Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C02p14940 Brassica napus HOM05D008316 ORTHO05D021631 7.5e-143 510.8 307 100.0
BcaC03g14204 Brassica carinata HOM05D008316 ORTHO05D021631 1.7e-54 217.2 176 97.7
BcaC02g09635 Brassica carinata HOM05D008316 ORTHO05D005130 6.1e-52 208.8 204 74.0
A08p06560 Brassica napus HOM05D008316 ORTHO05D021631 4.4e-50 202.6 150 87.3
BraA08t32671Z Brassica rapa HOM05D008316 ORTHO05D021631 4.4e-50 202.6 150 87.3
C01p42540 Brassica napus HOM05D008316 ORTHO05D021631 6.3e-49 198.7 175 86.9
BcaC06g34855 Brassica carinata HOM05D008316 ORTHO05D005130 4.1e-48 196.1 194 67.0
BcaC08g44739 Brassica carinata HOM05D008316 ORTHO05D005130 4.1e-48 196.1 239 70.7
BcaB07g32749 Brassica carinata HOM05D008316 ORTHO05D013031 2.0e-47 193.7 301 43.2
BcaC07g37291 Brassica carinata HOM05D008316 ORTHO05D005130 4.5e-47 192.6 151 70.9
BcaB05g24479 Brassica carinata HOM05D008316 ORTHO05D017243 1.9e-45 187.2 304 41.8
C08p07240 Brassica napus HOM05D008316 ORTHO05D021631 7.2e-45 185.3 129 77.5
C05p37400 Brassica napus HOM05D003554 ORTHO05D005130 3.6e-44 183.0 135 60.7
BcaC04g20935 Brassica carinata HOM05D008316 ORTHO05D005130 2.7e-36 156.8 145 77.9
C08p07220 Brassica napus HOM05D008316 ORTHO05D017243 2.0e-34 150.6 70 94.3
C09p42590 Brassica napus HOM05D008825 ORTHO05D017243 6.3e-33 145.6 71 90.1
A08p06570 Brassica napus HOM05D008825 ORTHO05D017243 1.0e-30 138.3 71 88.7
BraA08t32673Z Brassica rapa HOM05D008825 ORTHO05D017243 1.0e-30 138.3 71 88.7
BcaC08g42812 Brassica carinata HOM05D008825 ORTHO05D013031 1.7e-30 137.5 179 46.4
C09p42600 Brassica napus HOM05D041675 ORTHO05D039102 1.4e-27 127.9 126 59.5
BolC9t56607H Brassica oleracea HOM05D008825 ORTHO05D017243 2.0e-26 124.0 61 90.2
C06p00220 Brassica napus HOM05D003554 ORTHO05D005130 4.9e-25 119.4 104 53.8
BolC5t32273H Brassica oleracea HOM05D003554 ORTHO05D005130 4.9e-25 119.4 104 53.8
C03p67190 Brassica napus HOM05D003554 ORTHO05D005130 2.4e-24 117.1 80 62.5
BcaC05g27750 Brassica carinata HOM05D008825 ORTHO05D013031 5.4e-24 115.9 185 40.5
BraA07t28446Z Brassica rapa HOM05D003554 ORTHO05D005130 7.0e-24 115.5 109 51.4
C04p52520 Brassica napus HOM05D000150 ORTHO05D000108 2.0e-23 114.0 67 88.1
BraA09t38864Z Brassica rapa HOM05D003554 ORTHO05D017243 7.8e-23 112.1 53 90.6
Aa31sc129G60 Aethionema arabicum HOM05D003554 ORTHO05D005130 1.7e-22 110.9 111 50.5
BcaB06g26180 Brassica carinata HOM05D009532 ORTHO05D005130 2.9e-22 110.2 93 55.9
Carub.0007s3074 Capsella rubella HOM05D003554 ORTHO05D005130 2.9e-22 110.2 112 49.1
A07p06510 Brassica napus HOM05D003554 ORTHO05D005130 3.8e-22 109.8 109 49.5
BcaC01g04710 Brassica carinata HOM05D008825 ORTHO05D013031 5.0e-22 109.4 180 38.9
Carub.0002s1014 Capsella rubella HOM05D003554 ORTHO05D005130 1.1e-21 108.2 95 53.7
Carub.0004s0685 Capsella rubella HOM05D003554 ORTHO05D005130 4.3e-21 106.3 112 48.2
