Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C02p17040 Brassica napus HOM05D004279 ORTHO05D004979 5.3e-162 574.3 294 100.0
BolC2t07801H Brassica oleracea HOM05D004279 ORTHO05D004979 7.9e-158 560.5 294 98.3
BraA02t06098Z Brassica rapa HOM05D004279 ORTHO05D004979 3.9e-157 558.1 294 97.6
A02p10310 Brassica napus HOM05D004279 ORTHO05D004979 6.7e-157 557.4 294 97.6
Sp6g16410 Schrenkiella parvula HOM05D004279 ORTHO05D004979 1.4e-151 539.7 294 94.6
BcaB05g22132 Brassica carinata HOM05D004279 ORTHO05D004979 4.2e-151 538.1 294 94.2
CARHR267680 Cardamine hirsuta HOM05D004279 ORTHO05D004979 1.2e-150 536.6 294 93.9
BcaC03g14314 Brassica carinata HOM05D004279 ORTHO05D004979 3.0e-149 531.9 282 97.5
AL8G29740 Arabidopsis lyrata HOM05D004279 ORTHO05D004979 2.4e-146 522.3 295 91.2
AT5G54400 Arabidopsis thaliana HOM05D004279 ORTHO05D004979 1.2e-145 520.0 295 90.8
Carub.0008s1473 Capsella rubella HOM05D004279 ORTHO05D004979 7.7e-145 517.3 293 92.2
Aa31LG3G10340 Aethionema arabicum HOM05D004279 ORTHO05D004979 1.7e-139 499.6 296 87.5
Duzib213G0014 Durio zibethinus HOM05D004279 ORTHO05D004979 1.7e-128 463.0 294 80.3
Cpa.g.sc80.101 Carica papaya HOM05D004279 ORTHO05D004979 2.9e-128 462.2 294 79.9
Gohir.D01G054400 Gossypium hirsutum HOM05D004279 ORTHO05D004979 5.0e-128 461.5 294 80.3
Gorai.002G074300 Gossypium raimondii HOM05D004279 ORTHO05D004979 5.0e-128 461.5 294 80.3
Gohir.A01G067200 Gossypium hirsutum HOM05D004279 ORTHO05D004979 3.2e-127 458.8 294 79.9
COL.COLO4_09461 Corchorus olitorius HOM05D004279 ORTHO05D004979 1.0e-125 453.8 294 78.2
THA.LOC104799915 Tarenaya hassleriana HOM05D004279 ORTHO05D004979 1.8e-125 453.0 296 80.1
Thecc.07G074500 Theobroma cacao HOM05D004279 ORTHO05D004979 1.1e-124 450.3 294 78.6
Gohir.A04G027700 Gossypium hirsutum HOM05D004279 ORTHO05D004979 5.7e-124 448.0 294 77.2
Gohir.D05G360400 Gossypium hirsutum HOM05D004279 ORTHO05D004979 5.7e-124 448.0 294 77.6
Gorai.009G432300 Gossypium raimondii HOM05D004279 ORTHO05D004979 9.7e-124 447.2 294 77.6
Duzib268G0928 Durio zibethinus HOM05D004279 ORTHO05D004979 1.7e-123 446.4 294 77.2
BcaB04g20920 Brassica carinata HOM05D004279 ORTHO05D004979 8.2e-123 444.1 294 78.9
BcaC09g48518 Brassica carinata HOM05D004279 ORTHO05D004979 1.4e-122 443.4 294 78.6
BolC1t04855H Brassica oleracea HOM05D004279 ORTHO05D004979 4.1e-122 441.8 294 78.2
CARHR090590 Cardamine hirsuta HOM05D004279 ORTHO05D004979 1.2e-121 440.3 294 78.6
TWI38G1973 Tripterygium wilfordii HOM05D004279 ORTHO05D004979 3.5e-121 438.7 296 76.4
Ciclev10009067m.g Citrus clementina HOM05D004279 ORTHO05D004979 1.0e-120 437.2 288 77.4
CANSAT11G2237 Cannabis sativa HOM05D004279 ORTHO05D004979 1.7e-120 436.4 296 75.3
AT3G15530 Arabidopsis thaliana HOM05D004279 ORTHO05D004979 6.5e-120 434.5 292 77.7
Carub.0003s1526 Capsella rubella HOM05D004279 ORTHO05D004979 6.5e-120 434.5 292 77.7
