Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C02p15790 Brassica napus HOM05D003561 ORTHO05D004351 5.8e-150 534.3 283 100.0
BolC2t11906H Brassica oleracea HOM05D003561 ORTHO05D004351 1.2e-139 500.0 284 94.4
BolC3t20255H Brassica oleracea HOM05D003561 ORTHO05D004351 3.1e-135 485.3 284 93.0
BolC9t55360H Brassica oleracea HOM05D003561 ORTHO05D004351 1.3e-120 436.8 250 95.2
C01p04490 Brassica napus HOM05D003561 ORTHO05D004351 4.6e-78 295.4 160 91.9
BolC1t00435H Brassica oleracea HOM05D003561 ORTHO05D004351 4.6e-78 295.4 160 91.9
BcaNung04160 Brassica carinata HOM05D003561 ORTHO05D004351 1.3e-77 293.9 160 89.4
BraA01t00401Z Brassica rapa HOM05D003561 ORTHO05D004351 1.3e-77 293.9 160 91.2
BcaNung04991 Brassica carinata HOM05D003561 ORTHO05D004351 1.7e-77 293.5 160 91.2
A01p04120 Brassica napus HOM05D003561 ORTHO05D004351 3.9e-77 292.4 160 91.2
BcaC03g17819 Brassica carinata HOM05D003561 ORTHO05D004351 4.3e-76 288.9 250 72.0
C09p44740 Brassica napus HOM05D003561 ORTHO05D004351 2.6e-73 279.6 155 91.0
C02p58430 Brassica napus HOM05D003561 ORTHO05D004351 6.6e-69 265.0 250 68.0
Sp7g32080 Schrenkiella parvula HOM05D003561 ORTHO05D004351 3.3e-68 262.7 160 81.2
AL7G16990 Arabidopsis lyrata HOM05D003561 ORTHO05D004351 3.4e-65 252.7 160 76.2
Thhalv10024491m.g Eutrema salsugineum HOM05D003561 ORTHO05D004351 1.3e-64 250.8 161 77.0
Carub.0007s0608 Capsella rubella HOM05D003561 ORTHO05D004351 4.1e-63 245.7 160 73.8
AT4G34280 Arabidopsis thaliana HOM05D003561 ORTHO05D004351 2.7e-62 243.0 160 73.8
Aa31sc72G40 Aethionema arabicum HOM05D003561 ORTHO05D004351 8.6e-61 238.0 160 72.5
CARHR242490 Cardamine hirsuta HOM05D003561 ORTHO05D004351 2.2e-56 223.4 160 70.0
THA.LOC104819541 Tarenaya hassleriana HOM05D003561 ORTHO05D004351 1.0e-53 214.5 155 65.8
C09p50480 Brassica napus HOM05D003561 ORTHO05D004351 3.8e-48 196.1 95 97.9
Gohir.A03G184800 Gossypium hirsutum HOM05D003561 ORTHO05D004351 6.9e-42 175.3 157 58.0
Gorai.005G233700 Gossypium raimondii HOM05D003561 ORTHO05D004351 6.9e-42 175.3 157 58.0
Atru.chr5.2428 Acer truncatum HOM05D003561 ORTHO05D004351 9.0e-42 174.9 157 56.7
Ciclev10027851m.g Citrus clementina HOM05D003561 ORTHO05D004351 4.5e-41 172.6 158 55.7
Gohir.D02G206300 Gossypium hirsutum HOM05D003561 ORTHO05D004351 5.8e-41 172.2 157 57.3
C09p24450 Brassica napus HOM05D003561 ORTHO05D004351 2.2e-40 170.2 200 61.5
Haze_10212 Corylus avellana HOM05D003561 ORTHO05D004351 2.9e-40 169.9 158 55.1
Cfa004615 Carpinus fangiana HOM05D003561 ORTHO05D004351 6.4e-40 168.7 158 55.1
GSVIVG01037885001 Vitis vinifera HOM05D003561 ORTHO05D004351 1.4e-39 167.5 160 54.4
COL.COLO4_32560 Corchorus olitorius HOM05D003561 ORTHO05D004351 7.1e-39 165.2 157 54.8