Carub.0007s0014 Capsella rubella HOM05D003554 ORTHO05D005130 6.1e-20 102.4 96 51.0
BcaNung01161 Brassica carinata HOM05D007203 ORTHO05D011558 1.0e-19 101.7 109 46.8
C07p33860 Brassica napus HOM05D004128 ORTHO05D008395 1.0e-19 101.7 184 35.3
Carub.0001s3566 Capsella rubella HOM05D003554 ORTHO05D005130 1.0e-19 101.7 96 51.0
Carub.0006s2609 Capsella rubella HOM05D003554 ORTHO05D005130 1.0e-19 101.7 96 51.0
Carub.0002s0995 Capsella rubella HOM05D003554 ORTHO05D005130 1.4e-19 101.3 96 47.9
BolC9t56577H Brassica oleracea HOM05D004128 ORTHO05D008395 1.8e-19 100.9 108 45.4
BraA03t14882Z Brassica rapa HOM05D004128 ORTHO05D008395 2.3e-19 100.5 184 34.8
Carub.0002s0983 Capsella rubella HOM05D003554 ORTHO05D005130 3.0e-19 100.1 96 50.0
C02p33250 Brassica napus HOM05D003554 ORTHO05D005130 1.2e-18 98.2 110 42.7
Carub.0278s0001 Capsella rubella HOM05D003554 ORTHO05D005130 1.5e-18 97.8 96 49.0
AL1G56530 Arabidopsis lyrata HOM05D003554 ORTHO05D005130 2.0e-18 97.4 111 41.4
AL1G56540 Arabidopsis lyrata HOM05D003554 ORTHO05D005130 2.0e-18 97.4 111 41.4
C04p26230 Brassica napus HOM05D004128 ORTHO05D008395 2.0e-18 97.4 130 39.2
BolC4t24183H Brassica oleracea HOM05D004128 ORTHO05D008395 2.0e-18 97.4 130 39.2
BcaB08g35337 Brassica carinata HOM05D003554 ORTHO05D005130 4.4e-18 96.3 94 44.7
Carub.0093s0002 Capsella rubella HOM05D003554 ORTHO05D005130 4.4e-18 96.3 104 49.0
BolC3t19531H Brassica oleracea HOM05D003554 ORTHO05D005130 5.7e-18 95.9 103 43.7
Carub.0002s0984 Capsella rubella HOM05D003554 ORTHO05D005130 1.4e-16 91.3 96 46.9
BcaB04g17553 Brassica carinata HOM05D008316 ORTHO05D014956 2.4e-16 90.5 163 42.3
Aa31sc111G40 Aethionema arabicum HOM05D003554 ORTHO05D005130 3.2e-16 90.1 107 42.1
BcaB01g02862 Brassica carinata HOM05D003554 ORTHO05D005130 5.4e-16 89.4 103 40.8
Carub.0002s1016 Capsella rubella HOM05D003554 ORTHO05D005130 5.4e-16 89.4 89 49.4
BcaB05g23503 Brassica carinata HOM05D003554 ORTHO05D008395 9.2e-16 88.6 125 36.8
Aa31sc454G20 Aethionema arabicum HOM05D003554 ORTHO05D005130 1.0e-14 85.1 94 43.6
BcaB02g06748 Brassica carinata HOM05D008316 ORTHO05D005130 1.7e-14 84.3 128 46.9
BcaB04g17902 Brassica carinata HOM05D003554 ORTHO05D005130 1.7e-14 84.3 103 37.9
BcaB07g32291 Brassica carinata HOM05D008316 ORTHO05D014956 3.0e-14 83.6 158 43.7
BcaB01g01280 Brassica carinata HOM05D003554 ORTHO05D005130 3.9e-14 83.2 94 40.4
BolC8t47837H Brassica oleracea HOM05D004128 ORTHO05D008395 3.9e-14 83.2 195 29.7
Aa31LG6G9970 Aethionema arabicum HOM05D003554 ORTHO05D005130 6.6e-14 82.4 87 44.8
Aa31sc538G10 Aethionema arabicum HOM05D003554 ORTHO05D008395 1.1e-13 81.6 101 39.6
BcaB03g16118 Brassica carinata HOM05D003554 ORTHO05D005130 1.5e-13 81.3 115 37.4
BcaC03g16254 Brassica carinata HOM05D003554 ORTHO05D005130 1.9e-13 80.9 99 40.4
BolC3t13324H Brassica oleracea HOM05D003554 ORTHO05D008395 1.9e-13 80.9 103 39.8
