Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C02p15580 Brassica napus HOM05D009356 ORTHO05D010353 2.4e-262 908.3 451 100.0
C04p15140 Brassica napus HOM05D009356 ORTHO05D010353 3.1e-238 828.2 451 89.1
C07p06990 Brassica napus HOM05D009356 ORTHO05D010353 6.1e-218 760.8 451 86.5
BcaC02g10021 Brassica carinata HOM05D009356 ORTHO05D010353 1.6e-194 682.9 391 89.5
BcaC05g26363 Brassica carinata HOM05D009356 ORTHO05D010353 1.0e-172 610.5 391 81.8
C02p25050 Brassica napus HOM05D009356 ORTHO05D010353 8.4e-167 590.9 310 94.5
BcaC03g14879 Brassica carinata HOM05D009356 ORTHO05D010353 3.4e-160 568.9 392 73.2
BcaC04g22051 Brassica carinata HOM05D009356 ORTHO05D010353 4.9e-151 538.5 391 74.4
BcaC05g28711 Brassica carinata HOM05D009356 ORTHO05D010353 1.8e-124 450.3 411 60.1
C07p25740 Brassica napus HOM05D009356 ORTHO05D010353 7.2e-94 348.6 193 88.6
BcaC02g11800 Brassica carinata HOM05D009356 ORTHO05D010353 8.3e-82 308.5 194 85.6
BcaC02g11799 Brassica carinata HOM05D009356 ORTHO05D010353 4.3e-78 296.2 151 93.4
Sp6g09590 Schrenkiella parvula HOM05D009356 ORTHO05D010353 1.2e-56 224.9 391 34.5
BcaB08g35697 Brassica carinata HOM05D009356 ORTHO05D010353 5.8e-43 179.5 220 37.7
BcaC05g27052 Brassica carinata HOM05D009356 ORTHO05D010353 3.9e-39 166.8 358 28.2
BcaB04g17676 Brassica carinata HOM05D009356 ORTHO05D010353 5.4e-33 146.4 222 30.6
Sp1g28960 Schrenkiella parvula HOM05D009356 ORTHO05D010353 8.1e-29 132.5 353 29.2
C01p49280 Brassica napus HOM05D009244 ORTHO05D010353 4.0e-28 130.2 67 91.0
C07p06480 Brassica napus HOM05D009244 ORTHO05D010353 4.0e-28 130.2 67 91.0
C07p45910 Brassica napus HOM05D009244 ORTHO05D010353 4.0e-28 130.2 67 91.0
C09p53630 Brassica napus HOM05D009244 ORTHO05D010353 4.0e-28 130.2 67 91.0
BolC1t04887H Brassica oleracea HOM05D009244 ORTHO05D010353 4.0e-28 130.2 67 91.0
BolC5t31134H Brassica oleracea HOM05D009244 ORTHO05D010353 4.0e-28 130.2 67 91.0
BolC7t45111H Brassica oleracea HOM05D009244 ORTHO05D010353 4.0e-28 130.2 67 91.0
BolC9t55327H Brassica oleracea HOM05D009244 ORTHO05D010353 4.0e-28 130.2 67 91.0
C03p53340 Brassica napus HOM05D009244 ORTHO05D010353 5.3e-28 129.8 67 91.0
C07p27320 Brassica napus HOM05D009244 ORTHO05D010353 5.3e-28 129.8 67 91.0
A01p25780 Brassica napus HOM05D009244 ORTHO05D010353 9.0e-28 129.0 68 88.2
C09p16900 Brassica napus HOM05D009244 ORTHO05D010353 9.0e-28 129.0 67 89.6
BolC1t02265H Brassica oleracea HOM05D009244 ORTHO05D010353 2.0e-27 127.9 67 89.6
BcaB08g35272 Brassica carinata HOM05D009356 ORTHO05D010353 3.4e-27 127.1 172 34.9
C04p33870 Brassica napus HOM05D009244 ORTHO05D010353 3.4e-27 127.1 67 89.6
C04p35530 Brassica napus HOM05D009244 ORTHO05D010353 3.4e-27 127.1 67 89.6
