Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C02p20160 Brassica napus HOM05D001031 ORTHO05D027100 3.8e-42 174.5 92 100.0
BolC2t08145H Brassica oleracea HOM05D001031 ORTHO05D027100 1.1e-41 172.9 92 98.9
BcaC03g14568 Brassica carinata HOM05D001031 ORTHO05D027100 5.5e-25 117.5 63 96.8
BraA02t06272Z Brassica rapa HOM05D001031 ORTHO05D027100 7.0e-20 100.5 68 82.4
Sp3g07050 Schrenkiella parvula HOM05D001031 ORTHO05D000857 8.5e-18 93.6 83 65.1
AT3G08600 Arabidopsis thaliana HOM05D001031 ORTHO05D000857 7.2e-17 90.5 73 71.2
A05p40180 Brassica napus HOM05D001031 ORTHO05D000857 1.2e-16 89.7 76 68.4
BolC5t34571H Brassica oleracea HOM05D001031 ORTHO05D000857 1.2e-16 89.7 76 68.4
AL3G19580 Arabidopsis lyrata HOM05D001031 ORTHO05D000857 3.6e-16 88.2 71 70.4
CARHR082900 Cardamine hirsuta HOM05D001031 ORTHO05D000857 6.1e-16 87.4 71 69.0
Carub.0003s0773 Capsella rubella HOM05D001031 ORTHO05D000857 1.0e-15 86.7 73 67.1
Thhalv10022271m.g Eutrema salsugineum HOM05D001031 ORTHO05D000857 1.4e-15 86.3 71 69.0
Aa31LG5G18670 Aethionema arabicum HOM05D001031 ORTHO05D000857 1.8e-15 85.9 79 60.8
BcaC01g04186 Brassica carinata HOM05D001031 ORTHO05D000857 2.3e-15 85.5 82 58.5
C05p59260 Brassica napus HOM05D001031 ORTHO05D000857 2.3e-15 85.5 71 69.0
C03p44070 Brassica napus HOM05D001031 ORTHO05D000857 5.2e-15 84.3 82 58.5
BolC3t16677H Brassica oleracea HOM05D001031 ORTHO05D000857 5.2e-15 84.3 82 58.5
BcaB04g18585 Brassica carinata HOM05D001031 ORTHO05D000857 8.8e-15 83.6 72 66.7
A03p36450 Brassica napus HOM05D001031 ORTHO05D000857 3.4e-14 81.6 81 56.8
BraA03t12813Z Brassica rapa HOM05D001031 ORTHO05D000857 3.4e-14 81.6 81 56.8
QL07p031337 Quercus lobata HOM05D001031 ORTHO05D000857 1.2e-11 73.2 77 53.2
Cfa016999 Carpinus fangiana HOM05D001031 ORTHO05D000857 2.0e-11 72.4 74 55.4
FAN02G4181 Fragaria x ananassa HOM05D001031 ORTHO05D000857 2.7e-11 72.0 74 52.7
Atru.chr8.62 Acer truncatum HOM05D001031 ORTHO05D000857 4.5e-11 71.2 79 48.1
FvH4_6g09410 Fragaria vesca HOM05D001031 ORTHO05D000857 4.5e-11 71.2 82 48.8
FAN14G3272 Fragaria x ananassa HOM05D001031 ORTHO05D000857 4.5e-11 71.2 82 48.8
TWI77G0634 Tripterygium wilfordii HOM05D001031 ORTHO05D000857 5.9e-11 70.9 77 51.9
Haze_21229 Corylus avellana HOM05D001031 ORTHO05D000857 1.0e-10 70.1 74 52.7
CiPaw.10G166800 Carya illinoinensis HOM05D001031 ORTHO05D000857 1.3e-10 69.7 84 51.2
Ciclev10012288m.g Citrus clementina HOM05D001031 ORTHO05D000857 1.3e-10 69.7 74 52.7
Glyma.16G221400 Glycine max HOM05D001031 ORTHO05D000857 1.3e-10 69.7 77 49.4
Manes.09G121500 Manihot esculenta HOM05D001031 ORTHO05D000857 1.7e-10 69.3 74 52.7
Lalb_Chr07g0195801 Lupinus albus HOM05D001031 ORTHO05D000857 2.3e-10 68.9 79 50.6
Phvul.010G059500 Phaseolus vulgaris HOM05D001031 ORTHO05D000857 2.3e-10 68.9 77 48.1
Manes.08G167900 Manihot esculenta HOM05D001031 ORTHO05D000857 2.9e-10 68.6 66 56.1