BcaB02g10637 Brassica carinata HOM05D003554 ORTHO05D005130 2.5e-13 80.5 99 41.4
BraA09t38862Z Brassica rapa HOM05D008316 ORTHO05D018797 2.5e-13 80.5 85 90.6
BcaB07g31822 Brassica carinata HOM05D003554 ORTHO05D032345 3.3e-13 80.1 107 34.6
BcaB03g16128 Brassica carinata HOM05D003554 ORTHO05D005130 4.3e-13 79.7 108 38.0
BcaB08g35293 Brassica carinata HOM05D003554 ORTHO05D005130 9.5e-13 78.6 135 31.9
THA.LOC104809668 Tarenaya hassleriana HOM05D003554 ORTHO05D005130 9.5e-13 78.6 84 48.8
THA.LOC104823081 Tarenaya hassleriana HOM05D003554 ORTHO05D005130 9.5e-13 78.6 103 43.7
BcaB02g11541 Brassica carinata HOM05D003554 ORTHO05D005130 1.2e-12 78.2 108 37.0
THA.LOC104820187 Tarenaya hassleriana HOM05D003554 ORTHO05D005130 1.2e-12 78.2 103 39.8
AL2G17330 Arabidopsis lyrata HOM05D003554 ORTHO05D008395 1.6e-12 77.8 103 38.8
BcaB02g11366 Brassica carinata HOM05D007984 ORTHO05D013027 1.6e-12 77.8 91 40.7
BcaB04g17410 Brassica carinata HOM05D003554 ORTHO05D005130 1.6e-12 77.8 108 37.0
Aa31sc347G20 Aethionema arabicum HOM05D003554 ORTHO05D005130 2.8e-12 77.0 117 37.6
THA.LOC104800374 Tarenaya hassleriana HOM05D003554 ORTHO05D005130 1.0e-11 75.1 81 42.0
THA.LOC109116563 Tarenaya hassleriana HOM05D003554 ORTHO05D005130 2.3e-11 73.9 94 36.2
Aa31LG6G9990 Aethionema arabicum HOM05D003554 ORTHO05D005130 3.1e-11 73.6 102 38.2
Carub.0003s2756 Capsella rubella HOM05D003554 ORTHO05D005130 3.1e-11 73.6 76 47.4
THA.LOC109117170 Tarenaya hassleriana HOM05D003554 ORTHO05D005130 6.8e-11 72.4 94 37.2
C09p52720 Brassica napus HOM05D004128 ORTHO05D008395 8.9e-11 72.0 86 39.5
BolC7t42791H Brassica oleracea HOM05D008825 ORTHO05D005130 8.9e-11 72.0 32 93.8
THA.LOC109116427 Tarenaya hassleriana HOM05D003554 ORTHO05D005130 8.9e-11 72.0 90 40.0
Aa31LG10G9040 Aethionema arabicum HOM05D003554 ORTHO05D005130 1.2e-10 71.6 116 34.5
BolC6t38472H Brassica oleracea HOM05D004128 ORTHO05D008395 1.2e-10 71.6 86 39.5
THA.LOC104821166 Tarenaya hassleriana HOM05D003554 ORTHO05D005130 1.2e-10 71.6 177 30.5
THA.LOC104807864 Tarenaya hassleriana HOM05D003554 ORTHO05D015748 1.5e-10 71.2 177 30.5
THA.LOC104825259 Tarenaya hassleriana HOM05D003554 ORTHO05D005130 1.5e-10 71.2 107 35.5
C03p79390 Brassica napus HOM05D017905 ORTHO05D018718 2.0e-10 70.9 140 52.1
BolC9t55613H Brassica oleracea HOM05D004128 ORTHO05D008395 2.0e-10 70.9 86 38.4
C03p49780 Brassica napus HOM05D004128 ORTHO05D008395 7.5e-10 68.9 86 38.4
Aa31sc182G60 Aethionema arabicum HOM05D003554 ORTHO05D008395 9.8e-10 68.6 121 36.4
BraA07t30708Z Brassica rapa HOM05D004128 ORTHO05D008395 1.3e-09 68.2 86 38.4
BraA10t42724Z Brassica rapa HOM05D004128 ORTHO05D008395 1.3e-09 68.2 86 38.4
Carub.0003s3367 Capsella rubella HOM05D003554 ORTHO05D005130 1.3e-09 68.2 94 38.3
THA.LOC104799670 Tarenaya hassleriana HOM05D003554 ORTHO05D005130 1.3e-09 68.2 94 34.0