AL3G28110 Arabidopsis lyrata HOM05D004279 ORTHO05D004979 8.5e-120 434.1 292 77.7
Thhalv10021257m.g Eutrema salsugineum HOM05D004279 ORTHO05D004979 8.5e-120 434.1 292 77.7
THA.LOC104810491 Tarenaya hassleriana HOM05D004279 ORTHO05D004979 8.5e-120 434.1 294 76.9
Potri.001G405200 Populus trichocarpa HOM05D004279 ORTHO05D004979 1.1e-119 433.7 294 76.2
BcaB06g29588 Brassica carinata HOM05D004279 ORTHO05D004979 1.5e-119 433.3 295 76.9
Sabra16G0266200 Salix brachista HOM05D004279 ORTHO05D004979 1.5e-119 433.3 294 75.5
Sp3g13790 Schrenkiella parvula HOM05D004279 ORTHO05D004979 1.5e-119 433.3 294 76.9
TWI39G0076 Tripterygium wilfordii HOM05D004279 ORTHO05D004979 1.5e-119 433.3 294 75.9
BcaC05g28964 Brassica carinata HOM05D004279 ORTHO05D004979 1.9e-119 433.0 294 76.2
C05p51590 Brassica napus HOM05D004279 ORTHO05D004979 1.9e-119 433.0 294 76.2
BolC5t33846H Brassica oleracea HOM05D004279 ORTHO05D004979 1.9e-119 433.0 294 76.2
Aa31LG8G2770 Aethionema arabicum HOM05D004279 ORTHO05D004979 3.2e-119 432.2 294 77.2
A05p33880 Brassica napus HOM05D004279 ORTHO05D004979 3.2e-119 432.2 292 76.7
QL08p019074 Quercus lobata HOM05D004279 ORTHO05D004979 3.2e-119 432.2 297 74.7
Potri.011G128300 Populus trichocarpa HOM05D004279 ORTHO05D004979 9.4e-119 430.6 296 73.3
PGR031G2155 Punica granatum HOM05D004279 ORTHO05D004979 2.1e-118 429.5 295 74.9
BraA05t22210Z Brassica rapa HOM05D004279 ORTHO05D004979 2.7e-118 429.1 292 76.4
Eucgr.F03342 Eucalyptus grandis HOM05D004279 ORTHO05D004979 2.7e-118 429.1 296 74.0
BraA01t03905Z Brassica rapa HOM05D004279 ORTHO05D004979 6.1e-118 427.9 286 78.3
Manes.03G114800 Manihot esculenta HOM05D004279 ORTHO05D004979 1.0e-117 427.2 299 74.6
A01p38550 Brassica napus HOM05D004279 ORTHO05D004979 2.3e-117 426.0 286 78.0
C01p48920 Brassica napus HOM05D004279 ORTHO05D004979 1.5e-116 423.3 286 77.6
Haze_09505 Corylus avellana HOM05D004279 ORTHO05D004979 9.8e-116 420.6 297 74.4
Cfa020528 Carpinus fangiana HOM05D004279 ORTHO05D004979 1.7e-115 419.9 297 74.1
CsaV3_3G044480 Cucumis sativus L. HOM05D004279 ORTHO05D004979 2.2e-115 419.5 296 74.3
ClCG11G018340 Citrullus lanatus HOM05D004279 ORTHO05D004979 2.8e-115 419.1 296 74.3
Manes.15G084500 Manihot esculenta HOM05D004279 ORTHO05D004979 3.7e-115 418.7 299 73.6
MELO3C018223.2 Cucumis melo HOM05D004279 ORTHO05D004979 6.3e-115 417.9 296 74.0
Lj1A851T62 Lonicera japonica HOM05D004279 ORTHO05D004979 8.3e-115 417.5 293 75.1
Eucgr.F01088 Eucalyptus grandis HOM05D004279 ORTHO05D004979 1.1e-114 417.2 292 73.3
Lj3g0025503 Lotus japonicus HOM05D004279 ORTHO05D004979 1.1e-114 417.2 296 73.3
CiPaw.12G122100 Carya illinoinensis HOM05D004279 ORTHO05D004979 9.1e-114 414.1 296 73.3
Peaxi162Scf01111g00012 Petunia axillaris HOM05D004279 ORTHO05D004979 1.6e-113 413.3 292 73.3