Duzib132G1062 Durio zibethinus HOM05D003561 ORTHO05D004351 7.1e-39 165.2 157 55.4
Thecc.02G112400 Theobroma cacao HOM05D003561 ORTHO05D004351 2.7e-38 163.3 157 54.8
Medtr1g106905 Medicago truncatula HOM05D003561 ORTHO05D004351 3.5e-38 162.9 157 52.2
Lalb_Chr02g0145171 Lupinus albus HOM05D003561 ORTHO05D004351 4.6e-38 162.5 182 47.3
Lj5A216G104 Lonicera japonica HOM05D003561 ORTHO05D004351 6.0e-38 162.2 150 56.0
RcHm_v2.0_Chr6g0254331 Rosa chinensis HOM05D003561 ORTHO05D004351 6.0e-38 162.2 157 52.9
Dinv15779 Davidia involucrata HOM05D003561 ORTHO05D004351 7.9e-38 161.8 156 53.2
MD05G1093800 Malus domestica HOM05D003561 ORTHO05D004351 7.9e-38 161.8 156 52.6
arahy.Tifrunner.gnm1.ann1.Q24X8K Arachis hypogaea HOM05D003561 ORTHO05D004351 1.0e-37 161.4 171 48.0
arahy.Tifrunner.gnm1.ann1.IMHW03 Arachis hypogaea HOM05D003561 ORTHO05D004351 1.8e-37 160.6 171 48.0
Aqoxy6G02799 Aquilegia oxysepala HOM05D003561 ORTHO05D004351 3.9e-37 159.5 194 47.4
QL11p032306 Quercus lobata HOM05D003561 ORTHO05D004351 6.7e-37 158.7 171 49.7
Ca_11052_v3 Cicer arietinum L. HOM05D003561 ORTHO05D004351 1.1e-36 157.9 158 51.3
CSS0023905 Camellia sinensis var. sinensis HOM05D003561 ORTHO05D004351 1.9e-36 157.1 157 52.2
CSS0037584 Camellia sinensis var. sinensis HOM05D003561 ORTHO05D004351 1.9e-36 157.1 157 52.2
Potri.001G297600 Populus trichocarpa HOM05D003561 ORTHO05D004351 1.9e-36 157.1 170 49.4
Actinidia27978 Actinidia chinensis HOM05D003561 ORTHO05D004351 2.5e-36 156.8 157 50.3
vmacro19460 Vaccinium macrocarpon HOM05D003561 ORTHO05D004351 2.5e-36 156.8 157 49.7
Lj5g0023418 Lotus japonicus HOM05D003561 ORTHO05D004351 3.3e-36 156.4 158 51.3
CiPaw.05G014100 Carya illinoinensis HOM05D003561 ORTHO05D004351 5.6e-36 155.6 148 54.7
TAR381G0090 Trochodendron aralioides HOM05D003561 ORTHO05D004351 5.6e-36 155.6 171 50.9
Psat6g216560 Pisum sativum HOM05D003561 ORTHO05D004351 7.4e-36 155.2 158 50.6
Rhsim05G0089400 Rhododendron simsii HOM05D003561 ORTHO05D004351 7.4e-36 155.2 157 49.7
Rhsim10G0161700 Rhododendron simsii HOM05D003561 ORTHO05D004351 7.4e-36 155.2 157 49.7
Sabra09G0071200 Salix brachista HOM05D003561 ORTHO05D004351 7.4e-36 155.2 171 49.1
FAN24G1860 Fragaria x ananassa HOM05D003561 ORTHO05D004351 9.6e-36 154.8 157 51.6
TWI75G1561 Tripterygium wilfordii HOM05D003561 ORTHO05D004351 2.1e-35 153.7 157 52.9
HanXRQChr04g0128551 Helianthus annuus HOM05D003561 ORTHO05D004351 2.8e-35 153.3 171 45.6
FvH4_2g04670 Fragaria vesca HOM05D003561 ORTHO05D004351 3.7e-35 152.9 157 51.0
FAN15G0682 Fragaria x ananassa HOM05D003561 ORTHO05D004351 4.8e-35 152.5 157 50.3
TPR.G27110 Trifolium pratense HOM05D003561 ORTHO05D004351 4.8e-35 152.5 157 49.0
Nn5g30480 Nelumbo nucifera HOM05D003561 ORTHO05D004351 1.1e-34 151.4 156 51.9
