Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C02p16680 Brassica napus HOM05D000003 ORTHO05D016452 9.0e-50 199.9 98 100.0
BolC2t07774H Brassica oleracea HOM05D000003 ORTHO05D016452 2.9e-48 194.9 98 96.9
BcaC01g02365 Brassica carinata HOM05D000003 ORTHO05D001498 4.0e-21 104.8 97 54.6
BcaB01g00785 Brassica carinata HOM05D010131 ORTHO05D011793 2.0e-20 102.4 89 53.9
BcaC09g51068 Brassica carinata HOM05D000003 ORTHO05D001498 4.5e-17 91.3 94 48.9
BcaC05g28885 Brassica carinata HOM05D010131 ORTHO05D011793 1.7e-16 89.4 96 45.8
BcaB01g06093 Brassica carinata HOM05D000003 ORTHO05D001498 3.2e-15 85.1 96 49.0
Carub.0002s0756 Capsella rubella HOM05D000003 ORTHO05D000006 1.8e-13 79.3 96 41.7
BcaC04g19261 Brassica carinata HOM05D000003 ORTHO05D001498 4.0e-13 78.2 94 42.6
BcaB04g18843 Brassica carinata HOM05D000003 ORTHO05D001498 1.2e-12 76.6 96 39.6
Sp7g10830 Schrenkiella parvula HOM05D000496 ORTHO05D016452 1.5e-12 76.3 87 41.4
BcaC03g17182 Brassica carinata HOM05D000003 ORTHO05D000006 3.4e-12 75.1 96 37.5
BcaC09g51548 Brassica carinata HOM05D000003 ORTHO05D000006 5.7e-12 74.3 96 38.5
Aa31sc56G70 Aethionema arabicum HOM05D000003 ORTHO05D000004 9.8e-12 73.6 97 38.1
Aa31sc85G90 Aethionema arabicum HOM05D000003 ORTHO05D000006 9.8e-12 73.6 95 35.8
BcaB05g24840 Brassica carinata HOM05D000003 ORTHO05D001498 1.3e-11 73.2 95 38.9
Aa31LG3G18440 Aethionema arabicum HOM05D000003 ORTHO05D000004 1.7e-11 72.8 99 37.4
BcaC01g04093 Brassica carinata HOM05D000003 ORTHO05D000006 2.2e-11 72.4 96 35.4
BcaC01g04220 Brassica carinata HOM05D000003 ORTHO05D000004 2.8e-11 72.0 96 36.5
Aa31LG2G18920 Aethionema arabicum HOM05D000003 ORTHO05D000004 8.3e-11 70.5 96 38.5
Aa31LG6G3790 Aethionema arabicum HOM05D000003 ORTHO05D000006 8.3e-11 70.5 92 31.5
Aa31LG6G7750 Aethionema arabicum HOM05D000003 ORTHO05D000004 8.3e-11 70.5 92 31.5
Aa31sc808G10 Aethionema arabicum HOM05D000003 ORTHO05D000004 8.3e-11 70.5 96 39.6
Aa31LG8G12510 Aethionema arabicum HOM05D000003 ORTHO05D000004 1.4e-10 69.7 98 36.7
Aa31sc270G10 Aethionema arabicum HOM05D000003 ORTHO05D000004 1.8e-10 69.3 92 34.8
BcaB06g27718 Brassica carinata HOM05D000003 ORTHO05D001498 1.8e-10 69.3 96 37.5
Aa31LG5G21260 Aethionema arabicum HOM05D000003 ORTHO05D000004 2.4e-10 68.9 96 31.2
Aa31LG7G2740 Aethionema arabicum HOM05D000003 ORTHO05D000004 2.4e-10 68.9 96 36.5
Aa31sc588G30 Aethionema arabicum HOM05D000003 ORTHO05D000004 2.4e-10 68.9 96 35.4
