105 Fragaria x ananassa HOM05D007169 ORTHO05D007243 1.0e-33 147.9 129 59.7
CAN.G338.2 Capsicum annuum HOM05D007169 ORTHO05D007243 1.1e-32 144.4 142 52.1
Cc06_g22780 Coffea canephora HOM05D007169 ORTHO05D007243 1.1e-32 144.4 139 53.2
PSO017G4677 Papaver somniferum HOM05D007169 ORTHO05D007243 1.1e-32 144.4 153 49.7
Nitab4.5_0011992g0030 Nicotiana tabacum HOM05D007169 ORTHO05D007243 8.2e-31 138.3 151 49.0
HPP92_011766 Vanilla planifolia HOM05D007169 ORTHO05D007243 8.2e-31 138.3 215 40.9
unitig_0.g2530 Utricularia gibba HOM05D007169 ORTHO05D007243 2.4e-30 136.7 146 48.6
HPP92_011770 Vanilla planifolia HOM05D007169 ORTHO05D007243 2.0e-29 133.7 161 44.7
ATR0561G062 Amborella trichopoda HOM05D011398 ORTHO05D007243 3.2e-27 126.3 236 33.9
Hund26053 Selenicereus undatus HOM05D007169 ORTHO05D007243 1.4e-25 120.9 90 62.2
Os08g0531200 Oryza sativa ssp. japonica HOM05D011398 ORTHO05D007243 1.7e-23 114.0 231 33.3
SEGI_24222 Sequoiadendron giganteum HOM05D007169 ORTHO05D007243 9.1e-22 108.2 78 60.3
Zm00001eb175120 Zea mays HOM05D011398 ORTHO05D007243 3.5e-21 106.3 156 37.2
Sabra12G0071300 Salix brachista HOM05D000677 ORTHO05D000727 2.3e-17 93.6 77 63.6
arahy.Tifrunner.gnm1.ann1.M1N3UH Arachis hypogaea HOM05D002218 ORTHO05D007243 4.8e-15 85.9 62 64.5
CBR_g46730 Chara braunii HOM05D011398 ORTHO05D007243 5.0e-12 75.9 77 46.8
Mapoly0022s0039 Marchantia polymorpha HOM05D011398 ORTHO05D007243 6.1e-10 68.9 143 29.4
CBR_g30247 Chara braunii HOM05D011398 ORTHO05D007243 2.3e-09 67.0 91 37.4
Pp3c9_18230 Physcomitrium patens HOM05D011398 ORTHO05D007243 1.1e-06 58.2 67 35.8
AagrBONN_evm.TU.Sc2ySwM_344.3697 Anthoceros agrestis HOM05D011398 ORTHO05D007243 5.4e-06 55.8 64 39.1


User provided reference genes

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