THA.LOC104818054 Tarenaya hassleriana HOM05D004279 ORTHO05D004979 1.6e-113 413.3 294 74.1
CiPaw.11G174600 Carya illinoinensis HOM05D004279 ORTHO05D004979 2.0e-113 412.9 298 72.5
Nitab4.5_0000815g0050 Nicotiana tabacum HOM05D004279 ORTHO05D004979 2.0e-113 412.9 292 72.9
FAN16G2997 Fragaria x ananassa HOM05D004279 ORTHO05D004979 3.5e-113 412.1 294 71.8
MD03G1221800 Malus domestica HOM05D004279 ORTHO05D004979 4.5e-113 411.8 294 71.1
FAN21G3274 Fragaria x ananassa HOM05D004279 ORTHO05D004979 7.7e-113 411.0 294 71.4
Ca_01814_v3 Cicer arietinum L. HOM05D004279 ORTHO05D004979 1.3e-112 410.2 294 72.8
Ca_30536_v3 Cicer arietinum L. HOM05D004279 ORTHO05D004979 1.3e-112 410.2 294 72.8
TPR.G38955 Trifolium pratense HOM05D004279 ORTHO05D004979 1.3e-112 410.2 294 72.8
Phvul.005G085300 Phaseolus vulgaris HOM05D004279 ORTHO05D004979 2.2e-112 409.5 294 71.4
FvH4_3g20760 Fragaria vesca HOM05D004279 ORTHO05D004979 2.9e-112 409.1 294 71.4
FAN11G1457 Fragaria x ananassa HOM05D004279 ORTHO05D004979 2.9e-112 409.1 294 71.4
Nitab4.5_0009177g0010 Nicotiana tabacum HOM05D004279 ORTHO05D004979 2.9e-112 409.1 292 72.6
Rhsim04G0018800 Rhododendron simsii HOM05D004279 ORTHO05D004979 2.9e-112 409.1 292 73.6
Dinv22371 Davidia involucrata HOM05D004279 ORTHO05D004979 3.8e-112 408.7 292 74.3
Prupe.4G187700 Prunus persica HOM05D004279 ORTHO05D004979 5.0e-112 408.3 299 71.2
VMungo1080G0833 Vigna mungo HOM05D004279 ORTHO05D004979 5.0e-112 408.3 294 71.1
RcHm_v2.0_Chr5g0034991 Rosa chinensis HOM05D004279 ORTHO05D004979 6.5e-112 407.9 294 71.4
MD11G1239200 Malus domestica HOM05D004279 ORTHO05D004979 1.5e-111 406.8 299 69.9
TAR626G0357 Trochodendron aralioides HOM05D004279 ORTHO05D004979 2.5e-111 406.0 292 72.3
Glyma.12G220600 Glycine max HOM05D004279 ORTHO05D004979 3.2e-111 405.6 294 71.1
PGSC0003DMG400019253 Solanum tuberosum HOM05D004279 ORTHO05D004979 3.2e-111 405.6 292 71.9
Medtr2g080130 Medicago truncatula HOM05D004279 ORTHO05D004979 4.2e-111 405.2 294 72.8
Psat4g016400 Pisum sativum HOM05D004279 ORTHO05D004979 7.2e-111 404.4 294 72.1
Sed0000911 Sechium edule HOM05D004279 ORTHO05D004979 7.2e-111 404.4 296 71.3
FAN25G2565 Fragaria x ananassa HOM05D004279 ORTHO05D004979 9.4e-111 404.1 294 70.7
Migut.H01911 Erythranthe guttata HOM05D004279 ORTHO05D004979 1.2e-110 403.7 297 72.1
Solyc07g063460.3 Solanum lycopersicum HOM05D004279 ORTHO05D004979 1.2e-110 403.7 292 70.5
Sopen07g031640 Solanum pennellii HOM05D004279 ORTHO05D004979 1.2e-110 403.7 292 70.5
CSS0001500 Camellia sinensis var. sinensis HOM05D004279 ORTHO05D004979 1.6e-110 403.3 292 73.3
Hma1.2p1_1143F.1_g261130 Hydrangea macrophylla HOM05D004279 ORTHO05D004979 1.6e-110 403.3 293 70.0
MSTRG.12925 Avicennia marina HOM05D004279 ORTHO05D004979 2.7e-110 402.5 300 71.7
Lsat_1_v5_gn_5_7280 Lactuca sativa HOM05D004279 ORTHO05D004979 2.7e-110 402.5 292 72.9