Aa31sc914G40 Aethionema arabicum HOM05D000003 ORTHO05D000004 3.1e-10 68.6 96 35.4
Aa31LG4G10800 Aethionema arabicum HOM05D000003 ORTHO05D000004 4.1e-10 68.2 97 35.1
BcaB01g01579 Brassica carinata HOM05D000003 ORTHO05D001498 4.1e-10 68.2 79 46.8
Aa31sc34G50 Aethionema arabicum HOM05D000003 ORTHO05D000006 7.0e-10 67.4 91 37.4
BcaB05g22054 Brassica carinata HOM05D000003 ORTHO05D001498 9.1e-10 67.0 96 37.5
Aa31LG3G5460 Aethionema arabicum HOM05D000003 ORTHO05D000004 1.6e-09 66.2 95 32.6
Aa31sc128G60 Aethionema arabicum HOM05D000003 ORTHO05D000004 1.6e-09 66.2 98 33.7
Aa31sc248G40 Aethionema arabicum HOM05D000003 ORTHO05D000004 1.6e-09 66.2 98 33.7
Aa31LG2G14760 Aethionema arabicum HOM05D000003 ORTHO05D000004 2.0e-09 65.9 98 36.7
Aa31LG7G5890 Aethionema arabicum HOM05D000003 ORTHO05D000004 2.0e-09 65.9 98 36.7
Aa31sc427G30 Aethionema arabicum HOM05D000003 ORTHO05D000006 2.7e-09 65.5 94 30.9
Aa31sc92G10 Aethionema arabicum HOM05D000003 ORTHO05D000004 3.5e-09 65.1 92 35.9
Aa31LG8G12060 Aethionema arabicum HOM05D000003 ORTHO05D000006 4.5e-09 64.7 96 34.4
Aa31LG7G10780 Aethionema arabicum HOM05D000003 ORTHO05D000004 5.9e-09 64.3 99 33.3
BolC4t23478H Brassica oleracea HOM05D000003 ORTHO05D000006 5.9e-09 64.3 77 44.2
Aa31sc688G40 Aethionema arabicum HOM05D000003 ORTHO05D000004 7.7e-09 63.9 99 35.4
BcaB02g10751 Brassica carinata HOM05D000003 ORTHO05D000006 7.7e-09 63.9 96 33.3
Aa31LG4G12660 Aethionema arabicum HOM05D000003 ORTHO05D000004 1.3e-08 63.2 96 33.3
Aa31LG9G3670 Aethionema arabicum HOM05D000003 ORTHO05D000004 1.3e-08 63.2 94 33.0
BcaB07g33945 Brassica carinata HOM05D000496 ORTHO05D000411 1.7e-08 62.8 94 36.2
Rhsim02G0038900 Rhododendron simsii HOM05D000003 ORTHO05D000126 1.7e-08 62.8 97 35.1
BcaC06g36207 Brassica carinata HOM05D000003 ORTHO05D015459 2.2e-08 62.4 96 32.3
C09p41870 Brassica napus HOM05D000003 ORTHO05D027234 2.9e-08 62.0 86 33.7
Aa31LG1G6010 Aethionema arabicum HOM05D000003 ORTHO05D016452 3.8e-08 61.6 77 35.1
BolC7t41849H Brassica oleracea HOM05D000003 ORTHO05D000006 5.0e-08 61.2 97 28.9
BcaB03g13651 Brassica carinata HOM05D000003 ORTHO05D021670 6.5e-08 60.8 96 32.3
Rhsim01G0112200 Rhododendron simsii HOM05D000003 ORTHO05D000126 6.5e-08 60.8 97 32.0
Aa31LG6G10540 Aethionema arabicum HOM05D000003 ORTHO05D000004 8.5e-08 60.5 92 33.7
Aa31sc174G20 Aethionema arabicum HOM05D000003 ORTHO05D000004 8.5e-08 60.5 96 35.4
BcaC02g12838 Brassica carinata HOM05D000003 ORTHO05D001498 8.5e-08 60.5 95 37.9
