Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C02p20240 Brassica napus HOM05D006795 ORTHO05D008573 3.5e-137 491.5 228 100.0
BolC2t08156H Brassica oleracea HOM05D006795 ORTHO05D008573 1.7e-136 489.2 228 99.1
BcaC03g14579 Brassica carinata HOM05D006795 ORTHO05D008573 7.3e-135 483.8 229 98.7
A02p12140 Brassica napus HOM05D006795 ORTHO05D008573 8.0e-134 480.3 228 97.4
BraA02t06278Z Brassica rapa HOM05D006795 ORTHO05D008573 8.3e-131 470.3 234 94.4
Thhalv10014608m.g Eutrema salsugineum HOM05D006795 ORTHO05D008573 2.5e-119 432.2 222 91.0
BcaB08g35519 Brassica carinata HOM05D006795 ORTHO05D008573 3.3e-119 431.8 229 89.1
A10p09570 Brassica napus HOM05D006795 ORTHO05D008573 9.9e-116 420.2 232 87.5
BraA10t43032Z Brassica rapa HOM05D006795 ORTHO05D008573 9.9e-116 420.2 232 87.5
Aa31LG3G8130 Aethionema arabicum HOM05D006795 ORTHO05D008573 1.6e-105 386.3 223 78.5
BcaB05g23990 Brassica carinata HOM05D006795 ORTHO05D008573 9.6e-103 377.1 195 93.8
MD07G1259600 Malus domestica HOM05D006795 ORTHO05D008573 1.5e-95 353.2 222 69.4
THA.LOC104825075 Tarenaya hassleriana HOM05D006795 ORTHO05D008573 4.3e-95 351.7 221 71.9
CARHR264540 Cardamine hirsuta HOM05D006795 ORTHO05D008573 7.4e-95 350.9 190 84.7
AL8G25950 Arabidopsis lyrata HOM05D006795 ORTHO05D008573 1.6e-94 349.7 187 88.2
FAN06G0634 Fragaria x ananassa HOM05D001585 ORTHO05D001677 2.1e-94 349.4 222 69.4
FAN06G3003 Fragaria x ananassa HOM05D001585 ORTHO05D001677 2.1e-94 349.4 222 69.4
Cpa.g.sc3.258 Carica papaya HOM05D006795 ORTHO05D008573 3.1e-93 345.5 224 71.0
FvH4_7g28300 Fragaria vesca HOM05D006795 ORTHO05D008573 3.1e-93 345.5 223 69.5
Sp6g13920 Schrenkiella parvula HOM05D006795 ORTHO05D008573 4.0e-93 345.1 187 85.0
COL.COLO4_14197 Corchorus olitorius HOM05D006795 ORTHO05D008573 5.3e-93 344.7 216 73.6
Carub.0008s1172 Capsella rubella HOM05D006795 ORTHO05D008573 2.6e-92 342.4 187 86.1
CAN.G1187.5 Capsicum annuum HOM05D006795 ORTHO05D008573 3.4e-92 342.0 217 70.0
Haze_13816 Corylus avellana HOM05D006795 ORTHO05D008573 1.0e-91 340.5 221 67.4
Sabra15G0145100 Salix brachista HOM05D006795 ORTHO05D008573 1.0e-91 340.5 229 67.2
FAN10G2418 Fragaria x ananassa HOM05D006795 ORTHO05D008573 1.7e-91 339.7 220 69.5
MD01G1187300 Malus domestica HOM05D006795 ORTHO05D008573 1.7e-91 339.7 221 67.4
AT5G51700 Arabidopsis thaliana HOM05D006795 ORTHO05D008573 2.2e-91 339.3 187 86.1
QL12p039358 Quercus lobata HOM05D006795 ORTHO05D008573 3.8e-91 338.6 229 67.7
Dinv07998 Davidia involucrata HOM05D006795 ORTHO05D008573 4.9e-91 338.2 222 68.9