BolC3t20179H Brassica oleracea HOM05D009244 ORTHO05D010353 3.4e-27 127.1 67 89.6
BolC4t24953H Brassica oleracea HOM05D009244 ORTHO05D010353 3.4e-27 127.1 67 89.6
BolC4t25108H Brassica oleracea HOM05D009244 ORTHO05D010353 3.4e-27 127.1 67 89.6
C03p52910 Brassica napus HOM05D009244 ORTHO05D010353 5.8e-27 126.3 67 88.1
BolC8t48248H Brassica oleracea HOM05D009244 ORTHO05D010353 5.8e-27 126.3 67 88.1
C03p53580 Brassica napus HOM05D009244 ORTHO05D010353 7.6e-27 125.9 67 89.6
BolC3t17618H Brassica oleracea HOM05D009244 ORTHO05D010353 7.6e-27 125.9 67 89.6
C05p23960 Brassica napus HOM05D009244 ORTHO05D010353 1.3e-26 125.2 67 88.1
BolC2t10309H Brassica oleracea HOM05D009244 ORTHO05D010353 1.3e-26 125.2 67 86.6
BolC7t43094H Brassica oleracea HOM05D009244 ORTHO05D010353 1.3e-26 125.2 67 88.1
C03p84790 Brassica napus HOM05D009244 ORTHO05D010353 2.2e-26 124.4 57 100.0
C07p17260 Brassica napus HOM05D009244 ORTHO05D010353 2.2e-26 124.4 67 88.1
BolC3t20768H Brassica oleracea HOM05D009244 ORTHO05D010353 2.2e-26 124.4 57 100.0
BolC1t03995H Brassica oleracea HOM05D009244 ORTHO05D010353 3.8e-26 123.6 61 93.4
BraA08t32885Z Brassica rapa HOM05D009244 ORTHO05D010353 3.8e-26 123.6 68 85.3
BolC2t10137H Brassica oleracea HOM05D009244 ORTHO05D010353 6.5e-26 122.9 60 95.0
AL9U11180 Arabidopsis lyrata HOM05D003849 ORTHO05D002482 4.2e-25 120.2 318 26.4
AL126U10020 Arabidopsis lyrata HOM05D009356 ORTHO05D006373 1.2e-24 118.6 377 27.1
BolC1t01431H Brassica oleracea HOM05D009244 ORTHO05D010353 1.2e-24 118.6 66 86.4
AL2G19060 Arabidopsis lyrata HOM05D003849 ORTHO05D002482 2.7e-24 117.5 257 29.6
Sp3g26020 Schrenkiella parvula HOM05D009356 ORTHO05D011005 2.7e-24 117.5 391 24.8
C02p56370 Brassica napus HOM05D009244 ORTHO05D010353 3.5e-24 117.1 66 84.8
BolC2t11695H Brassica oleracea HOM05D009244 ORTHO05D010353 3.5e-24 117.1 66 84.8
AL3G34330 Arabidopsis lyrata HOM05D009356 ORTHO05D006373 1.3e-23 115.2 376 26.3
SpUn0005_0080 Schrenkiella parvula HOM05D007883 ORTHO05D010332 1.5e-22 111.7 239 31.8
Sp7g10380 Schrenkiella parvula HOM05D009356 ORTHO05D011005 2.8e-21 107.5 149 38.3
Sp2g06700 Schrenkiella parvula HOM05D009356 ORTHO05D010353 4.5e-19 100.1 131 36.6
Sp6g08840 Schrenkiella parvula HOM05D007883 ORTHO05D010332 8.4e-18 95.9 281 29.2
AL7G49440 Arabidopsis lyrata HOM05D003849 ORTHO05D002482 2.7e-16 90.9 318 24.2
SpUn0056_0010 Schrenkiella parvula HOM05D007883 ORTHO05D010332 4.6e-16 90.1 215 31.2
SpUn0075_0010 Schrenkiella parvula HOM05D007883 ORTHO05D010332 1.3e-15 88.6 208 31.7
Sp5g17470 Schrenkiella parvula HOM05D009356 ORTHO05D010353 5.1e-15 86.7 135 36.3
BcaB01g03497 Brassica carinata HOM05D000977 ORTHO05D010766 1.6e-13 81.6 313 24.3