BraA01t02705Z Brassica rapa HOM05D011471 ORTHO05D014744 8.5e-08 60.5 100 33.0
BraA03t15362Z Brassica rapa HOM05D000003 ORTHO05D027234 8.5e-08 60.5 84 39.3
Aa31LG11G9550 Aethionema arabicum HOM05D000003 ORTHO05D000004 1.1e-07 60.1 96 31.2
Aa31sc256G10 Aethionema arabicum HOM05D000003 ORTHO05D000004 1.1e-07 60.1 97 34.0
Aa31LG11G6920 Aethionema arabicum HOM05D000003 ORTHO05D000004 1.5e-07 59.7 78 37.2
Aa31LG3G4870 Aethionema arabicum HOM05D000003 ORTHO05D016452 1.5e-07 59.7 83 30.1
BcaB05g21700 Brassica carinata HOM05D000496 ORTHO05D000411 1.5e-07 59.7 86 32.6
BcaC07g37007 Brassica carinata HOM05D000496 ORTHO05D021670 1.5e-07 59.7 96 32.3
Aa31LG2G16390 Aethionema arabicum HOM05D000003 ORTHO05D000004 1.9e-07 59.3 97 33.0
Aa31sc52G80 Aethionema arabicum HOM05D000003 ORTHO05D000004 1.9e-07 59.3 96 35.4
Aa31sc85G60 Aethionema arabicum HOM05D000003 ORTHO05D000004 2.5e-07 58.9 97 34.0
Aa31sc914G60 Aethionema arabicum HOM05D000496 ORTHO05D000411 2.5e-07 58.9 94 33.0
Sp6g13220 Schrenkiella parvula HOM05D000003 ORTHO05D000006 2.5e-07 58.9 96 32.3
BolC2t10028H Brassica oleracea HOM05D000003 ORTHO05D000006 3.2e-07 58.5 96 26.0
Aa31LG11G5340 Aethionema arabicum HOM05D000003 ORTHO05D000004 4.2e-07 58.2 78 37.2
Aa31sc31G40 Aethionema arabicum HOM05D000003 ORTHO05D000411 4.2e-07 58.2 75 36.0
BolC7t41786H Brassica oleracea HOM05D000003 ORTHO05D011507 4.2e-07 58.2 68 45.6
Aa31LG3G5010 Aethionema arabicum HOM05D000003 ORTHO05D000004 5.5e-07 57.8 94 29.8
Aa31LG3G5530 Aethionema arabicum HOM05D000003 ORTHO05D000006 5.5e-07 57.8 96 33.3
Aa31sc734G10 Aethionema arabicum HOM05D000003 ORTHO05D000004 5.5e-07 57.8 96 31.2
BcaB02g10743 Brassica carinata HOM05D010185 ORTHO05D000006 5.5e-07 57.8 78 38.5
BcaC05g25993 Brassica carinata HOM05D000003 ORTHO05D000006 5.5e-07 57.8 72 37.5
Aa31LG2G18130 Aethionema arabicum HOM05D000003 ORTHO05D000004 7.2e-07 57.4 80 40.0
Aa31sc25G140 Aethionema arabicum HOM05D000003 ORTHO05D000006 9.4e-07 57.0 80 35.0
Aa31sc773G10 Aethionema arabicum HOM05D000003 ORTHO05D000004 9.4e-07 57.0 100 30.0
Aa31LG5G23530 Aethionema arabicum HOM05D000003 ORTHO05D000006 1.2e-06 56.6 78 37.2
Aa31LG10G9400 Aethionema arabicum HOM05D000003 ORTHO05D000004 1.6e-06 56.2 75 34.7
Aa31LG4G8300 Aethionema arabicum HOM05D000003 ORTHO05D000004 1.6e-06 56.2 100 32.0
Aa31LG5G23430 Aethionema arabicum HOM05D000003 ORTHO05D000004 1.6e-06 56.2 96 35.4
BcaB04g17684 Brassica carinata HOM05D000003 ORTHO05D021670 1.6e-06 56.2 96 32.3