PGR004G2073 Punica granatum HOM05D001031 ORTHO05D000857 3.8e-10 68.2 66 54.5
RcHm_v2.0_Chr3g0459851 Rosa chinensis HOM05D001031 ORTHO05D000857 3.8e-10 68.2 73 52.1
VMungo0331G1312 Vigna mungo HOM05D001031 ORTHO05D000857 3.8e-10 68.2 75 48.0
Duzib151G0836 Durio zibethinus HOM05D001031 ORTHO05D000857 5.0e-10 67.8 77 49.4
Lalb_Chr12g0210701 Lupinus albus HOM05D001031 ORTHO05D000857 5.0e-10 67.8 79 48.1
Potri.006G111700 Populus trichocarpa HOM05D001031 ORTHO05D000857 5.0e-10 67.8 79 49.4
FAN09G0294 Fragaria x ananassa HOM05D001031 ORTHO05D000857 6.6e-10 67.4 69 52.2
CSS0032313 Camellia sinensis var. sinensis HOM05D001031 ORTHO05D000857 8.6e-10 67.0 74 50.0
CSS0037610 Camellia sinensis var. sinensis HOM05D001031 ORTHO05D000857 8.6e-10 67.0 74 50.0
Phvul.008G079000 Phaseolus vulgaris HOM05D001031 ORTHO05D000857 8.6e-10 67.0 77 48.1
Prupe.6G297900 Prunus persica HOM05D001031 ORTHO05D000857 8.6e-10 67.0 73 47.9
ECA236G0626 Erigeron canadensis HOM05D001031 ORTHO05D000857 1.1e-09 66.6 66 50.0
Nn4g23021 Nelumbo nucifera HOM05D001031 ORTHO05D000857 1.1e-09 66.6 71 53.5
Glyma.03G001000 Glycine max HOM05D001031 ORTHO05D000857 1.5e-09 66.2 82 47.6
Medtr7g074120 Medicago truncatula HOM05D001031 ORTHO05D000857 1.5e-09 66.2 78 51.3
Thecc.02G366500 Theobroma cacao HOM05D001031 ORTHO05D000857 1.5e-09 66.2 75 49.3
VMungo1383G0927 Vigna mungo HOM05D001031 ORTHO05D000857 1.5e-09 66.2 77 48.1
Oeu041728.1 Olea europaea HOM05D001031 ORTHO05D000857 1.9e-09 65.9 74 51.4
TWI53G0866 Tripterygium wilfordii HOM05D001031 ORTHO05D000857 1.9e-09 65.9 66 51.5
Potri.016G141100 Populus trichocarpa HOM05D001031 ORTHO05D000857 2.5e-09 65.5 77 46.8
Nitab4.5_0001203g0010 Nicotiana tabacum HOM05D001031 ORTHO05D000857 3.3e-09 65.1 77 46.8
Glyma.18G217800 Glycine max HOM05D001031 ORTHO05D000857 4.3e-09 64.7 66 51.5
Cpa.g.sc0.68 Carica papaya HOM05D001031 ORTHO05D000857 5.6e-09 64.3 74 45.9
Glyma.09G271500 Glycine max HOM05D001031 ORTHO05D000857 5.6e-09 64.3 66 51.5
Nitab4.5_0004009g0010 Nicotiana tabacum HOM05D001031 ORTHO05D000857 5.6e-09 64.3 77 46.8
Sabra04G0157500 Salix brachista HOM05D001031 ORTHO05D000857 5.6e-09 64.3 79 48.1
CANSAT54G1007 Cannabis sativa HOM05D001031 ORTHO05D000857 7.3e-09 63.9 81 46.9
Lj1g0004998 Lotus japonicus HOM05D001031 ORTHO05D000857 7.3e-09 63.9 83 49.4
Peaxi162Scf00732g10014 Petunia axillaris HOM05D001031 ORTHO05D000857 7.3e-09 63.9 77 46.8
MD12G1193600 Malus domestica HOM05D001031 ORTHO05D000857 9.5e-09 63.5 78 46.2
CsaV3_4G027400 Cucumis sativus L. HOM05D001031 ORTHO05D000857 1.2e-08 63.2 66 53.0
DCAR_023960 Daucus carota HOM05D001031 ORTHO05D000857 1.2e-08 63.2 71 49.3
Eucgr.K01300 Eucalyptus grandis HOM05D001031 ORTHO05D000857 1.2e-08 63.2 79 41.8
Aqoxy4G03310 Aquilegia oxysepala HOM05D001031 ORTHO05D000857 1.6e-08 62.8 66 51.5
Lsat_1_v5_gn_5_151380 Lactuca sativa HOM05D001031 ORTHO05D000857 1.6e-08 62.8 81 45.7
