Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C02p19080 Brassica napus HOM05D001603 ORTHO05D001393 4.7e-54 214.2 100 100.0
C02p19130 Brassica napus HOM05D001603 ORTHO05D001393 4.7e-54 214.2 100 100.0
C02p19100 Brassica napus HOM05D001603 ORTHO05D001393 6.8e-53 210.3 100 99.0
BolC2t08042H Brassica oleracea HOM05D001603 ORTHO05D001393 6.8e-53 210.3 100 99.0
C02p18940 Brassica napus HOM05D001603 ORTHO05D001393 1.5e-52 209.1 100 98.0
C02p19040 Brassica napus HOM05D001603 ORTHO05D001393 2.0e-52 208.8 100 98.0
A02p11470 Brassica napus HOM05D001603 ORTHO05D001393 1.1e-50 203.0 100 95.0
BcaC03g14476 Brassica carinata HOM05D001603 ORTHO05D001393 4.6e-49 197.6 122 81.1
BcaC03g14477 Brassica carinata HOM05D001603 ORTHO05D001393 4.6e-49 197.6 122 81.1
BcaC03g14480 Brassica carinata HOM05D001603 ORTHO05D001393 4.6e-49 197.6 122 81.1
A02p11420 Brassica napus HOM05D001603 ORTHO05D001393 4.6e-49 197.6 122 81.1
A02p11430 Brassica napus HOM05D001603 ORTHO05D001393 4.6e-49 197.6 122 81.1
A02p11450 Brassica napus HOM05D001603 ORTHO05D001393 4.6e-49 197.6 122 81.1
C02p18950 Brassica napus HOM05D001603 ORTHO05D001393 4.6e-49 197.6 122 81.1
C02p19030 Brassica napus HOM05D001603 ORTHO05D001393 4.6e-49 197.6 122 81.1
C02p19070 Brassica napus HOM05D001603 ORTHO05D001393 4.6e-49 197.6 122 81.1
C02p19090 Brassica napus HOM05D001603 ORTHO05D001393 4.6e-49 197.6 122 81.1
C02p19110 Brassica napus HOM05D001603 ORTHO05D001393 4.6e-49 197.6 122 81.1
BolC2t08038H Brassica oleracea HOM05D001603 ORTHO05D001393 4.6e-49 197.6 122 81.1
BolC2t08041H Brassica oleracea HOM05D001603 ORTHO05D001393 4.6e-49 197.6 122 81.1
BolC2t08043H Brassica oleracea HOM05D001603 ORTHO05D001393 4.6e-49 197.6 122 81.1
C02p18930 Brassica napus HOM05D001603 ORTHO05D001393 6.0e-49 197.2 122 80.3
C02p18990 Brassica napus HOM05D001603 ORTHO05D001393 7.8e-49 196.8 122 80.3
BolC2t08034H Brassica oleracea HOM05D001603 ORTHO05D001393 1.0e-48 196.4 122 80.3
BcaC03g14478 Brassica carinata HOM05D001603 ORTHO05D001393 1.3e-48 196.1 122 80.3
BraA02t06212Z Brassica rapa HOM05D001603 ORTHO05D001393 1.3e-48 196.1 122 80.3
C02p19050 Brassica napus HOM05D001603 ORTHO05D001393 1.7e-48 195.7 122 80.3
A02p11440 Brassica napus HOM05D001603 ORTHO05D001393 2.3e-48 195.3 122 80.3
BraA02t06205Z Brassica rapa HOM05D001603 ORTHO05D001393 2.3e-48 195.3 122 79.5
BraA02t06207Z Brassica rapa HOM05D001603 ORTHO05D001393 3.0e-48 194.9 122 78.7
C02p18920 Brassica napus HOM05D001603 ORTHO05D001393 5.1e-48 194.1 122 79.5
A02p11460 Brassica napus HOM05D001603 ORTHO05D001393 6.6e-48 193.7 122 80.3