ECA236G4994 Erigeron canadensis HOM05D003561 ORTHO05D004351 1.4e-34 151.0 157 50.3
Oeu011151.1 Olea europaea HOM05D003561 ORTHO05D004351 1.4e-34 151.0 157 51.6
Potri.009G092500 Populus trichocarpa HOM05D003561 ORTHO05D004351 1.4e-34 151.0 169 49.1
Phvul.007G042500 Phaseolus vulgaris HOM05D003561 ORTHO05D004351 2.4e-34 150.2 158 51.3
Manes.10G073266 Manihot esculenta HOM05D003561 ORTHO05D004351 6.9e-34 148.7 157 51.0
Rhsim10G0161500 Rhododendron simsii HOM05D003561 ORTHO05D004351 9.0e-34 148.3 157 47.8
MSTRG.16699 Avicennia marina HOM05D003561 ORTHO05D004351 1.2e-33 147.9 164 48.8
DCAR_001664 Daucus carota HOM05D003561 ORTHO05D004351 1.2e-33 147.9 157 50.3
PGSC0003DMG400025758 Solanum tuberosum HOM05D003561 ORTHO05D004351 1.2e-33 147.9 150 50.0
Cc02_g19520 Coffea canephora HOM05D003561 ORTHO05D004351 1.5e-33 147.5 158 51.3
Migut.B00411 Erythranthe guttata HOM05D003561 ORTHO05D004351 1.5e-33 147.5 157 49.7
FAN27G2112 Fragaria x ananassa HOM05D003561 ORTHO05D004351 1.5e-33 147.5 157 49.7
Nitab4.5_0001480g0050 Nicotiana tabacum HOM05D003561 ORTHO05D004351 1.5e-33 147.5 150 50.0
PGR042G0884 Punica granatum HOM05D003561 ORTHO05D004351 2.0e-33 147.1 154 53.2
Dinv30056 Davidia involucrata HOM05D003561 ORTHO05D004351 2.6e-33 146.7 156 44.9
Solyc01g107360.4 Solanum lycopersicum HOM05D003561 ORTHO05D004351 2.6e-33 146.7 150 50.0
Sopen01g049600 Solanum pennellii HOM05D003561 ORTHO05D004351 2.6e-33 146.7 150 50.0
Nitab4.5_0010275g0030 Nicotiana tabacum HOM05D003561 ORTHO05D004351 3.4e-33 146.4 150 50.7
Peaxi162Scf00016g02531 Petunia axillaris HOM05D003561 ORTHO05D004351 4.5e-33 146.0 150 50.7
Glyma.20G131200 Glycine max HOM05D003561 ORTHO05D004351 1.3e-32 144.4 158 50.0
Lsat_1_v5_gn_7_85901 Lactuca sativa HOM05D003561 ORTHO05D004351 1.7e-32 144.1 171 45.6
Eucgr.G01293 Eucalyptus grandis HOM05D003561 ORTHO05D004351 4.9e-32 142.5 165 47.9
PSO675G3219 Papaver somniferum HOM05D003561 ORTHO05D004351 6.4e-32 142.1 157 49.0
Prupe.8G138700 Prunus persica HOM05D003561 ORTHO05D004351 1.4e-31 141.0 119 56.3
VMungo0720G2973 Vigna mungo HOM05D003561 ORTHO05D004351 1.4e-31 141.0 158 48.7
Manes.13G115200 Manihot esculenta HOM05D003561 ORTHO05D004351 1.9e-31 140.6 158 44.9
GSVIVG01000167001 Vitis vinifera HOM05D003561 ORTHO05D004351 2.4e-31 140.2 155 48.4
PSO541G3211 Papaver somniferum HOM05D003561 ORTHO05D004351 4.2e-31 139.4 157 48.4
SGA_v2.0_scaffold225G43001 Striga asiatica HOM05D003561 ORTHO05D004351 6.0e-30 135.6 175 45.1
Hma1.2p1_0239F.1_g099850 Hydrangea macrophylla HOM05D003561 ORTHO05D004351 1.0e-29 134.8 157 47.1
Atru.chr3.214 Acer truncatum HOM05D003561 ORTHO05D004351 3.9e-29 132.9 160 45.0
Atru.chr3.226 Acer truncatum HOM05D003561 ORTHO05D004351 3.9e-29 132.9 160 45.0