Cc05_g12550 Coffea canephora HOM05D004279 ORTHO05D004979 4.7e-110 401.7 297 71.4
Sed0021920 Sechium edule HOM05D004279 ORTHO05D004979 1.0e-109 400.6 297 71.4
Aqoxy4G01310 Aquilegia oxysepala HOM05D004279 ORTHO05D004979 1.4e-109 400.2 294 71.1
HanXRQChr05g0156561 Helianthus annuus HOM05D004279 ORTHO05D004979 1.4e-109 400.2 292 71.9
MSTRG.14375 Avicennia marina HOM05D004279 ORTHO05D004979 2.3e-109 399.4 300 71.3
Nn1g03957 Nelumbo nucifera HOM05D004279 ORTHO05D004979 4.0e-109 398.7 293 70.0
Hma1.2p1_1274F.1_g271930 Hydrangea macrophylla HOM05D004279 ORTHO05D004979 6.8e-109 397.9 285 71.2
DCAR_009977 Daucus carota HOM05D004279 ORTHO05D004979 3.4e-108 395.6 292 71.2
ECA236G3281 Erigeron canadensis HOM05D004279 ORTHO05D004979 7.5e-108 394.4 292 70.2
SalBow7G1458 Salvia bowleyana HOM05D004279 ORTHO05D004979 7.5e-108 394.4 292 71.9
Oeu008023.1 Olea europaea HOM05D004279 ORTHO05D004979 3.7e-107 392.1 298 68.8
Nn1g06689 Nelumbo nucifera HOM05D004279 ORTHO05D004979 4.9e-107 391.7 286 70.6
Actinidia35269 Actinidia chinensis HOM05D004279 ORTHO05D004979 6.3e-107 391.3 293 70.3
CSS0025917 Camellia sinensis var. sinensis HOM05D004279 ORTHO05D004979 6.3e-107 391.3 293 71.3
Thhalv10014468m.g Eutrema salsugineum HOM05D004279 ORTHO05D004979 1.8e-106 389.8 216 93.5
Dinv08329 Davidia involucrata HOM05D004279 ORTHO05D004979 2.4e-106 389.4 280 74.3
Sc16g0006820 Simmondsia chinensis HOM05D004279 ORTHO05D004979 3.1e-106 389.0 298 70.1
Oeu055672.1 Olea europaea HOM05D004279 ORTHO05D004979 7.0e-106 387.9 298 68.1
Lalb_Chr01g0016991 Lupinus albus HOM05D004279 ORTHO05D004979 9.2e-106 387.5 297 70.0
PSO210G3340 Papaver somniferum HOM05D004279 ORTHO05D004979 9.2e-106 387.5 295 69.2
PSO832G3402 Papaver somniferum HOM05D004279 ORTHO05D004979 3.5e-105 385.6 295 68.8
HanXRQChr13g0386401 Helianthus annuus HOM05D004279 ORTHO05D004979 5.9e-105 384.8 285 70.9
SHI28037 Sapria himalayana HOM05D004279 ORTHO05D004979 1.1e-103 380.6 287 68.6
SGA_v2.0_scaffold9G04950 Striga asiatica HOM05D004279 ORTHO05D004979 4.3e-103 378.6 298 69.1
Actinidia18754 Actinidia chinensis HOM05D002936 ORTHO05D004979 4.7e-102 375.2 287 69.7
DCAR_022481 Daucus carota HOM05D004279 ORTHO05D004979 2.3e-101 372.9 292 66.8
TAR624G0257 Trochodendron aralioides HOM05D004279 ORTHO05D004979 3.0e-101 372.5 274 70.1
SGA_v2.0_scaffold73G24305 Striga asiatica HOM05D004279 ORTHO05D004979 2.9e-99 365.9 288 66.0
Ah.06g183670 Amaranthus hybridus HOM05D004279 ORTHO05D004979 3.7e-99 365.5 304 64.5
unitig_0.g2258 Utricularia gibba HOM05D004279 ORTHO05D004979 6.4e-99 364.8 297 65.3
CSS0045555 Camellia sinensis var. sinensis HOM05D004279 ORTHO05D004979 1.1e-98 364.0 293 68.6
Lalb_Chr25g0286631 Lupinus albus HOM05D004279 ORTHO05D004979 1.8e-98 363.2 298 67.4
MBI02_g29384_MAGBIO Magnolia biondii HOM05D004279 ORTHO05D004979 3.2e-98 362.5 291 65.3