BolC2t08037H Brassica oleracea HOM05D001603 ORTHO05D001393 6.6e-48 193.7 122 80.3
BcaC03g14475 Brassica carinata HOM05D001603 ORTHO05D001393 8.6e-48 193.4 122 79.5
A02p11400 Brassica napus HOM05D001603 ORTHO05D001393 8.6e-48 193.4 122 79.5
C02p19000 Brassica napus HOM05D001603 ORTHO05D001393 1.1e-47 193.0 122 79.5
C02p19140 Brassica napus HOM05D001603 ORTHO05D001393 1.1e-47 193.0 122 79.5
BraA02t06208Z Brassica rapa HOM05D001603 ORTHO05D001393 1.1e-47 193.0 122 78.7
C02p18980 Brassica napus HOM05D001603 ORTHO05D001393 1.9e-47 192.2 122 79.5
BraA02t06210Z Brassica rapa HOM05D001603 ORTHO05D001393 1.9e-47 192.2 122 78.7
BcaC03g14474 Brassica carinata HOM05D001603 ORTHO05D001393 2.5e-47 191.8 122 78.7
BolC2t08033H Brassica oleracea HOM05D001603 ORTHO05D001393 2.5e-47 191.8 122 78.7
BraA02t06209Z Brassica rapa HOM05D001603 ORTHO05D001393 2.5e-47 191.8 122 78.7
C02p18970 Brassica napus HOM05D001603 ORTHO05D001393 4.3e-47 191.0 122 79.5
BraA02t06204Z Brassica rapa HOM05D001603 ORTHO05D001393 5.6e-47 190.7 122 78.7
BolC2t08039H Brassica oleracea HOM05D001603 ORTHO05D001393 1.6e-46 189.1 122 79.5
BcaC03g14473 Brassica carinata HOM05D001603 ORTHO05D001393 2.1e-46 188.7 122 77.9
BraA02t06206Z Brassica rapa HOM05D001603 ORTHO05D001393 4.7e-46 187.6 122 77.9
BolC2t08036H Brassica oleracea HOM05D001603 ORTHO05D001393 5.2e-45 184.1 122 77.0
BcaB05g21994 Brassica carinata HOM05D001603 ORTHO05D001393 1.2e-44 183.0 122 75.4
BolC2t08044H Brassica oleracea HOM05D001603 ORTHO05D001393 1.5e-44 182.6 122 77.0
C02p19020 Brassica napus HOM05D001603 ORTHO05D001393 3.4e-44 181.4 122 77.0
BcaB05g21995 Brassica carinata HOM05D001603 ORTHO05D001393 9.9e-44 179.9 122 74.6
BcaC03g14479 Brassica carinata HOM05D001603 ORTHO05D001393 8.3e-43 176.8 100 87.0
BraA02t06211Z Brassica rapa HOM05D001603 ORTHO05D001393 2.4e-42 175.3 111 78.4
A02p11410 Brassica napus HOM05D001603 ORTHO05D001393 7.8e-41 170.2 109 78.9
Sp6g15130 Schrenkiella parvula HOM05D001603 ORTHO05D001393 3.3e-39 164.9 122 66.4
Carub.0004s0795 Capsella rubella HOM05D001603 ORTHO05D001393 3.6e-38 161.4 122 63.1
AT5G52975 Arabidopsis thaliana HOM05D001603 ORTHO05D001393 4.7e-38 161.0 123 65.0
Thhalv10005396m.g Eutrema salsugineum HOM05D001603 ORTHO05D001393 6.2e-38 160.6 122 65.6
AL8G27490 Arabidopsis lyrata HOM05D001603 ORTHO05D001393 1.4e-37 159.5 122 63.9
AL8G27470 Arabidopsis lyrata HOM05D001603 ORTHO05D001393 1.8e-37 159.1 122 63.9
Thhalv10005546m.g Eutrema salsugineum HOM05D001603 ORTHO05D001393 1.8e-37 159.1 122 64.8
CARHR265940 Cardamine hirsuta HOM05D001603 ORTHO05D001393 2.4e-37 158.7 123 65.9
AT5G52965 Arabidopsis thaliana HOM05D001603 ORTHO05D001393 2.6e-36 155.2 122 62.3