Haze_15327 Corylus avellana HOM05D003561 ORTHO05D004351 6.7e-29 132.1 158 46.8
RcHm_v2.0_Chr6g0254281 Rosa chinensis HOM05D003561 ORTHO05D004351 1.1e-28 131.3 132 52.3
Cfa004087 Carpinus fangiana HOM05D003561 ORTHO05D004351 1.9e-28 130.6 158 46.2
PGR102G2010 Punica granatum HOM05D003561 ORTHO05D004351 1.9e-28 130.6 160 45.0
Duzib147G0573 Durio zibethinus HOM05D003561 ORTHO05D004351 9.6e-28 128.3 160 45.0
Potri.007G051500 Populus trichocarpa HOM05D003561 ORTHO05D004351 9.6e-28 128.3 157 41.4
SalBow6G5634 Salvia bowleyana HOM05D003561 ORTHO05D004351 9.6e-28 128.3 202 37.1
CSS0044154 Camellia sinensis var. sinensis HOM05D003561 ORTHO05D004351 2.1e-27 127.1 160 45.0
Hund06710 Selenicereus undatus HOM05D003561 ORTHO05D004351 2.8e-27 126.7 156 46.8
AUR62027366 Chenopodium quinoa HOM05D003561 ORTHO05D004351 3.7e-27 126.3 156 46.2
Ah.09g232050 Amaranthus hybridus HOM05D003561 ORTHO05D004351 6.2e-27 125.6 169 45.0
RcHm_v2.0_Chr6g0254361 Rosa chinensis HOM05D003561 ORTHO05D004351 6.2e-27 125.6 126 51.6
Thecc.01G067200 Theobroma cacao HOM05D003561 ORTHO05D004351 1.1e-26 124.8 160 44.4
Gorai.003G028400 Gossypium raimondii HOM05D003561 ORTHO05D004351 1.4e-26 124.4 163 41.7
ECA238G3157 Erigeron canadensis HOM05D003561 ORTHO05D004351 3.1e-26 123.2 156 43.6
COL.COLO4_11519 Corchorus olitorius HOM05D003561 ORTHO05D004351 4.0e-26 122.9 159 43.4
Gohir.D03G026700 Gossypium hirsutum HOM05D003561 ORTHO05D004351 4.0e-26 122.9 163 41.7
CANSAT01G2799 Cannabis sativa HOM05D003561 ORTHO05D004351 5.3e-26 122.5 162 39.5
SEGI_28319 Sequoiadendron giganteum HOM05D003561 ORTHO05D004351 5.3e-26 122.5 157 43.3
SEGI_36307 Sequoiadendron giganteum HOM05D003561 ORTHO05D004351 5.3e-26 122.5 157 43.3
CiPaw.01G008500 Carya illinoinensis HOM05D003561 ORTHO05D004351 6.9e-26 122.1 157 43.9
Ciclev10024935m.g Citrus clementina HOM05D003561 ORTHO05D004351 1.2e-25 121.3 157 38.9
DCAR_010841 Daucus carota HOM05D003561 ORTHO05D004351 3.4e-25 119.8 156 44.2
Actinidia12002 Actinidia chinensis HOM05D003561 ORTHO05D004351 4.5e-25 119.4 155 42.6
Cpa.g.sc6.61 Carica papaya HOM05D003561 ORTHO05D004351 4.5e-25 119.4 158 42.4
CAN.G1482.2 Capsicum annuum HOM05D003561 ORTHO05D004351 1.3e-24 117.9 158 42.4
Gohir.A02G153700 Gossypium hirsutum HOM05D003561 ORTHO05D004351 2.9e-24 116.7 163 40.5
Lj7C86G5 Lonicera japonica HOM05D003561 ORTHO05D004351 2.9e-24 116.7 157 41.4
Nitab4.5_0000604g0020 Nicotiana tabacum HOM05D003561 ORTHO05D004351 2.9e-24 116.7 156 40.4
Hund29372 Selenicereus undatus HOM05D003561 ORTHO05D004351 2.9e-24 116.7 157 42.7
HanXRQChr14g0449611 Helianthus annuus HOM05D003561 ORTHO05D004351 3.8e-24 116.3 158 42.4
Hund29375 Selenicereus undatus HOM05D003561 ORTHO05D004351 3.8e-24 116.3 157 42.7