Potri.015G132300 Populus trichocarpa HOM05D006795 ORTHO05D008573 1.1e-90 337.0 228 67.1
arahy.Tifrunner.gnm1.ann1.ATT3CU Arachis hypogaea HOM05D006795 ORTHO05D008573 1.4e-90 336.7 215 69.8
Prupe.2G283700 Prunus persica HOM05D006795 ORTHO05D008573 1.4e-90 336.7 222 68.0
PGR042G2278 Punica granatum HOM05D006795 ORTHO05D008573 1.4e-90 336.7 217 69.1
Sc13g0008130 Simmondsia chinensis HOM05D006795 ORTHO05D008573 1.4e-90 336.7 215 71.2
arahy.Tifrunner.gnm1.ann1.939HGU Arachis hypogaea HOM05D006795 ORTHO05D008573 1.9e-90 336.3 215 69.8
ECA238G4708 Erigeron canadensis HOM05D006795 ORTHO05D008573 1.9e-90 336.3 220 68.6
Lj8A35T83 Lonicera japonica HOM05D006795 ORTHO05D008573 1.6e-89 333.2 213 70.9
CANSAT21G1655 Cannabis sativa HOM05D006795 ORTHO05D008573 2.1e-89 332.8 225 67.6
RcHm_v2.0_Chr1g0375271 Rosa chinensis HOM05D006795 ORTHO05D008573 4.6e-89 331.6 224 67.9
TWI39G0269 Tripterygium wilfordii HOM05D006795 ORTHO05D008573 6.0e-89 331.3 223 69.1
Manes.06G149000 Manihot esculenta HOM05D006795 ORTHO05D008573 7.9e-89 330.9 222 66.7
Duzib068G1417 Durio zibethinus HOM05D006795 ORTHO05D008573 1.0e-88 330.5 217 68.2
CSS0024840 Camellia sinensis var. sinensis HOM05D006795 ORTHO05D008573 1.3e-88 330.1 220 69.5
Ciclev10005807m.g Citrus clementina HOM05D006795 ORTHO05D008573 3.0e-88 328.9 219 68.9
Nn1g01176 Nelumbo nucifera HOM05D006795 ORTHO05D008573 3.0e-88 328.9 216 68.1
Nitab4.5_0000205g0150 Nicotiana tabacum HOM05D006795 ORTHO05D008573 3.0e-88 328.9 219 65.8
Lj5g0021204 Lotus japonicus HOM05D006795 ORTHO05D008573 3.9e-88 328.6 217 69.1
Medtr1g102470 Medicago truncatula HOM05D006795 ORTHO05D008573 3.9e-88 328.6 219 67.6
Nitab4.5_0001589g0020 Nicotiana tabacum HOM05D006795 ORTHO05D008573 8.7e-88 327.4 219 65.8
Peaxi162Scf00132g00138 Petunia axillaris HOM05D006795 ORTHO05D008573 1.5e-87 326.6 231 64.9
Gohir.D09G174200 Gossypium hirsutum HOM05D006795 ORTHO05D008573 1.9e-87 326.2 219 68.5
Lsat_1_v5_gn_2_129741 Lactuca sativa HOM05D006795 ORTHO05D008573 3.3e-87 325.5 227 67.4
Hund04657 Selenicereus undatus HOM05D006795 ORTHO05D008573 4.3e-87 325.1 218 67.0
Actinidia31794 Actinidia chinensis HOM05D006795 ORTHO05D008573 5.7e-87 324.7 221 67.0
Gohir.A09G178600 Gossypium hirsutum HOM05D006795 ORTHO05D008573 5.7e-87 324.7 219 68.0
Solyc11g072290.3 Solanum lycopersicum HOM05D006795 ORTHO05D008573 5.7e-87 324.7 222 66.2
Migut.F00416 Erythranthe guttata HOM05D006795 ORTHO05D008573 7.4e-87 324.3 219 66.7
Thecc.03G163300 Theobroma cacao HOM05D006795 ORTHO05D008573 7.4e-87 324.3 218 68.3
CiPaw.03G097900 Carya illinoinensis HOM05D006795 ORTHO05D008573 1.3e-86 323.6 217 66.8