AL4G21270 Arabidopsis lyrata HOM05D001603 ORTHO05D001393 4.4e-36 154.5 122 63.1
Thhalv10029475m.g Eutrema salsugineum HOM05D001603 ORTHO05D001393 7.6e-36 153.7 122 63.1
AL8G27510 Arabidopsis lyrata HOM05D001603 ORTHO05D001393 1.3e-35 152.9 122 63.1
CARHR119910 Cardamine hirsuta HOM05D001603 ORTHO05D001393 1.7e-35 152.5 122 62.3
C02p19010 Brassica napus HOM05D001603 ORTHO05D001393 8.4e-35 150.2 73 97.3
Carub.0008s1317 Capsella rubella HOM05D001603 ORTHO05D001393 1.1e-34 149.8 122 60.7
BcaC03g14471 Brassica carinata HOM05D001603 ORTHO05D001393 1.9e-34 149.1 95 74.7
Carub.0008s0802 Capsella rubella HOM05D001603 ORTHO05D001393 4.2e-34 147.9 122 59.8
Carub.0008s2423 Capsella rubella HOM05D001603 ORTHO05D001393 7.1e-34 147.1 122 59.8
Sp6g09890 Schrenkiella parvula HOM05D001603 ORTHO05D001393 1.6e-33 146.0 122 59.8
CARHR265960 Cardamine hirsuta HOM05D001603 ORTHO05D001393 2.7e-33 145.2 123 61.0
AT2G27315 Arabidopsis thaliana HOM05D001603 ORTHO05D001393 3.0e-32 141.7 122 59.8
A02p42790 Brassica napus HOM05D001603 ORTHO05D001393 5.1e-32 141.0 122 58.2
BraA02t09205Z Brassica rapa HOM05D001603 ORTHO05D001393 5.1e-32 141.0 122 58.2
C03p34370 Brassica napus HOM05D001603 ORTHO05D001393 1.5e-28 129.4 122 55.7
BolC3t15747H Brassica oleracea HOM05D001603 ORTHO05D001393 1.5e-28 129.4 122 55.7
A03p28440 Brassica napus HOM05D001603 ORTHO05D001393 2.0e-28 129.0 122 55.7
BraA03t12049Z Brassica rapa HOM05D001603 ORTHO05D001393 2.0e-28 129.0 122 55.7
CARHR266380 Cardamine hirsuta HOM05D001603 ORTHO05D001393 3.8e-27 124.8 107 57.0
AT2G14378 Arabidopsis thaliana HOM05D001603 ORTHO05D001393 4.9e-27 124.4 117 52.1
AT4G35165 Arabidopsis thaliana HOM05D001603 ORTHO05D001393 8.4e-27 123.6 117 51.3
Carub.0007s0514 Capsella rubella HOM05D001603 ORTHO05D001393 8.4e-27 123.6 121 50.4
Carub.0008s1315 Capsella rubella HOM05D001603 ORTHO05D001393 1.1e-26 123.2 102 59.8
AL7G16040 Arabidopsis lyrata HOM05D001603 ORTHO05D001393 4.2e-26 121.3 116 51.7
Carub.0008s2422 Capsella rubella HOM05D001603 ORTHO05D001393 4.6e-25 117.9 121 50.4
BolC2t08040H Brassica oleracea HOM05D001603 ORTHO05D001393 6.0e-25 117.5 59 98.3
Thhalv10029307m.g Eutrema salsugineum HOM05D001603 ORTHO05D001393 1.0e-24 116.7 99 60.6
Thhalv10005657m.g Eutrema salsugineum HOM05D001603 ORTHO05D001393 3.9e-24 114.8 120 50.8
BcaB07g30090 Brassica carinata HOM05D001603 ORTHO05D001393 6.6e-24 114.0 112 51.8
Thhalv10029285m.g Eutrema salsugineum HOM05D001603 ORTHO05D001393 6.6e-24 114.0 97 59.8
CARHR243480 Cardamine hirsuta HOM05D001603 ORTHO05D001393 3.3e-23 111.7 116 47.4