Sp2g06710 Schrenkiella parvula HOM05D009356 ORTHO05D010353 8.2e-13 79.3 141 31.9
BcaC06g33320 Brassica carinata HOM05D009356 ORTHO05D010353 1.4e-12 78.6 130 43.1
AUR62044633 Chenopodium quinoa HOM05D008347 ORTHO05D006373 2.6e-11 74.3 260 25.4
TPR.G14519 Trifolium pratense HOM05D014681 ORTHO05D006373 5.0e-10 70.1 151 28.5
AUR62024387 Chenopodium quinoa HOM05D008347 ORTHO05D006373 8.5e-10 69.3 160 29.4
AUR62013905 Chenopodium quinoa HOM05D008347 ORTHO05D006373 1.4e-09 68.6 158 27.8
Sp3g27220 Schrenkiella parvula HOM05D007883 ORTHO05D010332 1.4e-09 68.6 112 33.9
EL10Ac3g07114 Beta vulgaris HOM05D009952 ORTHO05D011763 1.9e-09 68.2 233 26.6
EL10Ac7g17386 Beta vulgaris HOM05D009474 ORTHO05D006373 9.4e-09 65.9 158 26.6
AUR62022722 Chenopodium quinoa HOM05D008347 ORTHO05D006373 1.2e-08 65.5 158 27.2
THA.LOC104820475 Tarenaya hassleriana HOM05D008347 ORTHO05D006373 1.2e-08 65.5 152 25.7
Sp7g06380 Schrenkiella parvula HOM05D006786 ORTHO05D011005 2.1e-08 64.7 291 24.4
VMungo1299G0001 Vigna mungo HOM05D008347 ORTHO05D006373 2.7e-08 64.3 168 22.6
AL3G44170 Arabidopsis lyrata HOM05D024197 ORTHO05D006373 3.6e-08 63.9 242 25.6
EL10Ac3g05933 Beta vulgaris HOM05D009952 ORTHO05D011763 6.1e-08 63.2 169 27.8
Sp3g25040 Schrenkiella parvula HOM05D007883 ORTHO05D010332 1.0e-07 62.4 113 34.5
AUR62044448 Chenopodium quinoa HOM05D005322 ORTHO05D011763 1.8e-07 61.6 286 21.0
SpUn0459_0010 Schrenkiella parvula HOM05D007883 ORTHO05D010332 5.1e-07 60.1 154 26.6
Ah.11g040720 Amaranthus hybridus HOM05D009559 ORTHO05D006373 6.7e-07 59.7 171 25.1
AUR62034995 Chenopodium quinoa HOM05D000107 ORTHO05D011763 6.7e-07 59.7 288 21.9
Ah.02g119300 Amaranthus hybridus HOM05D009559 ORTHO05D006373 8.8e-07 59.3 245 21.2
Ah.10g025060 Amaranthus hybridus HOM05D020495 ORTHO05D017251 8.8e-07 59.3 162 24.1
Aa31LG4G12890 Aethionema arabicum HOM05D007652 ORTHO05D002482 1.1e-06 58.9 283 23.0
Aa31sc154G30 Aethionema arabicum HOM05D007652 ORTHO05D002482 1.1e-06 58.9 283 23.0
Aa31sc482G30 Aethionema arabicum HOM05D007652 ORTHO05D002482 1.1e-06 58.9 283 23.0
VMungo0251G1913 Vigna mungo HOM05D008347 ORTHO05D006373 1.1e-06 58.9 156 23.7
EL10Ac5g11398 Beta vulgaris HOM05D009952 ORTHO05D011763 1.5e-06 58.5 170 26.5
BcaB06g26813 Brassica carinata HOM05D012753 ORTHO05D010353 2.0e-06 58.2 205 23.4
SpUn0192_0010 Schrenkiella parvula HOM05D007883 ORTHO05D010332 4.3e-06 57.0 110 36.4
Sp5g19630 Schrenkiella parvula HOM05D007883 ORTHO05D010332 5.7e-06 56.6 144 33.3
BcaB02g11029 Brassica carinata HOM05D009356 ORTHO05D010353 9.7e-06 55.8 88 28.4
SpUn0032_0080 Schrenkiella parvula HOM05D007883 ORTHO05D010332 9.7e-06 55.8 109 38.5


User provided reference genes

Program Settings