Cc02_g03780 Coffea canephora HOM05D006795 ORTHO05D008573 2.8e-86 322.4 218 67.0
Aqoxy7G00570 Aquilegia oxysepala HOM05D006795 ORTHO05D008573 3.7e-86 322.0 221 66.5
Glyma.10G242200 Glycine max HOM05D006795 ORTHO05D008573 3.7e-86 322.0 219 65.3
vmacro06760 Vaccinium macrocarpon HOM05D006795 ORTHO05D008573 8.2e-86 320.9 215 67.9
PSO478G2429 Papaver somniferum HOM05D006795 ORTHO05D008573 5.3e-85 318.2 220 65.9
PSO782G4689 Papaver somniferum HOM05D006795 ORTHO05D008573 1.5e-84 316.6 220 65.5
EL10Ac3g05773 Beta vulgaris HOM05D006795 ORTHO05D008573 3.4e-84 315.5 218 64.7
unitig_0.g1164 Utricularia gibba HOM05D006795 ORTHO05D008573 3.4e-84 315.5 214 65.9
TPR.G26107 Trifolium pratense HOM05D006795 ORTHO05D008573 5.8e-84 314.7 218 64.7
AUR62016086 Chenopodium quinoa HOM05D006795 ORTHO05D008573 2.2e-83 312.8 220 66.4
Glyma.20G151900 Glycine max HOM05D006795 ORTHO05D008573 2.2e-83 312.8 220 64.1
ClCG11G008970 Citrullus lanatus HOM05D006795 ORTHO05D008573 2.9e-83 312.4 221 64.3
Atru.chr1.614 Acer truncatum HOM05D006795 ORTHO05D008573 3.8e-83 312.0 220 65.5
FAN01G1007 Fragaria x ananassa HOM05D006795 ORTHO05D008573 3.2e-82 308.9 235 63.0
TAR636G0045 Trochodendron aralioides HOM05D006795 ORTHO05D008573 4.2e-82 308.5 260 56.9
HPP92_005470 Vanilla planifolia HOM05D006795 ORTHO05D008573 9.3e-82 307.4 222 65.3
Eucgr.A02872 Eucalyptus grandis HOM05D006795 ORTHO05D008573 2.7e-81 305.8 223 63.2
CsaV3_2G010830 Cucumis sativus L. HOM05D006795 ORTHO05D008573 7.9e-81 304.3 217 63.1
FAN03G1859 Fragaria x ananassa HOM05D001585 ORTHO05D001677 2.3e-80 302.8 192 70.8
ATR1145G092 Amborella trichopoda HOM05D006795 ORTHO05D008573 1.9e-79 299.7 227 59.0
SEGI_28069 Sequoiadendron giganteum HOM05D006795 ORTHO05D008573 4.3e-79 298.5 219 61.2
Lalb_Chr02g0140771 Lupinus albus HOM05D006795 ORTHO05D008573 5.7e-79 298.1 221 61.5
AUR62035033 Chenopodium quinoa HOM05D006795 ORTHO05D008573 1.6e-78 296.6 234 62.0
FAN03G1183 Fragaria x ananassa HOM05D001585 ORTHO05D001677 2.2e-78 296.2 188 70.2
GSVIVG01018489001 Vitis vinifera HOM05D006795 ORTHO05D008573 2.8e-78 295.8 191 71.7
Mapoly0020s0061 Marchantia polymorpha HOM05D006795 ORTHO05D008573 9.0e-77 290.8 219 59.8
Rhsim03G0172800 Rhododendron simsii HOM05D006795 ORTHO05D008573 4.5e-76 288.5 194 68.6
Manes.06G139000 Manihot esculenta HOM05D006795 ORTHO05D008573 5.9e-76 288.1 190 69.5
Sed0014900 Sechium edule HOM05D006795 ORTHO05D008573 3.2e-74 282.3 265 54.0
SGA_v2.0_scaffold2G01112 Striga asiatica HOM05D006795 ORTHO05D008573 1.2e-73 280.4 192 68.2