TPR.G24340 Trifolium pratense HOM05D001031 ORTHO05D000857 1.6e-08 62.8 78 44.9
Cc06_g00190 Coffea canephora HOM05D001031 ORTHO05D000857 2.1e-08 62.4 66 51.5
Gohir.A10G152100 Gossypium hirsutum HOM05D001031 ORTHO05D000857 2.1e-08 62.4 79 44.3
Gohir.D10G114200 Gossypium hirsutum HOM05D001031 ORTHO05D000857 2.1e-08 62.4 79 44.3
Gorai.011G125900 Gossypium raimondii HOM05D001031 ORTHO05D000857 2.1e-08 62.4 79 44.3
Hma1.2p1_0174F.1_g076620 Hydrangea macrophylla HOM05D001031 ORTHO05D000857 2.1e-08 62.4 77 44.2
PSO339G2038 Papaver somniferum HOM05D001031 ORTHO05D000857 2.1e-08 62.4 74 48.6
PSO384G2441 Papaver somniferum HOM05D001031 ORTHO05D000857 2.1e-08 62.4 74 48.6
Lj2C56T8 Lonicera japonica HOM05D001031 ORTHO05D000857 3.6e-08 61.6 66 51.5
Rhsim05G0233600 Rhododendron simsii HOM05D001031 ORTHO05D000857 4.7e-08 61.2 74 45.9
MD04G1178000 Malus domestica HOM05D001031 ORTHO05D000857 6.1e-08 60.8 73 45.2
Oeu026928.2 Olea europaea HOM05D001031 ORTHO05D000857 8.0e-08 60.5 76 46.1
Sabra06G0086900 Salix brachista HOM05D001031 ORTHO05D000857 8.0e-08 60.5 77 44.2
Actinidia29009 Actinidia chinensis HOM05D001031 ORTHO05D000857 1.4e-07 59.7 74 43.2
PGSC0003DMG400027699 Solanum tuberosum HOM05D001031 ORTHO05D000857 1.8e-07 59.3 80 43.8
THA.LOC104816648 Tarenaya hassleriana HOM05D001031 ORTHO05D000857 2.3e-07 58.9 79 44.3
Lalb_Chr01g0023961 Lupinus albus HOM05D001031 ORTHO05D000857 3.0e-07 58.5 84 38.1
ECA248G0606 Erigeron canadensis HOM05D001031 ORTHO05D000857 4.0e-07 58.2 65 50.8
Lalb_Chr24g0400431 Lupinus albus HOM05D001031 ORTHO05D000857 4.0e-07 58.2 84 38.1
Psat3g117640 Pisum sativum HOM05D001031 ORTHO05D000857 4.0e-07 58.2 75 49.3
Lj3g0019388 Lotus japonicus HOM05D001031 ORTHO05D000857 5.2e-07 57.8 66 45.5
CAN.G659.22 Capsicum annuum HOM05D001031 ORTHO05D000857 6.8e-07 57.4 77 42.9
Peaxi162Scf00374g00043 Petunia axillaris HOM05D001031 ORTHO05D000857 6.8e-07 57.4 77 45.5
Solyc10g074820.1 Solanum lycopersicum HOM05D001031 ORTHO05D000857 6.8e-07 57.4 74 44.6
Sopen10g027310 Solanum pennellii HOM05D001031 ORTHO05D000857 6.8e-07 57.4 74 44.6
Lsat_1_v5_gn_8_109721 Lactuca sativa HOM05D001031 ORTHO05D000857 8.9e-07 57.0 66 45.5
Nitab4.5_0001629g0030 Nicotiana tabacum HOM05D001031 ORTHO05D000857 8.9e-07 57.0 77 44.2
Migut.J00011 Erythranthe guttata HOM05D001031 ORTHO05D000857 2.0e-06 55.8 74 44.6
Nitab4.5_0003037g0120 Nicotiana tabacum HOM05D001031 ORTHO05D000857 2.0e-06 55.8 77 42.9
TAR633G2690 Trochodendron aralioides HOM05D001031 ORTHO05D000857 2.0e-06 55.8 74 44.6
HanXRQChr06g0172061 Helianthus annuus HOM05D001475 ORTHO05D001525 2.6e-06 55.5 64 43.8
TPR.G30731 Trifolium pratense HOM05D001031 ORTHO05D000857 2.6e-06 55.5 67 52.2
Thecc.04G147500 Theobroma cacao HOM05D001031 ORTHO05D000857 7.5e-06 53.9 77 44.2


User provided reference genes

Program Settings