AL8G40580 Arabidopsis lyrata HOM05D001603 ORTHO05D001393 5.6e-23 110.9 118 48.3
A06p40030 Brassica napus HOM05D001603 ORTHO05D001393 7.3e-23 110.5 111 48.6
BraA06t26918Z Brassica rapa HOM05D001603 ORTHO05D001393 7.3e-23 110.5 111 48.6
BcaC06g33682 Brassica carinata HOM05D001603 ORTHO05D001393 2.1e-22 109.0 111 49.5
C07p38140 Brassica napus HOM05D001603 ORTHO05D001393 2.1e-22 109.0 111 49.5
BolC7t44336H Brassica oleracea HOM05D001603 ORTHO05D001393 4.8e-22 107.8 111 49.5
CARHR277370 Cardamine hirsuta HOM05D001603 ORTHO05D001393 8.1e-22 107.1 113 47.8
Aa31LG5G23090 Aethionema arabicum HOM05D001603 ORTHO05D001393 2.4e-21 105.5 118 49.2
CARHR042990 Cardamine hirsuta HOM05D001603 ORTHO05D001393 3.1e-21 105.1 114 45.6
Thhalv10005158m.g Eutrema salsugineum HOM05D001603 ORTHO05D001393 4.0e-21 104.8 115 46.1
AT3G48675 Arabidopsis thaliana HOM05D001603 ORTHO05D001393 2.6e-20 102.1 105 48.6
Sp2g17840 Schrenkiella parvula HOM05D001603 ORTHO05D001393 3.4e-20 101.7 120 47.5
C02p62770 Brassica napus HOM05D001603 ORTHO05D001393 3.2e-18 95.1 113 43.4
BolC2t12348H Brassica oleracea HOM05D001603 ORTHO05D001393 3.2e-18 95.1 113 43.4
A02p42780 Brassica napus HOM05D001603 ORTHO05D001393 1.2e-17 93.2 112 42.9
BraA02t09204Z Brassica rapa HOM05D001603 ORTHO05D001393 1.2e-17 93.2 112 42.9
Carub.0008s1450 Capsella rubella HOM05D001603 ORTHO05D001393 3.5e-17 91.7 117 42.7
AT5G54062 Arabidopsis thaliana HOM05D001603 ORTHO05D001393 4.6e-17 91.3 117 41.0
AL5G28100 Arabidopsis lyrata HOM05D001603 ORTHO05D001393 6.0e-17 90.9 113 45.1
BcaB07g29691 Brassica carinata HOM05D001603 ORTHO05D001393 6.0e-17 90.9 83 53.0
BcaC03g18210 Brassica carinata HOM05D001603 ORTHO05D001393 1.0e-16 90.1 76 53.9
Thecc.09G136800 Theobroma cacao HOM05D001603 ORTHO05D001393 1.3e-16 89.7 128 37.5
AT5G53905 Arabidopsis thaliana HOM05D001603 ORTHO05D001393 1.8e-16 89.4 71 54.9
CARHR157430 Cardamine hirsuta HOM05D001603 ORTHO05D001393 1.8e-16 89.4 112 41.1
Duzib187G1932 Durio zibethinus HOM05D001603 ORTHO05D001393 2.3e-16 89.0 125 37.6
Carub.0008s1404 Capsella rubella HOM05D001603 ORTHO05D001393 3.9e-16 88.2 119 42.9
Carub.0008s1421 Capsella rubella HOM05D001603 ORTHO05D001393 3.9e-16 88.2 117 39.3
THA.LOC104807891 Tarenaya hassleriana HOM05D001603 ORTHO05D001393 1.1e-15 86.7 112 39.3
THA.LOC104807824 Tarenaya hassleriana HOM05D001603 ORTHO05D001393 1.5e-15 86.3 112 39.3
C03p17510 Brassica napus HOM05D001603 ORTHO05D001393 1.9e-15 85.9 112 38.4
BolC3t14164H Brassica oleracea HOM05D001603 ORTHO05D001393 1.9e-15 85.9 112 38.4
Thhalv10016069m.g Eutrema salsugineum HOM05D001603 ORTHO05D001393 1.9e-15 85.9 110 42.7