MSTRG.119 Avicennia marina HOM05D006795 ORTHO05D008573 8.8e-72 274.2 189 65.1
Oeu021736.1 Olea europaea HOM05D006795 ORTHO05D008573 2.0e-71 273.1 183 69.4
Gorai.006G196200 Gossypium raimondii HOM05D006795 ORTHO05D008573 3.3e-71 272.3 201 64.2
Actinidia03085 Actinidia chinensis HOM05D006795 ORTHO05D008573 9.7e-71 270.8 183 67.8
Sopen11g029960 Solanum pennellii HOM05D006795 ORTHO05D008573 1.7e-70 270.0 186 66.1
Os02g0535400 Oryza sativa ssp. japonica HOM05D006795 ORTHO05D008573 2.4e-69 266.2 189 66.1
Ah.13g067570 Amaranthus hybridus HOM05D006795 ORTHO05D008573 4.5e-68 261.9 183 66.7
SMO146G0237 Selaginella moellendorffii HOM05D006795 ORTHO05D008573 4.5e-68 261.9 214 56.1
CDE06G1038 Ceratophyllum demersum HOM05D006795 ORTHO05D008573 1.0e-67 260.8 196 61.2
Psat6g202120 Pisum sativum HOM05D006795 ORTHO05D008573 1.7e-67 260.0 182 65.4
Psat6g202920 Pisum sativum HOM05D006795 ORTHO05D008573 1.7e-67 260.0 182 65.4
Oeu042417.2 Olea europaea HOM05D006795 ORTHO05D008573 5.0e-67 258.5 215 61.4
Zm00001eb242890 Zea mays HOM05D006795 ORTHO05D008573 3.2e-66 255.8 185 62.7
SalBow4G0392 Salvia bowleyana HOM05D006795 ORTHO05D008573 9.4e-66 254.2 218 56.4
SalBow4G1076 Salvia bowleyana HOM05D006795 ORTHO05D008573 9.4e-66 254.2 218 56.4
Ca_10834_v3 Cicer arietinum L. HOM05D006795 ORTHO05D008573 1.2e-65 253.8 219 57.1
Pp3c14_10540 Physcomitrium patens HOM05D006795 ORTHO05D008573 1.3e-62 243.8 195 59.5
TAR629G1442 Trochodendron aralioides HOM05D006795 ORTHO05D008573 5.3e-61 238.4 200 55.5
CSS0028605 Camellia sinensis var. sinensis HOM05D006795 ORTHO05D008573 7.0e-61 238.0 219 55.7
CBR_g32001 Chara braunii HOM05D006795 ORTHO05D008573 2.2e-59 233.0 193 55.4
VMungo0720G2517 Vigna mungo HOM05D006795 ORTHO05D008573 1.5e-50 203.8 152 61.8
MCO02G265 Micromonas commoda HOM05D006795 ORTHO05D008573 1.2e-49 200.7 212 44.3
Phvul.007G063300 Phaseolus vulgaris HOM05D006795 ORTHO05D008573 3.6e-49 199.1 133 64.7
PGSC0003DMG400027380 Solanum tuberosum HOM05D006795 ORTHO05D008573 2.8e-46 189.5 127 65.4
Zm00001eb181460 Zea mays HOM05D006795 ORTHO05D008573 5.0e-35 152.1 89 69.7
MELO3C008527.2 Cucumis melo HOM05D006795 ORTHO05D008573 1.2e-33 147.5 77 75.3
SMO146G0045 Selaginella moellendorffii HOM05D006795 ORTHO05D008573 7.8e-20 101.7 188 37.2
AL8G25960 Arabidopsis lyrata HOM05D006795 ORTHO05D008573 2.8e-09 66.6 36 86.1
CARHR264550 Cardamine hirsuta HOM05D006795 ORTHO05D008573 1.8e-08 63.9 29 89.7
PRCOL_00002330 Prasinoderma coloniale HOM05D006795 ORTHO05D008573 2.6e-07 60.1 61 37.7


User provided reference genes

Program Settings