THA.LOC104807874 Tarenaya hassleriana HOM05D003554 ORTHO05D005130 1.3e-09 68.2 94 34.0
THA.LOC104811336 Tarenaya hassleriana HOM05D003554 ORTHO05D005130 1.3e-09 68.2 94 34.0
THA.LOC104807807 Tarenaya hassleriana HOM05D003554 ORTHO05D005130 1.7e-09 67.8 94 34.0
BcaB01g01318 Brassica carinata HOM05D004128 ORTHO05D008395 2.9e-09 67.0 45 62.2
BolC2t07285H Brassica oleracea HOM05D004128 ORTHO05D008395 2.9e-09 67.0 86 37.2
THA.LOC104803192 Tarenaya hassleriana HOM05D003554 ORTHO05D005130 3.7e-09 66.6 94 33.0
THA.LOC104810514 Tarenaya hassleriana HOM05D003554 ORTHO05D005130 4.9e-09 66.2 83 43.4
BolC8t50772H Brassica oleracea HOM05D004128 ORTHO05D008395 6.4e-09 65.9 86 37.2
THA.LOC104798881 Tarenaya hassleriana HOM05D003554 ORTHO05D005130 6.4e-09 65.9 93 33.3
BcaB01g01146 Brassica carinata HOM05D003554 ORTHO05D005130 8.3e-09 65.5 62 46.8
C02p57980 Brassica napus HOM05D017905 ORTHO05D017243 8.3e-09 65.5 39 71.8
C06p16380 Brassica napus HOM05D017905 ORTHO05D018718 8.3e-09 65.5 131 53.4
BcaB08g35951 Brassica carinata HOM05D035459 ORTHO05D092148 1.4e-08 64.7 59 61.0
C04p23890 Brassica napus HOM05D004128 ORTHO05D008395 2.4e-08 63.9 86 37.2
BcaB06g27695 Brassica carinata HOM05D008316 ORTHO05D018718 3.2e-08 63.5 104 63.5
BolC3t20187H Brassica oleracea HOM05D017905 ORTHO05D018718 3.2e-08 63.5 89 50.6
Aa31LG10G9030 Aethionema arabicum HOM05D003554 ORTHO05D008395 1.6e-07 61.2 56 51.8
Aa31LG11G8070 Aethionema arabicum HOM05D003554 ORTHO05D005130 2.0e-07 60.8 116 32.8
C05p06190 Brassica napus HOM05D003554 ORTHO05D005130 3.5e-07 60.1 72 41.7
BolC1t02083H Brassica oleracea HOM05D017905 ORTHO05D018718 3.5e-07 60.1 128 52.3
THA.LOC104798704 Tarenaya hassleriana HOM05D003554 ORTHO05D005130 3.5e-07 60.1 72 36.1
BcaB02g10458 Brassica carinata HOM05D008316 ORTHO05D018718 4.6e-07 59.7 47 70.2
C02p40540 Brassica napus HOM05D007984 ORTHO05D014515 4.6e-07 59.7 46 58.7
C06p22750 Brassica napus HOM05D008316 ORTHO05D018797 4.6e-07 59.7 68 91.2
BcaB03g16082 Brassica carinata HOM05D026233 ORTHO05D005130 1.0e-06 58.5 68 42.6
BcaB08g35391 Brassica carinata HOM05D003554 ORTHO05D005130 1.3e-06 58.2 121 30.6
C06p01800 Brassica napus HOM05D004128 ORTHO05D008395 1.7e-06 57.8 86 34.9
BolC4t26072H Brassica oleracea HOM05D008316 ORTHO05D018797 2.3e-06 57.4 68 91.2
THA.LOC104821507 Tarenaya hassleriana HOM05D003554 ORTHO05D005130 3.9e-06 56.6 102 33.3
THA.LOC104827521 Tarenaya hassleriana HOM05D003554 ORTHO05D005130 3.9e-06 56.6 67 43.3
THA.LOC104798651 Tarenaya hassleriana HOM05D003554 ORTHO05D015748 5.0e-06 56.2 103 34.0
Thhalv10000512m.g Eutrema salsugineum HOM05D003554 ORTHO05D005130 6.6e-06 55.8 56 44.6
BNapus_Darmor_BZH_scaffold_167p00060 Brassica napus HOM05D003554 ORTHO05D005130 8.6e-06 55.5 72 40.3


User provided reference genes

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