AUR62029338 Chenopodium quinoa HOM05D004279 ORTHO05D004979 8.6e-96 354.4 303 63.7
AUR62015623 Chenopodium quinoa HOM05D004279 ORTHO05D004979 9.5e-95 350.9 303 62.7
Lsat_1_v5_gn_7_105700 Lactuca sativa HOM05D004279 ORTHO05D004979 4.7e-94 348.6 293 65.5
Glyma.06G249400 Glycine max HOM05D004279 ORTHO05D004979 3.1e-93 345.9 295 63.4
Glyma.12G148500 Glycine max HOM05D004279 ORTHO05D004979 4.0e-93 345.5 295 63.7
EL10Ac4g08091 Beta vulgaris HOM05D004279 ORTHO05D004979 5.2e-93 345.1 300 61.3
CSS0022309 Camellia sinensis var. sinensis HOM05D004279 ORTHO05D004979 6.8e-93 344.7 292 65.4
Phvul.011G148200 Phaseolus vulgaris HOM05D004279 ORTHO05D004979 8.9e-93 344.4 295 64.7
VMungo1127G1925 Vigna mungo HOM05D004279 ORTHO05D004979 5.4e-90 335.1 295 61.7
Glyma.13G280900 Glycine max HOM05D004279 ORTHO05D004979 3.9e-88 328.9 294 61.9
SHI18877 Sapria himalayana HOM05D004279 ORTHO05D004979 2.8e-86 322.8 264 64.4
ECA246G0789 Erigeron canadensis HOM05D004279 ORTHO05D004979 2.0e-84 316.6 247 67.6
HPP92_016704 Vanilla planifolia HOM05D004279 ORTHO05D004979 5.4e-82 308.5 292 58.9
SHI27994 Sapria himalayana HOM05D004279 ORTHO05D004979 2.0e-76 290.0 282 56.7
SHI27902 Sapria himalayana HOM05D004279 ORTHO05D004979 1.3e-72 277.3 294 52.7
SHI27891 Sapria himalayana HOM05D004279 ORTHO05D004979 1.6e-70 270.4 270 54.4
GSVIVG01014410001 Vitis vinifera HOM05D004279 ORTHO05D004979 9.3e-66 254.6 197 70.6
Atru.chr2.2812 Acer truncatum HOM05D004279 ORTHO05D004979 3.4e-60 236.1 143 79.7
Mapoly0019s0089 Marchantia polymorpha HOM05D004279 ORTHO05D004979 6.4e-59 231.9 284 47.2
SHI28023 Sapria himalayana HOM05D004279 ORTHO05D004979 1.9e-58 230.3 275 51.6
ATR0693G409 Amborella trichopoda HOM05D004279 ORTHO05D004979 6.0e-57 225.3 279 50.2
HanXRQChr08g0235661 Helianthus annuus HOM05D004279 ORTHO05D004979 3.9e-48 196.1 128 71.1
VMungo1127G2040 Vigna mungo HOM05D004279 ORTHO05D004979 1.9e-47 193.7 150 65.3
HanXRQChr08g0235651 Helianthus annuus HOM05D004279 ORTHO05D004979 1.6e-46 190.7 169 64.5
CAN.G162.92 Capsicum annuum HOM05D004279 ORTHO05D004979 1.0e-40 171.4 147 64.6
Atru.chr2.2813 Acer truncatum HOM05D004279 ORTHO05D004979 3.8e-27 126.3 102 70.6
Haze_01531 Corylus avellana HOM05D004279 ORTHO05D004979 3.9e-24 116.3 109 61.5
Haze_12044 Corylus avellana HOM05D004279 ORTHO05D004979 3.3e-23 113.2 109 60.6
CBR_g24389 Chara braunii HOM05D004279 ORTHO05D004979 4.4e-23 112.8 333 27.3
QL06p019554 Quercus lobata HOM05D004279 ORTHO05D004979 3.1e-21 106.7 71 77.5
Haze_10444 Corylus avellana HOM05D004279 ORTHO05D004979 1.3e-19 101.3 99 61.6
SHI28022 Sapria himalayana HOM05D004279 ORTHO05D004979 5.7e-15 85.9 73 58.9
Haze_13283 Corylus avellana HOM05D004279 ORTHO05D004979 8.0e-09 65.5 88 51.1
Haze_06332 Corylus avellana HOM05D004279 ORTHO05D004979 1.8e-08 64.3 72 54.2


User provided reference genes

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