Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C02p20010 Brassica napus HOM05D008820 ORTHO05D011139 7.3e-86 320.5 156 100.0
C01p12760 Brassica napus HOM05D008820 ORTHO05D011139 1.5e-83 312.8 156 97.4
BolC3t20944H Brassica oleracea HOM05D008820 ORTHO05D011139 3.6e-77 291.6 144 96.5
BolC3t16052H Brassica oleracea HOM05D008820 ORTHO05D011139 3.1e-76 288.5 144 95.8
BcaC04g22692 Brassica carinata HOM05D008820 ORTHO05D011139 2.6e-51 205.7 145 69.0
C09p16490 Brassica napus HOM05D008820 ORTHO05D011139 2.6e-51 205.7 145 69.0
BolC9t54559H Brassica oleracea HOM05D008820 ORTHO05D011139 2.6e-51 205.7 145 69.0
A09p15380 Brassica napus HOM05D008820 ORTHO05D011139 5.8e-51 204.5 142 73.2
BraA09t37180Z Brassica rapa HOM05D008820 ORTHO05D011139 5.8e-51 204.5 142 73.2
C09p18650 Brassica napus HOM05D008820 ORTHO05D011139 1.7e-50 203.0 141 73.8
BcaNung06083 Brassica carinata HOM05D008820 ORTHO05D011139 4.9e-50 201.4 141 73.8
BolC9t54760H Brassica oleracea HOM05D008820 ORTHO05D011139 4.9e-50 201.4 141 73.8
A09p13800 Brassica napus HOM05D008820 ORTHO05D011139 1.1e-49 200.3 145 66.9
BcaB07g31557 Brassica carinata HOM05D008820 ORTHO05D011139 1.4e-49 199.9 146 67.8
BraA09t37032Z Brassica rapa HOM05D008820 ORTHO05D011139 7.1e-49 197.6 145 66.9
Sp2g00990 Schrenkiella parvula HOM05D008820 ORTHO05D011139 1.2e-48 196.8 146 69.2
CARHR047670 Cardamine hirsuta HOM05D008820 ORTHO05D011139 1.8e-47 193.0 147 65.3
Thhalv10023318m.g Eutrema salsugineum HOM05D008820 ORTHO05D011139 2.3e-47 192.6 147 65.3
AL2G11560 Arabidopsis lyrata HOM05D008820 ORTHO05D011139 1.1e-46 190.3 147 66.7
AT1G63670 Arabidopsis thaliana HOM05D008820 ORTHO05D011139 3.3e-46 188.7 147 66.0
Carub.0002s0118 Capsella rubella HOM05D008820 ORTHO05D011139 9.6e-46 187.2 156 61.5
Aa31LG2G880 Aethionema arabicum HOM05D008820 ORTHO05D011139 4.2e-41 171.8 151 58.9
THA.LOC104817974 Tarenaya hassleriana HOM05D008820 ORTHO05D011139 2.2e-26 122.9 146 48.6
C07p02790 Brassica napus HOM05D008820 ORTHO05D011139 8.8e-23 110.9 62 85.5
THA.LOC104823587 Tarenaya hassleriana HOM05D008820 ORTHO05D011139 3.1e-20 102.4 145 42.1
BcaC01g00975 Brassica carinata HOM05D008820 ORTHO05D011139 4.8e-13 78.6 41 95.1
A07p03780 Brassica napus HOM05D008820 ORTHO05D011139 8.2e-13 77.8 43 83.7
BolC1t01424H Brassica oleracea HOM05D008820 ORTHO05D011139 8.2e-13 77.8 93 45.2
BraA07t28167Z Brassica rapa HOM05D008820 ORTHO05D011139 8.2e-13 77.8 43 83.7
BraA07t28170Z Brassica rapa HOM05D008820 ORTHO05D011139 8.2e-13 77.8 43 83.7
BraA07t28172Z Brassica rapa HOM05D008820 ORTHO05D011139 8.2e-13 77.8 43 83.7
BraA06t24331Z Brassica rapa HOM05D008820 ORTHO05D011139 2.0e-11 73.2 41 82.9
BcaB05g22617 Brassica carinata HOM05D008820 ORTHO05D011139 7.7e-11 71.2 35 91.4
Gohir.D08G201600 Gossypium hirsutum HOM05D002082 ORTHO05D011139 2.3e-07 59.7 128 26.6
Gorai.004G212500 Gossypium raimondii HOM05D002082 ORTHO05D011139 2.3e-07 59.7 128 26.6
Gohir.A08G183050 Gossypium hirsutum HOM05D002082 ORTHO05D011139 4.0e-07 58.9 128 25.0
FAN13G1469 Fragaria x ananassa HOM05D002082 ORTHO05D002130 6.7e-07 58.2 142 24.6
Manes.01G059400 Manihot esculenta HOM05D002082 ORTHO05D002130 8.8e-07 57.8 150 26.0
Actinidia33420 Actinidia chinensis HOM05D002082 ORTHO05D002130 1.2e-06 57.4 150 29.3
Actinidia12703 Actinidia chinensis HOM05D002082 ORTHO05D002130 3.3e-06 55.8 129 30.2
CSS0003251 Camellia sinensis var. sinensis HOM05D002082 ORTHO05D002130 3.3e-06 55.8 128 35.2
Actinidia10009 Actinidia chinensis HOM05D002082 ORTHO05D002130 5.7e-06 55.1 130 33.8
CiPaw.01G061400 Carya illinoinensis HOM05D002082 ORTHO05D002130 7.5e-06 54.7 127 31.5
Eucgr.E00627 Eucalyptus grandis HOM05D002082 ORTHO05D002130 7.5e-06 54.7 132 28.8
CANSAT21G1957 Cannabis sativa HOM05D002082 ORTHO05D002130 9.7e-06 54.3 136 31.6
CANSAT56G4299 Cannabis sativa HOM05D002082 ORTHO05D002130 9.7e-06 54.3 136 31.6
Thecc.03G279700 Theobroma cacao HOM05D002082 ORTHO05D002130 9.7e-06 54.3 139 26.6


User provided reference genes

Program Settings