SHI34887 Sapria himalayana HOM05D000024 ORTHO05D000006 1.6e-06 56.2 103 29.1
Aa31LG11G11010 Aethionema arabicum HOM05D000003 ORTHO05D000004 2.1e-06 55.8 93 38.7
Aa31LG9G15190 Aethionema arabicum HOM05D000003 ORTHO05D000004 2.1e-06 55.8 97 33.0
BcaB08g34848 Brassica carinata HOM05D000496 ORTHO05D000411 2.1e-06 55.8 79 36.7
BcaC02g09343 Brassica carinata HOM05D000003 ORTHO05D021670 2.1e-06 55.8 96 28.1
BolC4t24965H Brassica oleracea HOM05D000003 ORTHO05D018675 2.1e-06 55.8 95 25.3
Aa31sc360G50 Aethionema arabicum HOM05D000003 ORTHO05D000004 2.7e-06 55.5 97 32.0
Aa31sc377G50 Aethionema arabicum HOM05D000003 ORTHO05D000006 2.7e-06 55.5 87 31.0
BraA02t07552Z Brassica rapa HOM05D000003 ORTHO05D011507 2.7e-06 55.5 98 33.7
MD08G1205700 Malus domestica HOM05D000003 ORTHO05D000004 2.7e-06 55.5 97 28.9
Rhsim11G0146500 Rhododendron simsii HOM05D000003 ORTHO05D000004 2.7e-06 55.5 98 33.7
BcaC06g36164 Brassica carinata HOM05D000496 ORTHO05D000411 3.6e-06 55.1 96 32.3
BcaC08g46847 Brassica carinata HOM05D000496 ORTHO05D000411 3.6e-06 55.1 96 31.2
Rhsim02G0103500 Rhododendron simsii HOM05D000003 ORTHO05D000006 3.6e-06 55.1 98 30.6
Aa31LG3G5250 Aethionema arabicum HOM05D000003 ORTHO05D000004 4.7e-06 54.7 96 27.1
Aa31sc60G60 Aethionema arabicum HOM05D000003 ORTHO05D000004 4.7e-06 54.7 78 34.6
BcaC08g43076 Brassica carinata HOM05D016295 ORTHO05D017554 4.7e-06 54.7 83 32.5
SHI24053 Sapria himalayana HOM05D000024 ORTHO05D000006 4.7e-06 54.7 103 30.1
Aa31LG3G6430 Aethionema arabicum HOM05D000003 ORTHO05D000006 6.1e-06 54.3 97 32.0
Aa31sc149G40 Aethionema arabicum HOM05D000003 ORTHO05D000006 6.1e-06 54.3 78 33.3
BcaC04g23888 Brassica carinata HOM05D011474 ORTHO05D027115 6.1e-06 54.3 96 30.2
BcaC08g42860 Brassica carinata HOM05D011474 ORTHO05D027115 6.1e-06 54.3 96 30.2
BcaNung03655 Brassica carinata HOM05D000003 ORTHO05D024149 6.1e-06 54.3 65 40.0
BolC2t08002H Brassica oleracea HOM05D000003 ORTHO05D024303 6.1e-06 54.3 58 48.3
BolC5t29612H Brassica oleracea HOM05D000003 ORTHO05D000006 6.1e-06 54.3 96 26.0
Aa31LG3G6650 Aethionema arabicum HOM05D000003 ORTHO05D000004 8.0e-06 53.9 97 30.9
BcaC09g48310 Brassica carinata HOM05D000003 ORTHO05D000006 8.0e-06 53.9 76 35.5
Rhsim09G0106200 Rhododendron simsii HOM05D000003 ORTHO05D000126 8.0e-06 53.9 96 32.3
Rhsim13G0210000 Rhododendron simsii HOM05D000003 ORTHO05D000004 8.0e-06 53.9 96 32.3


User provided reference genes

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