Carub.0008s1435 Capsella rubella HOM05D001603 ORTHO05D001393 2.5e-15 85.5 87 47.1
A03p15020 Brassica napus HOM05D001603 ORTHO05D001393 4.3e-15 84.7 112 38.4
BraA03t10796Z Brassica rapa HOM05D001603 ORTHO05D001393 4.3e-15 84.7 112 38.4
BcaC02g08400 Brassica carinata HOM05D001603 ORTHO05D001393 1.3e-14 83.2 112 42.0
BcaC02g08407 Brassica carinata HOM05D001603 ORTHO05D001393 1.3e-14 83.2 112 42.0
BolC4t27006H Brassica oleracea HOM05D001603 ORTHO05D001393 1.3e-14 83.2 112 42.0
BolC4t27013H Brassica oleracea HOM05D001603 ORTHO05D001393 1.3e-14 83.2 112 42.0
BcaC02g08401 Brassica carinata HOM05D001603 ORTHO05D001393 1.6e-14 82.8 112 42.0
BolC4t27011H Brassica oleracea HOM05D001603 ORTHO05D001393 1.6e-14 82.8 112 42.0
CARHR267040 Cardamine hirsuta HOM05D001603 ORTHO05D001393 2.1e-14 82.4 110 39.1
BcaC01g06264 Brassica carinata HOM05D001603 ORTHO05D001393 2.8e-14 82.0 112 37.5
C04p54650 Brassica napus HOM05D001603 ORTHO05D001393 3.7e-14 81.6 112 42.0
BolC4t27003H Brassica oleracea HOM05D001603 ORTHO05D001393 3.7e-14 81.6 112 41.1
C04p54690 Brassica napus HOM05D001603 ORTHO05D001393 8.1e-14 80.5 112 41.1
C04p54670 Brassica napus HOM05D001603 ORTHO05D001393 1.4e-13 79.7 110 41.8
RcHm_v2.0_Chr2g0087141 Rosa chinensis HOM05D001603 ORTHO05D001393 1.4e-13 79.7 107 38.3
THA.LOC104807823 Tarenaya hassleriana HOM05D001603 ORTHO05D001393 1.4e-13 79.7 109 36.7
BcaC02g08403 Brassica carinata HOM05D001603 ORTHO05D001393 3.1e-13 78.6 112 41.1
BcaC02g08405 Brassica carinata HOM05D001603 ORTHO05D001393 3.1e-13 78.6 105 41.9
THA.LOC104809119 Tarenaya hassleriana HOM05D001603 ORTHO05D001393 4.0e-13 78.2 112 35.7
C04p54600 Brassica napus HOM05D001603 ORTHO05D001393 5.3e-13 77.8 112 41.1
Duzib187G1233 Durio zibethinus HOM05D001603 ORTHO05D001393 5.3e-13 77.8 115 38.3
BolC2t08032H Brassica oleracea HOM05D001603 ORTHO05D001393 6.9e-13 77.4 121 41.3
CARHR267050 Cardamine hirsuta HOM05D001603 ORTHO05D001393 6.9e-13 77.4 71 49.3
RcHm_v2.0_Chr2g0131241 Rosa chinensis HOM05D001603 ORTHO05D001393 6.9e-13 77.4 108 38.0
C04p53860 Brassica napus HOM05D001603 ORTHO05D001393 2.0e-12 75.9 81 48.1
RcHm_v2.0_Chr2g0131221 Rosa chinensis HOM05D001603 ORTHO05D001393 2.0e-12 75.9 108 37.0
BcaB01g04253 Brassica carinata HOM05D001603 ORTHO05D001393 2.6e-12 75.5 70 51.4
RcHm_v2.0_Chr2g0087131 Rosa chinensis HOM05D001603 ORTHO05D001393 2.6e-12 75.5 118 39.0
THA.LOC104801737 Tarenaya hassleriana HOM05D001603 ORTHO05D001393 5.8e-12 74.3 112 36.6
FvH4_4g12560 Fragaria vesca HOM05D001603 ORTHO05D001393 1.7e-11 72.8 109 40.4
FAN12G3546 Fragaria x ananassa HOM05D001603 ORTHO05D001393 1.7e-11 72.8 109 40.4