Nitab4.5_0000284g0010 Nicotiana tabacum HOM05D003561 ORTHO05D004351 8.4e-24 115.2 156 40.4
Sopen02g014910 Solanum pennellii HOM05D003561 ORTHO05D004351 8.4e-24 115.2 158 41.1
Lsat_1_v5_gn_2_83541 Lactuca sativa HOM05D003561 ORTHO05D004351 1.4e-23 114.4 132 45.5
AUR62003959 Chenopodium quinoa HOM05D003561 ORTHO05D004351 1.9e-23 114.0 194 38.1
EL10Ac6g15669 Beta vulgaris HOM05D003561 ORTHO05D004351 2.5e-23 113.6 194 37.1
Rhsim10G0104800 Rhododendron simsii HOM05D003561 ORTHO05D004351 3.2e-23 113.2 155 43.2
PGSC0003DMG400013016 Solanum tuberosum HOM05D003561 ORTHO05D004351 5.5e-23 112.5 158 39.2
AUR62038271 Chenopodium quinoa HOM05D003561 ORTHO05D004351 9.3e-23 111.7 157 41.4
Solyc02g064800.3 Solanum lycopersicum HOM05D003561 ORTHO05D004351 9.3e-23 111.7 158 41.1
Prupe.6G225400 Prunus persica HOM05D003561 ORTHO05D004351 4.6e-22 109.4 157 38.2
Eucgr.H02268 Eucalyptus grandis HOM05D003561 ORTHO05D004351 7.9e-22 108.6 157 40.8
Ah.03g146260 Amaranthus hybridus HOM05D003561 ORTHO05D004351 1.0e-21 108.2 195 37.9
Hund13924 Selenicereus undatus HOM05D003561 ORTHO05D004351 1.3e-21 107.8 158 41.1
RcHm_v2.0_Chr2g0107231 Rosa chinensis HOM05D003561 ORTHO05D004351 1.8e-21 107.5 157 38.9
FAN28G0575 Fragaria x ananassa HOM05D003561 ORTHO05D004351 6.7e-21 105.5 155 38.7
FvH4_1g17060 Fragaria vesca HOM05D003561 ORTHO05D004351 8.7e-21 105.1 155 38.7
MD02G1180800 Malus domestica HOM05D003561 ORTHO05D004351 8.7e-21 105.1 157 38.9
FAN19G0232 Fragaria x ananassa HOM05D003561 ORTHO05D004351 1.1e-20 104.8 155 38.7
FAN26G2049 Fragaria x ananassa HOM05D003561 ORTHO05D004351 1.1e-20 104.8 155 38.7
Peaxi162Scf00449g00016 Petunia axillaris HOM05D003561 ORTHO05D004351 2.8e-19 100.1 97 52.6
Pp3c22_17660 Physcomitrium patens HOM05D003561 ORTHO05D004351 3.7e-19 99.8 156 39.7
Cc07_g06660 Coffea canephora HOM05D003561 ORTHO05D004351 1.4e-18 97.8 154 38.3
Pp3c18_4410 Physcomitrium patens HOM05D003561 ORTHO05D004351 1.4e-18 97.8 183 34.4
FAN20G0240 Fragaria x ananassa HOM05D003561 ORTHO05D004351 3.1e-18 96.7 172 37.8
Cpa.g.sc292.9 Carica papaya HOM05D003561 ORTHO05D004351 1.7e-16 90.9 79 60.8
vmacro05379 Vaccinium macrocarpon HOM05D003561 ORTHO05D004351 5.0e-16 89.4 107 47.7
Glyma.10G259600 Glycine max HOM05D003561 ORTHO05D004351 8.5e-16 88.6 171 36.8
AagrBONN_evm.TU.Sc2ySwM_340.381 Anthoceros agrestis HOM05D003561 ORTHO05D004351 2.7e-14 83.6 160 35.6
Oeu003572.1 Olea europaea HOM05D003561 ORTHO05D004351 4.3e-12 76.3 151 35.8
SMO145G0124 Selaginella moellendorffii HOM05D003561 ORTHO05D004351 1.3e-11 74.7 90 47.8
AagrBONN_evm.TU.Sc2ySwM_111.1 Anthoceros agrestis HOM05D003561 ORTHO05D004351 3.7e-11 73.2 96 43.8
AUR62031283 Chenopodium quinoa HOM05D003561 ORTHO05D004351 1.1e-10 71.6 67 59.7


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