RcHm_v2.0_Chr2g0131141 Rosa chinensis HOM05D001603 ORTHO05D001393 2.2e-11 72.4 108 36.1
AT5G53742 Arabidopsis thaliana HOM05D001603 ORTHO05D001393 2.9e-11 72.0 79 45.6
FAN17G1385 Fragaria x ananassa HOM05D001603 ORTHO05D001393 1.4e-10 69.7 112 38.4
FvH4_1g02090 Fragaria vesca HOM05D001603 ORTHO05D001393 1.9e-10 69.3 112 36.6
RcHm_v2.0_Chr2g0149601 Rosa chinensis HOM05D001603 ORTHO05D001393 2.5e-10 68.9 114 35.1
FAN22G0761 Fragaria x ananassa HOM05D001603 ORTHO05D001393 4.2e-10 68.2 112 38.4
C02p19060 Brassica napus HOM05D001603 ORTHO05D001393 7.1e-10 67.4 38 92.1
FAN07G1734 Fragaria x ananassa HOM05D001603 ORTHO05D001393 1.2e-09 66.6 112 37.5
CARHR154350 Cardamine hirsuta HOM05D001603 ORTHO05D001393 1.6e-09 66.2 72 43.1
FAN19G2115 Fragaria x ananassa HOM05D001603 ORTHO05D001393 1.6e-09 66.2 112 35.7
FAN06G4924 Fragaria x ananassa HOM05D001603 ORTHO05D001393 7.9e-09 63.9 109 36.7
CiPaw.03G252200 Carya illinoinensis HOM05D001603 ORTHO05D001393 1.0e-08 63.5 118 33.1
Atru.chr11.1201 Acer truncatum HOM05D001603 ORTHO05D001393 3.0e-08 62.0 111 34.2
RcHm_v2.0_Chr1g0323971 Rosa chinensis HOM05D001603 ORTHO05D001393 5.1e-08 61.2 110 31.8
vmacro07747 Vaccinium macrocarpon HOM05D001603 ORTHO05D001393 1.1e-07 60.1 101 33.7
Atru.chr11.1514 Acer truncatum HOM05D001603 ORTHO05D001393 3.3e-07 58.5 115 33.0
Aqoxy1G00790 Aquilegia oxysepala HOM05D001603 ORTHO05D001393 3.3e-07 58.5 86 36.0
FAN05G1005 Fragaria x ananassa HOM05D001603 ORTHO05D001393 4.3e-07 58.2 81 39.5
FAN28G2563 Fragaria x ananassa HOM05D001603 ORTHO05D001393 4.3e-07 58.2 91 39.6
Aqoxy6G02757 Aquilegia oxysepala HOM05D001603 ORTHO05D001393 7.4e-07 57.4 72 36.1
COL.COLO4_33371 Corchorus olitorius HOM05D001603 ORTHO05D001393 7.4e-07 57.4 86 34.9
THA.LOC104811299 Tarenaya hassleriana HOM05D001603 ORTHO05D001393 7.4e-07 57.4 132 30.3
THA.LOC104811131 Tarenaya hassleriana HOM05D001603 ORTHO05D001393 9.6e-07 57.0 132 30.3
TWI34G1934 Tripterygium wilfordii HOM05D001603 ORTHO05D001393 9.6e-07 57.0 75 36.0
FAN26G1312 Fragaria x ananassa HOM05D001603 ORTHO05D001393 1.3e-06 56.6 90 34.4
Thecc.09G136900 Theobroma cacao HOM05D001603 ORTHO05D001393 1.6e-06 56.2 74 37.8
CARHR042770 Cardamine hirsuta HOM05D001603 ORTHO05D001393 3.7e-06 55.1 118 31.4
FvH4_1g09740 Fragaria vesca HOM05D001603 ORTHO05D001393 3.7e-06 55.1 115 35.7
Atru.chr7.1960 Acer truncatum HOM05D001603 ORTHO05D001393 6.2e-06 54.3 82 34.1
Aqoxy6G02760 Aquilegia oxysepala HOM05D001603 ORTHO05D001393 8.2e-06 53.9 70 38.6
AT4G09545 Arabidopsis thaliana HOM05D001603 ORTHO05D001393 8.2e-06 53.9 115 33.9


User provided reference genes

Program Settings